Betta splendens (Siamese fighting fish): 114857472
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Entry
114857472 CDS
T08231
Symbol
edc4
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114857472 (edc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bspl03019
]
114857472 (edc4)
Messenger RNA biogenesis [BR:
bspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114857472 (edc4)
mRNA degradation factors
5'-3' decay
Decapping complex
114857472 (edc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
Beta-prop_TEP1_2nd
WDR55
CelTOS
Pdc1_Ge1
Motif
Other DBs
NCBI-GeneID:
114857472
NCBI-ProteinID:
XP_029009818
UniProt:
A0A6P7MU20
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All DBs
Position
6:complement(3735871..3753072)
Genome browser
AA seq
1383 aa
AA seq
DB search
MASNSDIDIEGATQHLRDILKLDRPGNGTDVQSSDGQRKPSFNGELNGLLGAGLLGSTDL
PTMSESSRPISTDISNSQESQIICLSGDDGSTCIPIISNNVEIVASQDSSIKSKARGSNK
VKIQPVAKYDWEHKYYYGRLIAVSNSFLAYAIRGANNHAMIRVLSLGSAERSLLKGFTGA
VTDLAFAHLDSSLLGCVDEAGNLMVWQLTCTESKILDQIVIHIRQPEDTPLNSHRRLIWC
PYILDDNEENQDDTSQTLALLHEDRAEVWDLEVLRTNNSSWPVDATELKEGLITIKGHTQ
RVSEGALSPDGTVLATASHDGYIKFWQIYIEGGQDKPRCLHELRPHGGCPLSCLLFCDNH
KRQDPDVPFWRFLITGADQNQELKMWCTVSWTCLQTIRFSPDPFNSTALPSLKASLDLSA
EYLILTDVQRKVLYVMELRQDLEKGKASFTAVSEFLLTHPVLSFGVRDVTTSRLRHTEVL
PAEEESESMTTEGTQGPTESKSGIQIKLYCVHTKSLQDVQIWFQPNVGSSSVACLPHSDS
HDGLAGLSDHLTDQSSDKESGSGSQTDLRKIPCLPAPADFLSNSAPISGPMPKLMTPDAF
MTPSSVPASPGSSASSLTIVTAISSNSDSTNRAIDDVTQSPNRLDNSSSCSLALSASTSS
PRVASAVLLPGLENLQVLVPSSPLTLENPQVLDSPLLPHLSSPTRARSPDVISSASTAMS
QDTLQLQRGLVSSLEPIQLSALQTDSMASAASALHLLTSPRAVNNSLLPLELGGADGAVG
GVVESEPRLSHTPSLLENALSQESPGVGGGSSDGSIGHTPWPAAPDITRETRNSLRDNGL
GDCSREEPKDRHMSSPYHRRSYHLTQNESQDAVAEQSDPDDEVASLASSTGNCGARSAHR
LPVKDWKTSPRGSPKLKRKSKKDDSELTRLRQMDSSQMSTEAQDELLILLRSQQRELNEL
RVQIEAMQSSIVAQVEHVLTNHQEQEQRRLERVLAERQNHQQQLHEHLSQQLSQALNSAL
TNRMDKVLREEIKKTVPQTISKSLEPVTGQLSNTIASKLTAVEVTLKDNVTKVVKSKNTT
DAIGRAAAEAMQGPIQAAYKDAFQSIVLPVFERGCQSMFQQINDSFKQGTQEYIQQLETH
LKNRRQREQDTRDPVISQLQQMIDSFQSSTDQLANNITATVRAEVQNQVQLMVGNLQESI
LSHVQKIVKGEVSLAMKEQQAVVTSSIMQAMRSAAGTPVPTAHLDYQTQQANILQLLQQG
QLNQAFQQALSATDLNLVLYVCETIDSQQVFGQHPCPLSQPVLLSLIQQLSSNLTTRSEL
KISYLEDAVMNLDHSDPLTRDHMSSVLAQVRPKLLVFLQQDPHSPVNKRARRLVMMLQGL
VNH
NT seq
4152 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccaattctgatatagatatagaaggtgccacccagcatctccgggacatcctc
aagctcgaccgtcccggaaacggcactgatgtacagtcaagtgacggtcaacgaaaacca
tcctttaatggagagctcaacgggttattgggagcaggccttttaggaagcacggatctg
ccaacaatgtctgaatccagcagacccatttccacagacattagcaactctcaggagagt
cagattatctgtctctctggtgacgatggttccacttgtatccctattatctccaacaat
gtggagattgtggcgagtcaagactctagcatcaaaagcaaagcccgaggcagcaacaag
gtaaagattcaacctgttgctaagtatgactgggaacacaagtattattatgggagactg
attgctgtatccaactcttttttggcctatgccattagaggagccaacaatcatgctatg
attcgggtcttgagtctggggtctgctgagcgatccctactgaaggggttcactggtgca
gtcacagatttggctttcgctcaccttgactcctccctgctcggctgtgtagatgaagca
gggaacctcatggtctggcagctcacttgcactgaaagcaaaatactagatcagatagta
attcatattagacaaccagaagacactccactgaactctcatcgtcgtctcatctggtgc
ccatacatcctggatgataatgaagagaatcaggatgacaccagccagactttggccctt
ttacatgaagacagggcagaggtttgggaccttgaagtcctaagaaccaacaacagcagt
tggccagttgatgccacagaactgaaagaaggtctcatcacaatcaaggggcacacacag
cgggtcagtgaaggggccctgtctccagatggaactgtgttagccacagctagccatgat
