KEGG   Betta splendens (Siamese fighting fish): 114857197
Entry
114857197         CDS       T08231                                 
Symbol
skic8
Name
(RefSeq) SKI8 subunit of superkiller complex protein
  KO
K12602  WD repeat-containing protein 61
Organism
bspl  Betta splendens (Siamese fighting fish)
Pathway
bspl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bspl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    114857197 (skic8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bspl03019]
    114857197 (skic8)
Messenger RNA biogenesis [BR:bspl03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     114857197 (skic8)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd WD40_CDC20-Fz Beta-prop_WDR90_POC16_2nd WDR55 WD40_Gbeta Beta-prop_WDR36-Utp21_1st EIF3I WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_SCAP Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_Aladin Beta-prop_ACSF4 Beta-prop_RIG_2nd Beta-prop_Vps41 Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N eIF2A Beta-prop_EIPR1 Beta-prop_WDR41 WD40_RFWD3 Beta-prop_NWD2_C Beta-prop_VPS8 Tricorn_2nd Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_IFT140_1st Ge1_WD40 Beta-prop_Nup120_160 NBCH_WD40 PROPPIN Beta-prop_NUP159_NUP214 Cytochrom_D1 WDR54 Beta-prop_WDR75_2nd WD40_like VPS8_N Beta-prop_pof12 Vgb_lyase Beta-prop_IFT122_2nd Nucleoporin_N Chorion_S16 DUF2415
Other DBs
NCBI-GeneID: 114857197
NCBI-ProteinID: XP_029009266
UniProt: A0A6P7MQU4
LinkDB
Position
6:16694762..16699200
AA seq 305 aa
MSTQYSILFKQEHAHDDAIWTTAWGKSEADGSETIVTGSLDDMVKVWKWSDEKLELLWTL
EGHQLGVVSVDISHNGAIAASSSLDAHIRLWDLESGKQIKSMDAGPVDAWTVAFSPDSKY
IATGSHLGKVNTFGVESGKKEFSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATG
KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAF
SPDNTHFVSSSSDKSVKVWDASSRACINTFFDHQDQVWSVKYNSTGSKIISAGDDRAIHI
YDCPM
NT seq 918 nt   +upstreamnt  +downstreamnt
atgagcacacaatacagcattcttttcaagcaagagcatgcacatgatgatgctatttgg
acaacggcgtggggtaaaagtgaggcagatgggtctgaaactattgtcactggctcgttg
gatgatatggtgaaagtctggaaatggtcagacgagaagctggagctgctgtggactctg
gaaggccaccagctgggtgtggtgtcggtggacatcagtcataatggggcgatcgcagcc
tccagctccctagacgcacacatacgtctctgggatctggagtctggaaagcagatcaag
tctatggatgctggaccagttgatgcgtggacagttgctttttctccagactctaaatac
attgccacaggaagccaccttggaaaagttaacacctttggtgtggaaagtggcaaaaag
gaattttccctggatactcgaggaaaattcatcctgagtattgcttacagtcctgatggg
aaatatttagccagcggagccattgatggaattatcaacatctttgacatcgccactggg
aaactactccacacgctggaaggtcatgctatgccaatcagatccctcaccttctcccca
gactctcagctcctcgtcacagcctcagacgacggctacataaagatatacgacgtgcaa
catgccaacttggctggaacactgagcgggcacggatcatgggtgcttaatgtggccttc
tccccagataacacccactttgtctcaagctcgtctgacaagagcgtgaaggtttgggac
gccagctccagagcctgcatcaacaccttctttgaccaccaggaccaggtgtggagcgtg
aagtacaatagcactggctccaagatcatttctgctggagacgaccgcgccatccacatc
tacgactgtcccatgtga

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