Betta splendens (Siamese fighting fish): 114858443
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Entry
114858443 CDS
T08231
Symbol
clstn1
Name
(RefSeq) calsyntenin-1 isoform X1
KO
K22659
calsyntenin 1
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
bspl04515
]
114858443 (clstn1)
Cell adhesion molecules [BR:
bspl04515
]
Cadherins
Cadherin related
114858443 (clstn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
CDC45
FAM176
Laminin_G_2
Toxin_R_bind_N
V_ATPase_I
EphA2_TM
Cadherin_C_2
PFF1_TM
TMEM132_C
Motif
Other DBs
NCBI-GeneID:
114858443
NCBI-ProteinID:
XP_029011536
UniProt:
A0A6P7MX22
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All DBs
Position
7:6176381..6200053
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AA seq
981 aa
AA seq
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MRFRGNTQFASAVGLLFGLLCAAEAAKVNKHKPWIETTYHGIVTENDDKVLLDPPLIALD
KDAPLRYAESFEVTLTEEGEICGFRIHGQNVPFEAVVLDKSTGEGVIRAKDKLDCELQKE
HTFTIQAYDCGEGPDGANMKKSHKATVHIQVNDINEYSPVFKEKSYKATVIEGKKYDSIL
KVEAVDADCSFQFSQICSYEIVTPDVPFTIDKDGFIKNTEKLSYGKEHMYKLTVTAYDCG
KNRASEDVLVKISVKPTCKPSWQGFNKRIEYEPGTGSLALFPSIHLETCDEPITSIRANV
ELETNHIGKGCDRDTYSEKSLHKLCGASSGTVELLPAPSSSANWTVGLPTDNGHDSDQVF
EFNGTQAIKVPDGMVSTSLKDPFTISVWMRHGPGAHEKETILCNSDKTEMNRHHYSLYVH
NCRLILLLRQDPSEAENYKPAEFHWKLDQACDKEWHHYVLNVEFPAVSLFVDGTAFEPFL
VTEDYPLHATKIESQLTVGACWQENSGHDNDTETVSEPTSGGSGRMAQFFRGNLAGLMIR
SGKLENKKVIDCLYTCKEGLDVQLPEEVASAVKVEFNPNQSSLTVEGDDVDAFDKVMQHI
SYLNSRQFPTPGIRHLRISTTVKCFNEESCVAVPDAEGYVMVLQPEEPKISLSGIDHFAR
SATEFESQEGVTLFPELRIVSTITREVEADAESEAAEGADDDPTVQETVVSEEIMHNLDT
CEVTVVGDELDGEHEGLEVDMSQLQQRGLEMSSSNLGLVINGVNTMANYEQVLHLIRYKN
WHTEALFDRKFKLVCSELNGRYISNDFKVEVNVIHTANPVEHANNAMVQANFINPVHHAS
VDLSGHNLVNAHQASVVPSAATIVIVVCVSFLVFMIILGVFRIRAAHQRTMRDQESGKEN
EMDWDDSALTITVNPMETYEDQHSSEEEEEEEEESEDGEEEDDITSAESESSEDEEGGEP
EDQQGASRQQQLEWDDSTLTY
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgcggttccgagggaatacgcaatttgcatccgctgtcggactgctcttcggactatta
tgtgcggcggaggcggctaaagtcaataagcacaaaccgtggatcgagacgacgtaccac
gggatcgtgacggagaacgacgacaaggtgctgctggacccgccgctgatcgctctggac
aaggacgcgcccctacgctacgcagagagttttgaggtgaccctcactgaagaaggtgag
atttgcggcttcaggatccatggacagaacgtccccttcgaggcagtggttctggacaag
tccactggcgagggggtcattcgggccaaggacaagctggactgtgagcttcagaaggag
cacaccttcaccatccaggcctatgactgtggagagggtcccgatggcgctaacatgaag
aaatcccacaaggccactgtccacatccaggtgaacgacatcaacgagtattcacccgtg
ttcaaggagaagtcctacaaagccactgtcatcgaggggaagaagtacgacagcatcctg
aaggtggaggccgtggacgccgactgctccttccagttcagccaaatctgcagctacgag
