Betta splendens (Siamese fighting fish): 114857573
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Entry
114857573 CDS
T08231
Symbol
myo5c
Name
(RefSeq) unconventional myosin-Vc isoform X1
KO
K10357
myosin V
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
114857573 (myo5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bspl03019
]
114857573 (myo5c)
04131 Membrane trafficking [BR:
bspl04131
]
114857573 (myo5c)
03029 Mitochondrial biogenesis [BR:
bspl03029
]
114857573 (myo5c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
bspl04812
]
114857573 (myo5c)
Messenger RNA biogenesis [BR:
bspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
114857573 (myo5c)
mRNA cycle factors
P-body specific factors
114857573 (myo5c)
Membrane trafficking [BR:
bspl04131
]
Others
Actin-binding proteins
Myosins
114857573 (myo5c)
Mitochondrial biogenesis [BR:
bspl03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
114857573 (myo5c)
Cytoskeleton proteins [BR:
bspl04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
114857573 (myo5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
Csm1_N
AAA_16
AAA_22
Motif
Other DBs
NCBI-GeneID:
114857573
NCBI-ProteinID:
XP_029010008
EnsemblRapid:
ENSBSLG00000004509
UniProt:
A0A6P7MUK8
LinkDB
All DBs
Position
6:complement(13516682..13526076)
Genome browser
AA seq
1742 aa
AA seq
DB search
MALLELYTQFNRVWIPDAEHVWKSAEIIRDFNNGDNVLVLHLDDGTEHHHPVDPSKPQLP
PLRNPDILVGENDLTALSYLHEPAVLHNLKVRFMESRIIYTYCGIILVAVNPYKQLHIYG
DAIIHAYSGQNMGDMDPHIFAVAEEAYKQMARNHKNQSIIVSGESGAGKTVSARYAMRYF
AVVSKSGSKSRVEDKVLASNPITEAIGNAKTTRNDNSSRFGKYTEISFDKQYRIMGANMR
TYLLEKSRVVFQAENERNYHIFYQMCSCAHLDKFKNLRLSTADRFKYTCMGGDITIEGVN
DKADMEETLRTFSLLGLKEDFQSDVFKVLAAILHLGNVEIKSSGDEKSSVPRSDPHLAVF
CELLGVGVEGLVRWLCHRRIVLVAETVVKPVPKERAVNARDALAKRIYAHVFDCIINTIN
AALKVPGKQHAFIGVLDIYGFETFDINSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKE
DIPWTLIDFYDNQPVIDLIEAKLGILDLLDEECLFPQGTDQSWLQKLYNYLEANPLFEKP
RLSNEAFVIQHFADKVEYQCGGFLEKNRDALFEELLDVMRDSKFRFLANVFQEDDDGSVN
SKGVKVRAARPGVKPANKQLRTSVGDKFRSSLSLLMETLNATTPHYVRCIKPNDEKLPFE
YDSRRVVQQLRACGVLETIRISAQSYPSRWTYIEFYSRYSILMSPQEAIVNDKKQACKNV
LPRLIQDSNQYKFGRTKIFFRAGQVAYLEKRRLDRLRGACVTIQKHVRGWSQRRAYLRLR
GAAVVLQQYIRGKRTIRKTVSAATLKRGWAAVVIQRYWRGYRMRQIYQVVRLASVTIQAF
TRGWIARKRFRKMMEEHKVLVLQKYARAWLARRRFQTMRRLVLNVQLSYRVQQLRKKIED
QNKENCGLVERLTSLASTHSQTVDRLQGLEVQMEKLSSQKAAVESREKKVKEDAASAIAQ
LQRAINALSLEKEKVEKQFEDSTKETKENFDQIKRSLQDEKENETRLRKIAENNIELQRQ
DHEKEVETLKDEIKRLKEERVGLQRQMEEGGQVNSDLQEQVLQLSKHVKAIPELRKDLNS
LQNQKNSMDRKMKEQSEQATAKLKDVTRQLLGGVVEEQVLLGLISDDSEKIYEVEDLQAA
FEGLQKATRILEHHRKEQKESYETQVEGLTYKVDHLQNENSRLQDLFQEKSNVNEKIRQE
VSRLSSENAIIPELKLQVSELNRQKQELEAQVEEKTREIAEKNEEISNTLQKKIMEESSK
RRHFENRAAELEELKRELQGQVEELEEENEHLKRQQMMESEARSKLRQETSRLAAENMDC
EEQLDQKDRLIKKLQNQIKSLESSQRAKQTYSPAVPKDYLGMLEYKREDEARLIQNIILD
LKPKGVVVSMIPVLPAYILFMCVRHADYLNDDAKLKSLMNAIINGIKKVIVSYHKDFELL
SFWLSNMYQLLNCLKQYSGEEEFMKQNTPRQKKNCLQNFDLSEHRQILSDLAIHIYHQFI
