Betta splendens (Siamese fighting fish): 114857300
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Entry
114857300 CDS
T08231
Symbol
roraa
Name
(RefSeq) nuclear receptor ROR-alpha A isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bspl03000
]
114857300 (roraa)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
bspl03310
]
114857300 (roraa)
Transcription factors [BR:
bspl03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
114857300 (roraa)
Nuclear receptors [BR:
bspl03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
114857300 (roraa)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
114857300
NCBI-ProteinID:
XP_029009495
UniProt:
A0A6P7MTG1
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Position
6:11988738..12166708
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AA seq
519 aa
AA seq
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MESPPDPASDPGNSASEPATPVRETPVNLETLRKADHPAPVRRQTCSSTNRGISVTKKTH
TSQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNAAYSCPRQKNCLIDRTSRNR
CQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRLQQQQRDHQQQPGEAEPLTP
SYGLSANGLTELHDDLSGYMDGHTPDGSKPDSAVSSFYLDIQPSPDQSGLDINGIKPEPI
CDFAPGSGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHMETCQYLREELQQMTWQAFL
QEEVESYQSKPREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVV
FVRMCRAFDSQNNTVYFDGKYAGPDVFKSLGCDDLISSVFEFGKNLCSMHLSEDEIALFS
AFVLMSADRSWLQEKVKVEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTLRALCSRH
TEKLTAFKAIYPDIVRAHFPPLYKELFGSDFEQSMPVDG
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggagtcccctccagatccagcgagcgacccgggcaacagcgcctcggagccggctacc
ccggtcagggaaaccccggtaaacctggagacgctccggaaagcggaccatccagccccg
gttcgaaggcagacctgctccagcaccaacagaggtatctcagtaacaaagaagacacat
acttctcaaatcgaaataattccctgcaagatctgtggagacaaatcatcaggcatccat
tacggcgtgataacatgtgaaggctgtaagggtttcttcaggaggagtcaacagagcaat
gcagcctactcctgcccccgtcagaagaactgcctgatcgaccgcaccagccgcaaccgc
tgccagcactgccgtctgcagaagtgcctggcagtgggcatgtcacgagacgcggtgaag
ttcggccgcatgtccaagaagcagcgcgacagtctgtacgctgaggtccagaagcaccgg
ctgcagcagcagcagcgtgaccaccagcagcagcccggggaggcggagccgctcacaccc
agctacggcctgtcagccaacggcctcacggagctgcacgacgacctcagcggctacatg
gacggacacaccccggacggcagcaagcccgactcggccgtcagcagcttctacctggac
atccagccgtcccccgaccagtcgggcctggacatcaacggcataaagccggagcccatc
tgcgacttcgcccccggctccggcttcttcccctactgctccttcaccaacggcgagacc
tcccccaccgtgtccatggctgaactagagcacctggcccagaacatctccaagtcacac
atggagacatgtcagtacctgcgggaggagctgcagcagatgacctggcaggccttcctg
caggaggaggtggagagctaccagagcaagccccgggaagtcatgtggcagctgtgcgct
atcaaaatcacggaggccatccagtacgtggtggagttcgccaagcgcatcgacggcttc
atggagctgtgtcagaacgatcagatagtgctgctgaaagcaggctctttggaagttgtg
tttgtcagaatgtgccgtgcctttgactcgcaaaacaacacagtctattttgatggaaaa
tatgccggacctgatgtgttcaagtcattaggctgtgacgacttgatcagctccgtcttc
gagtttgggaaaaacttgtgttctatgcacctgtctgaggatgagatcgccctgttctcc
gcctttgtgttgatgtctgctgaccgatcctggctccaggagaaggtgaaggtggagaag
ctgcagcagaaaatccagctcgccctccagcatgtgctgcagaagaaccacagagaggac
ggcattctcacaaagttgatatgcaaagtgtcaacactgcgagcgctgtgcagcaggcat
acagagaagctcacggctttcaaagcaatatacccagacattgtgcgtgcccacttcccc
cccttatacaaggagctgttcggatcagactttgagcagtccatgcccgttgacgggtag
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