Betta splendens (Siamese fighting fish): 114858184
Help
Entry
114858184 CDS
T08231
Symbol
rfc1
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl03030
DNA replication
bspl03410
Base excision repair
bspl03420
Nucleotide excision repair
bspl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
114858184 (rfc1)
03410 Base excision repair
114858184 (rfc1)
03420 Nucleotide excision repair
114858184 (rfc1)
03430 Mismatch repair
114858184 (rfc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bspl03032
]
114858184 (rfc1)
03400 DNA repair and recombination proteins [BR:
bspl03400
]
114858184 (rfc1)
DNA replication proteins [BR:
bspl03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
114858184 (rfc1)
DNA repair and recombination proteins [BR:
bspl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
114858184 (rfc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
AAA_22
AAA_5
Rad17
AAA_30
AAA_17
RuvB_N
AAA_14
AAA_18
BRCT_2
AAA_33
AAA_16
RNA_helicase
AAA_7
nSTAND3
NTPase_1
AAA_19
Motif
Other DBs
NCBI-GeneID:
114858184
NCBI-ProteinID:
XP_029010891
UniProt:
A0A6P7MVB9
LinkDB
All DBs
Position
1:complement(10562291..10569732)
Genome browser
AA seq
1159 aa
AA seq
DB search
MDIRRFFAPTAAKSVVQKPAPNGNLKADERRRNPLSSDEDLKKKDATKTKGSKKVEKRKD
GEKKRKKHAVIESDSEEEPVGKVKKSSKEKPKVTNSKKASVQHVSETDSDSDNFLSFEKA
SKTKQNDSSKSDTDSSRGKELLKSPKPPSSQGKAAMKQPAVPVTPKSVPPPQPKQTPTSV
FDYFRDGTIQRSDKKLVASTKRKAPTQDTGDLLSDEEIARQLQMDEDMEFEKQVHEDEEF
ARTLAMLDDEPQAKKARKGSDEKQALTAFSEKSHTDSAAGSTSSPFKSSRIKSEDVISPS
PKKNPAPVKPSSKLALLKKRDERDEGPKSKISASPRKVQISPKKEPLTSSVSDKMSTHSA
TKPSPKKPLSTTTSPEDAEKKKNHGSAFRNYLNRDGPRALGSKEIPQGAENCLEGCVFVL
TGVMESMERDDAKSLIERYGGKVTGNISKKTTYLVQGRDSGVSKLEKAESLGTKILDEDG
LLELIRTQPGKKSKYEIAAEAESKASKTRTPLSQKRTPKAQKISPSKGNSRSPHTPSPSK
TELAQGYGGKSKDSGTPPGRRSGHMARRDLGLASSAPSPSDPSTAGDEGSLLWVDKYRPR
SLKTLIGQQGEQSCANKLLHWLRNWYKNHSGGASKAPAARFGKFGGKDDGSGFKAALLSG
PPGVGKTTTAALVCEELGFSYVEMNASCTRSKNNLKEVVAESLNNTSIESFYKGTSQTVS
NKHVLIMDEVDGMAGNEDRGGIQEMIGLIKSSKIPIICMCNDRNHQKIRSLANYCFDLRF
QRPRVEQIKGAMMSIAFKEGIKIPPPALNEIILASNQDVRQVIHNLSMWSAKDKVMTYDQ
CKSDAASARKDMKLGPFDVCRKVFALGEETAHMSLIDKSDLFFHDYSLAPLFVQENYLHV
RPAVAGGDLKSHLVLLSKTADSICDGDLVDRRIRSGQNWSLLPTQAIYASVLPGELMRGY
MSQFPTFPSWLGKYSSTNKHSRIVQELASHMSLKTLSSRQAVNLDYLPYMRQALLSPLQT
LGAEGAGQAVQLLDDYQLVKEDVDSIMEISTWGGQPDPYSKLDSKVKAAFTRAYNREVHL
TPYSLQTVKKGRRGGGGESELGEDEVNQAVQESEDEGENLKADAMIKQKKAKATKETKKE
KEDSGKGKGKGKGKGKAKK
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atggacatacggcggttctttgcaccgacagcagcaaagtctgtggtgcaaaaaccagcc
ccgaatggaaacttaaaagcggacgagaggaggaggaatccgctgtcttcagacgaggac
ctgaagaagaaagatgcgaccaagaccaaaggctcgaaaaaagtagaaaaacgcaaggat
ggtgagaagaaacgaaagaagcatgcagtcatagagtcagactctgaggaggagccagtg
gggaaggtaaagaagtcctctaaagagaaaccgaaggtcaccaactcaaaaaaagcctcg
gtgcagcatgtctctgaaacagactcggacagcgacaactttctgtcctttgagaaagcc
tccaaaaccaaacagaatgactcatccaagtccgatacggacagttctcgggggaaggaa
ttgttgaagtctcccaagccgccctcctctcagggaaaggctgcgatgaagcagcctgct
gtgccggtcacgcctaagtctgtcccaccccctcagcccaaacaaacccccacctcagtt