SIMEKALAPSIVPGMLEHESLQGISSMKPTGFRKRSNSLYEDSETSTISTIIQQLGSFHS
TMTQHGMEQGLIKQAVKQLFFLVGATALNHIMLRKDMCSCRKGMQIRCNISYLEEWLKEK
ELQNSNAIDTLRPLSQAAWLLQVNKSTDDDAKEIAEKCTELSPVQIVKILNSYTPIDDFE
KRVSSSFVRKVQSSLQDREGSTQLMLDTDYRFQVTFPFCPSSQALELLQVPSSLHLGFLT
RI
NT seq
5229 nt
NT seq
+upstream
nt +downstream
nt
atggctttgttggaactgtacacccagttcaacagagtgtggattccagatgccgaacac
gtgtggaagtcagcagagattataagggattttaataatggggacaatgttcttgttttg
caccttgacgatggcactgagcaccaccaccccgtcgacccctctaaaccccagcttcct
ccactccgcaatccggacatcttggtcggggagaacgacctcacggctctcagctacctg
cacgaacccgctgtgctgcacaacctcaaagtgcgattcatggagtccaggatcatctac
acctactgtggtattatactggtggctgtaaacccatacaaacagctccatatctacgga
gatgcaatcattcatgcctactcaggccagaacatgggagacatggaccctcatatattt
gcagtggcagaggaggcctacaagcagatggccagaaaccacaagaaccagtctatcata
gtcagcggtgagtccggagcaggcaagactgtgtctgcacgatacgcgatgagatacttc
gctgttgtaagcaaatctggcagcaagagtcgggtggaagacaaggtcctggcgtccaat
ccaataacagaggccataggcaacgcaaagaccaccaggaatgacaacagcagccgattt
gggaaatacactgagatcagctttgacaagcagtaccggatcatgggcgccaacatgaga
acctatctcttagagaaatccagggttgtttttcaggcagagaacgagcggaattatcac
attttctaccagatgtgttcctgtgctcacctggacaagttcaagaacctaagactttca
actgcagatcgcttcaagtacacctgcatgggcggagacatcaccattgaaggcgtgaat
gacaaagccgacatggaggagacgctgcggaccttctccctgctgggattgaaggaggac
tttcagtcagacgttttcaaagttttggcagcgattcttcacttaggaaatgtggaaatc
aaaagctcgggagatgagaaatcttcagttccccgcagcgatccacacctggcagtgttc
tgtgagctgctgggagtcggtgtggagggcctggtgcgctggctgtgccaccggaggatt
gttctggtggccgagacggtggtgaagccggttcccaaggagcgagcggtgaacgccagg
gacgctctggctaaacggatctacgcccacgtgtttgactgcattattaacaccataaac
gcagcactgaaggttcctggaaaacagcatgctttcataggtgttctggacatttatggc
tttgaaacgtttgacatcaacagctttgagcagttttgcatcaactatgcaaatgaaaag
cttcaacagcagtttaacttgcatgtgttcaagctggagcaggaagagtacatgaaggag
gacatcccatggacgctgatcgatttctatgacaaccagcctgtcattgacctgatcgag
gccaagttgggcatcctcgacctgctggatgaagaatgtttatttcctcagggcactgat
cagagctggctgcagaagctgtacaactacctcgaagccaatcctctgtttgagaagccc
aggctgtcaaacgaggcatttgtgatccaacactttgcagacaaggttgagtatcagtgt
ggaggttttcttgagaagaacagagacgccctctttgaagaactgcttgacgttatgaga
gacagtaagtttcgttttctggcgaacgttttccaagaggacgacgacggatctgtgaac
agtaaaggcgtcaaagtgagagctgccaggcctggagtgaaaccagccaacaaacagctg
aggacctcggtgggagataagtttcgcagctccctctctctcctgatggaaacgctcaac
gccaccacgcctcactacgtgcgctgcattaagcctaatgacgaaaagctcccattcgaa
tatgactccaggagggttgtgcagcagctgcgagcctgtggcgtccttgaaactatccgt
atcagtgcacagagctacccatcgaggtggacatacattgagttttacagccgctacagc
atcttaatgtcccctcaggaggcgattgtcaatgataagaaacaagcttgcaagaatgtg
ctacctcggttgattcaggattccaatcagtacaagttcggccggaccaagatcttcttc
cgagctggccaggtggcttatctggagaagcggcgcctcgaccggctccgtggagcctgc
gtaaccatccagaagcacgtccgcggctggagccagaggagggcgtaccttcgcctgagg
ggcgcggccgtcgtcctccagcagtacatccgtggaaagaggacgatccgcaaaacggtg
agcgccgcgacgctgaagcggggctgggcagcagtcgtgatccagagatactggagaggc
taccgtatgaggcagatctaccaggtggtccgcttggcctcggtcaccatccaggccttc