atcgtcacccctgacgtgcccttcaccatcgacaaagacggcttcatcaagaacacagag
aagctgagctacggcaaggaacacatgtacaagctgaccgtgacggcgtacgactgcggg
aagaaccgcgcctccgaagacgtgctggtcaagatcagcgtcaaacccacctgcaaaccc
agctggcaaggctttaataagaggattgaatatgagcccggcaccggcagcctggccctc
ttccccagcatccacctggagacctgcgacgagccaatcacctccatccgtgcgaacgtt
gaactggagaccaaccacattgggaagggctgtgaccgtgacacctactctgagaagtcg
ctgcacaagctgtgcggagccagctctggcacagtggagctgctccctgcacccagcagc
tccgccaactggacagtgggactccccaccgacaacgggcacgacagcgaccaggtcttt
gagttcaatggcacccaggccatcaaggtgcctgacggcatggtgagcaccagcctgaag
gatcccttcaccatctctgtgtggatgagacacggcccgggggcccacgagaaggagacc
atcctctgcaactccgacaaaaccgagatgaacagacaccactactcgctctacgtccac
aactgtcggctcatcctgctgctgcgccaggatccttcagaggcggagaactacaaaccg
gcagagtttcactggaagctcgaccaggcgtgtgacaaagagtggcatcactacgtgctg
aacgtggagttccccgccgtgtccctgtttgtggacggcacggccttcgagcccttcctg
gtcacggaggactaccccctgcacgccaccaagattgaatcccagctcactgttggtgcc
tgctggcaagaaaactcaggacatgacaatgacactgagacagtctctgagcccacctca
ggcggaagcggtcgaatggcccagtttttccgggggaacctcgcggggctgatgattcgc
tccggcaagctggagaataagaaggtgatcgactgcttgtacacctgcaaggagggcctg
gatgtgcagctgcctgaggaggtggcttcagcagtcaaggtggagttcaaccccaaccag
tcctccctgacagtcgagggtgacgacgttgatgcctttgacaaggtcatgcagcacatc
tcctacttgaactcccgccagttccccacccctggcatcaggcacctgcgcatctccacc
accgtcaaatgcttcaacgaggagtcctgcgtggcggtgccggatgctgaaggctacgtg
atggtgctgcagcccgaggagcccaagatcagcttgagcggcatcgaccacttcgcccgc
agcgccaccgagttcgagagccaggaaggcgtgacgctgttccccgagctgcgaatcgtg
agcaccatcacccgcgaagtggaggccgacgcggagtctgaggctgcggagggcgccgac
gacgatccgacggtccaagagacagtggtgtcagaggagatcatgcacaacctggacacg
tgtgaagtgacagtggtgggggacgagctggacggggagcacgagggcctggaggtggac
atgtcccagctgcagcagcgcggcctggagatgagctcctccaacctgggcctcgtcatc
aacggtgtgaacaccatggccaactatgagcaggtcctgcacctcatccgctacaagaac
tggcacacggaggctctgttcgacaggaagttcaagctggtctgctctgagctcaacggc
cgctacatcagcaacgacttcaaggtcgaggtgaatgtgatccacacagccaatcccgtg
gagcacgcgaacaacgccatggtgcaggcgaacttcatcaaccccgttcaccacgcgtct
gtggacctgtcggggcacaacctggtcaacgctcaccaggcctcagtggttcccagcgcc
gccactattgtcattgtggtatgcgtgagcttcctggtgtttatgataatcctgggcgtg
ttccgcatccgagccgcacaccagcgcaccatgagggaccaggagagcggcaaggagaac
gagatggactgggacgactcggccctcaccatcaccgtcaaccccatggagacgtacgag
gaccagcacagcagcgaggaggaggaggaggaggaggaggagagcgaggacggcgaggag
gaagacgacatcacgagcgctgagtcagagagcagcgaagacgaggagggcggggagccg
gaggaccagcagggggccagcagacagcagcagctggagtgggacgactccaccctcacc
tactaa
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