ggatacatcaagttctggcagatatacatagaggggggacaggacaaacccagatgcctt
cacgagttgcgccctcatggaggatgtcccctatcctgccttcttttctgtgacaaccac
aagaggcaggatccagatgttcctttctggcggttccttataactggagcagatcagaat
caggagttgaagatgtggtgtactgtttcttggacctgtttacagactatcaggttttct
ccagatccattcaactccacagctctgccaagtctgaaagccagtctggatctttctgct
gagtacctcattctcacggatgtgcagagaaaggttctgtatgtgatggagctgcgacag
gacctagagaaaggaaaggccagttttactgctgtgtcagagttcctgctgacacatcct
gtgctcagctttggtgtccgggatgtcacaacaagccgattgcgacacaccgaggtcctc
cctgcagaggaggagagtgagagcatgacgacagagggcactcaaggaccaacagagtcc
aaatctgggatacagattaaactctactgtgttcacaccaagagcctgcaggatgtccag
atctggttccagcccaatgtgggttccagctctgtagcctgcctgcctcactcggattct
catgacggtttagctgggttgtcagatcatctcactgaccagagctctgacaaggagtca
ggaagtggctctcagacggaccttaggaagattccatgtcttcctgctcctgctgatttt
ctctcaaactctgcccccatcagtgggccgatgcctaagttgatgactcctgatgccttc
atgacaccaagttcggtcccagcctcaccaggcagcagcgccagtagtctcaccattgta
acagccatcagtagtaactctgactcaactaacagagctatagatgatgttactcagagt
ccaaatagactggacaacagcagtagttgcagtttggcactttctgcctccactagcagc
ccaagagttgcttctgctgtactcttgcctggactggagaacctacaggtgttggttcct
agcagccctcttacacttgaaaaccctcaggtcctggactctcccctcctgccacatctc
tcctctccaaccagggcccgctcccctgatgtcatctcttcagcctctacagctatgtcc
caggacacactgcagcttcagcgcgggttggtgtccagtttggaacccatacaactttct
gctctccagacagacagtatggcctctgctgcctctgctcttcacctgctcacttcacca
cgtgcagtcaacaacagcctgttgcctcttgagcttggaggtgcagatggggcagtgggt
ggggtagtggagtcagagcctagactcagccacacaccatctctgcttgagaatgcctta
tcgcaggagagccctggggtgggaggagggtcctcagatgggagtattggccacacacct
tggccagctgcacccgatattaccagagaaaccaggaacagtctcagggacaacggcctt
ggagactgttcaagagaggagccaaaggacagacacatgagctcaccataccatcgacgt
tcatatcacctgacacagaatgaaagtcaggatgctgttgcagagcagagtgatcctgat
gatgaggtggcaagcctggcgtcctccacagggaactgtggcgctcgctctgcacacaga
cttccagtcaaggattggaagacctcaccacgaggttcgccgaagctcaagaggaagagc
aagaaagacgacagtgaattaactcggttacgacaaatggactcaagtcagatgagcaca
gaagcacaggacgagctgttgattctcctgcgcagccagcagagggagttaaatgagctg
cgtgtacagattgaagccatgcagagctccattgtagctcaggtggagcatgtcctcact
aaccaccaggagcaagagcagcgcagactagaacgagttctggcagagcgtcagaatcac
cagcagcagcttcatgaacacctcagccagcagctcagccaagccctcaactcggccctc
actaacagaatggacaaagtgctacgggaggagatcaagaaaacagtaccacagacaatc
tccaaaagtctggagcctgtgacaggccaactgagcaacacaattgcttctaagctgact
gctgtggaagtcaccctgaaggacaatgtcaccaaagtggtcaaatccaagaatacaaca
gatgcaattggtcgagcagcagctgaagcgatgcaaggccccatccaggcagcctataaa
gatgcattccagagcatcgtgctgcctgtttttgagagaggctgtcagtccatgtttcag
caaatcaatgacagcttcaagcaaggaacacaagaatacatccagcagcttgagacccat
cttaagaacagaaggcagagggagcaggacacacgagaccccgtgatcagccagctccag
caaatgatcgacagcttccaaagctccactgatcagctggccaataacatcacagctact
gtccgggcagaggtccagaaccaggtccagctgatggtgggaaatttgcaggagtctatt
cttagtcatgtgcagaaaattgtcaaaggagaggtgagcctggcaatgaaggagcagcag
gcagtggtcacctccagcatcatgcaggcgatgaggtcagcggctggcacgcccgttccc
actgctcacctagactaccagacacagcaggccaacatcctgcagctcctccagcagggc
cagctcaaccaggccttccagcaggcgctgtcagcaaccgatttgaacttggtcttgtat
gtgtgtgagaccatcgactctcagcaggtgtttggtcaacacccctgtcccctcagccaa
cccgtgttgctgtcactcatccagcaactctcctccaacctcacaacccgctctgagctc
aagatcagctaccttgaggatgcagtgatgaacttggaccacagcgaccccctgaccaga
gatcacatgtcgtccgtgttggctcaggttagaccaaaactcctggtcttcctgcagcag
gacccgcacagcccagtcaacaagagggcgcggcgcctggtgatgatgctgcagggcctc
gtcaaccactag
DBGET
integrated database retrieval system