tttgactacttcagggatgggactattcagcgctctgacaagaagctggtagccagcacc
aaacgaaaggcaccaactcaggacacgggtgatctgctaagtgatgaggaaattgccagg
cagctgcagatggatgaggacatggagtttgaaaagcaggttcatgaggacgaggagttt
gccaggacattggccatgctggacgatgaaccccaggctaagaaggctcgtaaaggttct
gatgaaaaacaagcccttactgcattttccgaaaagagccacacagactctgctgctggc
agcacaagcagtccgtttaaaagcagccgaatcaagtcagaggatgtgatcagtccgtct
cctaagaagaatcctgcccctgtcaaacctagctccaaactggctctgctgaagaagagg
gatgagagagatgaaggcccgaagagcaaaatatcagcgtcacccagaaaagtgcaaatc
tctcccaaaaaggagcccctcacctcatcagtgtcagacaagatgtccacacacagtgca
actaaaccttctcccaaaaagcctttgagcacgaccacgagtcctgaagatgccgagaag
aagaagaaccacggttcagctttcaggaactacctcaacagagatggaccacgagctctg
ggctccaaggaaatcccacaaggagcggagaactgtctggagggctgcgtgtttgtactg
acaggagtcatggagtcgatggagagagatgatgcgaaatctctcatcgagcgctatgga
ggcaaggtgacgggcaacatcagcaaaaagaccacctacctggtacagggcagagacagc
ggcgtctccaaactggagaaggcagagagtctgggtaccaagatcttggatgaagatggt
ctgttggagctgatcagaacccaaccaggaaagaagtctaagtatgagattgctgcagag
gctgagtccaaagcctcaaagaccaggacgcctttgagccaaaagaggacccccaaagcc
cagaagatctctccctccaagggcaattcgaggtcccctcacactccaagcccatcaaaa
accgaactggcacaaggttacggcgggaagtccaaggacagcggcacgcctcctgggaga
cgctcaggtcacatggctcggcgagatctaggtcttgcttcctctgccccttcaccttca
gacccatcaacggccggagatgaaggcagcctgctgtgggtggacaagtaccgcccgcgc
tccctgaagactctgattgggcagcagggggagcagagctgtgccaacaagctgctgcac
tggctgaggaactggtacaaaaaccacagtggaggtgcttccaaggccccagcagcaagg
tttggtaagtttggaggcaaagacgacggatcagggtttaaagcggctctgctctctggg
ccaccgggggtggggaagaccaccacagctgccctggtctgtgaggagttgggcttcagc
tatgtggagatgaacgccagctgcacccgcagcaaaaacaacctgaaggaagttgtggca
gagtcacttaacaacaccagcattgagagcttctacaaaggcacttctcagactgtgagc
aataaacatgtcctgatcatggatgaggttgacggtatggctggcaacgaggaccgtgga
ggaattcaggagatgattggcctgatcaaaagttcaaagattcccatcatctgcatgtgc
aacgaccgcaaccaccaaaagataaggtcactggccaactactgcttcgatctgcgcttc
cagaggccgcgagtagaacagatcaagggagccatgatgtccattgctttcaaagaggga
ataaagatcccacccccagctcttaatgagattattctggcctccaatcaggatgtccga
caggtgatccacaacctgagcatgtggtctgccaaagacaaggtgatgacgtatgaccag
tgcaagtctgacgcagccagcgcccgtaaggacatgaagctagggccgtttgacgtttgc
cgaaaggtgtttgccctgggcgaggagacggcccacatgagcctcattgacaagtccgac
ctcttcttccacgactactcgctagcgccgctgtttgtccaagagaactaccttcatgtt
cgtccagcagttgctggtggagatcttaagtcccacctggtgttgctaagcaagacagcg
gactccatctgtgatggggacctggtggacagacggatccgctcgggccagaattggtca
ctgctgcccacccaggccatctatgccagtgtgttaccaggtgagctcatgagaggatac
atgtctcagttcccaacattcccgagttggctcggcaagtactcgtctaccaataaacat
tcccgcatcgtccaggagctggcctcacacatgagtttaaagacgttgagcagcagacag
gcagtcaacctggactacctgccctacatgcggcaagcgctactgagtccactccagacg
cttggagcagagggagctgggcaagctgtgcagctgctggacgattaccagcttgtcaag
gaggatgtggacagcatcatggagatcagcacgtggggtggacagccggacccctactct
aaactggactccaaggtcaaggcagcttttacgcgggcgtataacagagaagttcacctg
actccatactcactgcaaactgtaaagaagggacgccgtgggggtgggggagagtcagag
ctgggggaggatgaggtgaaccaagctgttcaagagtccgaggacgagggagagaacctg
aaagcagacgctatgatcaaacagaaaaaggccaaggccacaaaggagacaaagaaggag
aaggaagattctgggaaggggaaaggcaaaggcaaggggaaaggcaaagctaagaaatga
DBGET
integrated database retrieval system