acacgaggctggatagcccgcaagcgattcaggaagatgatggaggagcacaaagtactg
gttctccagaaatacgccagagcgtggctggcacggcgccgctttcagaccatgcggcgg
ctggtgctcaatgttcagctctcgtacagggtgcagcagctccgaaagaagattgaagat
cagaacaaagagaactgcgggttggtggagagactgaccagcctggccagcacccattct
caaactgtggacagacttcaaggcctggaggtgcagatggaaaaactaagcagccagaag
gcggcggtggagtcaagagagaagaaagtgaaggaagatgctgcttcggccattgcacag
cttcagagagcgataaatgcgctaagccttgaaaaagaaaaagtagagaaacagtttgaa
gattccaccaaagaaaccaaagaaaactttgatcaaataaaaagaagtctgcaagacgag
aaagagaatgaaacaaggctgagaaaaatcgctgagaacaacattgagctccagaggcag
gaccacgagaaggaggtggagactctcaaggacgagattaagaggctgaaggaggagagg
gtcggacttcagaggcagatggaggaaggggggcaggtgaactctgacctgcaggaacag
gtcctccagctcagcaagcacgtcaaggccattcccgagctccgcaaagacctcaacagc
ctgcaaaatcagaaaaactccatggaccgaaagatgaaggagcagtctgaacaagcaaca
gctaagttaaaagatgttaccagacaacttcttggaggcgttgttgaagagcaggttctc
ttagggcttatttcggatgattctgagaagatttatgaagttgaagatttgcaggcagct
tttgaaggcctgcagaaagccaccagaatactggaacatcaccggaaggagcagaaagaa
agctatgaaacccaggtggagggcttgacgtacaaagtggaccatctgcaaaacgagaac
agccggctgcaagacctgtttcaggagaagagtaatgtgaatgagaaaattcgccaggag
gtgtccaggctcagcagtgagaacgccattataccggagctgaagctgcaggtgtcagaa
ctgaatagacaaaagcaagaactggaggctcaagtggaagagaagaccagagaaatagct
gaaaaaaatgaggagatcagcaacactcttcaaaaaaagattatggaagagagctcgaaa
cgcaggcactttgagaacagagctgcggagctggaggagctgaagagggagcttcaaggc
caagtagaggagctcgaggaggagaacgagcacttgaagcgacagcagatgatggagagc
gaggcccggagcaagctgaggcaggagacctcgcggttggccgccgagaacatggactgc
gaagagcagctcgaccagaaagaccgattaataaagaagctccagaaccaaataaagagc
ctggaatcgtcacagagagccaagcaaacgtattcgcccgcggttcccaaggactacctg
ggcatgttggaatacaagcgagaggacgaggcccggctcattcagaacatcatcctggac
ctgaagcccaagggggtggtggtgagcatgatccccgtcctgcctgcctacatcctcttc
atgtgtgtgcgccacgcggactacctgaacgacgacgccaagctcaagtctctgatgaac
gcaatcatcaacgggatcaaaaaggtcatcgtgagttaccacaaggacttcgagctgctg
tccttctggctctccaacatgtaccagctgctcaactgtctgaagcagtacagcggagag
gaggagttcatgaaacaaaacacccctcgccagaagaagaactgcttgcagaattttgac
ttgtccgagcacaggcagatcctcagtgatctggccattcacatctaccatcagttcatc
tcaatcatggaaaaggccctcgctccttctatcgtacctggtatgttggaacatgagagc
ttacagggcatttccagcatgaagccgacagggttcaggaaacgctccaacagcctctac
gaggactcggagacctccaccatctccactatcattcagcagctcggctccttccactcc
actatgacccagcatggcatggagcagggcctcatcaaacaggctgtcaaacagctcttc
ttcctcgtgggcgccaccgccctcaaccacatcatgctccgcaaagacatgtgctcctgc
aggaaggggatgcaaatcagatgtaacatcagttacctggaggagtggctcaaggagaag
gagcttcagaactctaatgctatagacactctgaggccgctgagtcaggccgcgtggctg
ctacaggtcaacaagtccaccgacgacgacgccaaggagatcgctgaaaaatgcactgag
ctcagcccagtccagatcgtcaagattttaaattcctacacgcccattgatgattttgag
aaacgggtgtcgtcctcatttgtccgcaaagttcagtcctcgctgcaagatcgagaagga
tccacgcaactgatgctggacacagattatcgtttccaggtcacgtttcccttttgtccg
tcctcacaagctctggagctgctgcaggtgccgagcagccttcacctgggttttctaacc
aggatctga
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integrated database retrieval system
