Betta splendens (Siamese fighting fish): 114857200
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Entry
114857200 CDS
T08231
Symbol
lingo1a
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1 isoform X2
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bspl04131
]
114857200 (lingo1a)
Membrane trafficking [BR:
bspl04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
114857200 (lingo1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
LRR_1
I-set
Ig_3
ig
LRR_9
Ig_2
LRR_Zer-1
LRRNT
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
114857200
NCBI-ProteinID:
XP_029009269
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Position
6:complement(16404658..16537810)
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AA seq
615 aa
AA seq
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MAAGEATGHSYLVACWQPILILMLGTVLSGSTTGCPSRCECNVQERSVMCHRKKLMTVPE
GIPQETKLLDLSKNRIRTINPDEFANFPNLEHLELSENTISTIEPGAFNNLYGLRTLGLR
SNKLKLIQLGVFTGLSNLTQLDISENKIVILLDYMFQDLYNLRSLEVGDNDLVFISHRAF
HGLSSLEHLSLEKCNLSSVPTEAFTHLHSLVTLRLRLLNINVIRDYSFKRLYRLKVLEIA
NWPFLDTMTPNCLYGLNLTSLTIANANLTTIPYVALRHLVYLRFLNLSYNPIHTIEGNKL
HDLLRLQEFHLVGGRLAMIEPYSFRGLNYLKILNVSGNSLSTLEESAFHSVGNLETLALY
DNPLACDCRLLWVFRRRWRLNFNRQQPTCASPEYVQGKEFKDFPDVLQPNYFTCRKSRIR
DRKAQQKFVDEGAIVHFACQADGDPAPVIMWLSPQKKFVTTKTIGRLSVLPDGTLEVRYA
QIQDNGTYVCIASNAGGNDTSLAHLHIHSYSPDWPHQPNKTFAFISNQPQETGANGTRAN
VPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPRKSDAGMS
SSTVDAPRKFNMKMI
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggcggccggggaagcgactgggcacagctacctggtggcttgctggcagcccatcctg
atcttgatgctgggaaccgtgctgtccggctccaccacaggctgcccgtcccgctgcgag
tgcaatgttcaggagcgctctgtgatgtgtcaccgcaagaagctcatgacagtccctgag
ggcattcctcaggagacaaaactgctggacctcagcaagaaccgtatcagaaccatcaac
cccgatgagttcgccaacttccctaacctcgagcacctggagctcagtgaaaacacgatc
tctaccattgaacctggggcgtttaacaacctttatggcttgcggacactggggctacgt
agcaacaagcttaagctgatccagcttggtgtcttcacaggcctgagtaatctcacgcag
ctggacataagtgagaacaagattgtcatcctgttagactacatgttccaggatttgtac
aatctccggtctttagaagtgggcgacaatgacctggttttcatctcccaccgagctttt
catggcctgagtagtcttgaacacctaagtcttgagaagtgcaacctgtcctctgtgcca
acagaggcttttacccacctccacagtttggtcactcttaggctgcgcctccttaacatc
aatgtcatacgggattactccttcaaacggctttatcgtctgaaagtgttggaaatagcc
aattggccatttttggataccatgaccccaaattgcttgtatggattaaacctcacatcc
ctgaccattgcaaatgccaatctgaccacaatcccttatgtagccttgcggcacttggtt
tacctgcgctttcttaatctttcctataatcctatccacaccattgaaggaaataagctg
catgatctcctgcgtctgcaggagtttcacctggttggaggcagactggcaatgatagag
ccctactccttccgtggtctaaactatctgaagattctaaatgtgtctgggaactctctt
agcactttagaggagtccgccttccattcggttgggaacctggaaacccttgccttgtat
gataatcccctggcctgcgactgccgactgttatgggttttccgacgccgctggagactg
aacttcaacaggcagcagccgacctgcgcctccccagagtatgtccaaggcaaagaattc
aaagacttcccggatgttctgcagccaaactacttcacctgtcgcaaatctaggatcaga
gatcgcaaagcccagcagaagtttgtcgatgagggagccatcgttcatttcgcttgccag
gcagatggagatcctgcaccagtgataatgtggctatccccacagaaaaagtttgtcacc
accaagacgattggaaggctctccgtgttgccagatggtaccctcgaggtgcgctatgct
cagattcaagacaatggtacttatgtgtgcatagccagcaatgccggtggaaatgacact
tctcttgctcacctgcacattcatagctactcgcctgattggccgcaccagcccaacaag
acttttgccttcatctccaaccagccccaagaaactggtgctaatggtacgagagccaat
gtccctttcccctttgatataaagacactgatcattgccactacaatgggcttcatttca
tttctcggtgttgtcttgttttgcctggtactgctattcctgtggagcagagggaaaggc
aacacgaagcacaacatcgagatcgagtatgtgccacggaaatcagacgctggcatgagc
agcagcacagtggatgctccccgcaagttcaacatgaaaatgatttaa
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