Betta splendens (Siamese fighting fish): 114858611
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Entry
114858611 CDS
T08231
Symbol
hdac6
Name
(RefSeq) histone deacetylase 6 isoform X2
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bspl01009
]
114858611 (hdac6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bspl03019
]
114858611 (hdac6)
04131 Membrane trafficking [BR:
bspl04131
]
114858611 (hdac6)
03036 Chromosome and associated proteins [BR:
bspl03036
]
114858611 (hdac6)
Enzymes [BR:
bspl01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
114858611 (hdac6)
Protein phosphatases and associated proteins [BR:
bspl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
114858611 (hdac6)
Messenger RNA biogenesis [BR:
bspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
114858611 (hdac6)
Membrane trafficking [BR:
bspl04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
114858611 (hdac6)
Chromosome and associated proteins [BR:
bspl03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
114858611 (hdac6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
CBM_4_9
Motif
Other DBs
NCBI-GeneID:
114858611
NCBI-ProteinID:
XP_029011882
UniProt:
A0A6P7MY25
LinkDB
All DBs
Position
7:237423..259914
Genome browser
AA seq
1091 aa
AA seq
DB search
MNSGSDPPVSGLKSVKRSPRLSAQGNRSEGNPAVSGGNIVQVKRRGRMERSREDREEELN
VRLQALDLSSLSLICGTGLVYSEIFTHHQNLWDPSHPENPDRVKSIMKELEKQELLSHCI
RVEPREATEDELLLAHAKSYVQLMRLTEKMSVGELQTLSEKYDSVYLHPESFQVSAFAVG
SVLQLVDQVMTFKLRNGFAVIRPPGHHAQSNKSNGYSVFNNVAIAARYAQTRHLISRVLI
VDWDVHHGQGIQYMFQEDPSVLYFSVHRYEFASFWPHLTESDSQSIGSGRAEGRNINLPW
NKTRMTDADYMAAFQQLLLPVAYEFQPQLVLVCAGFDAAVGDPKGEMCVSPQCFHVLTHM
LMALAEGRLVLALEGGYNLQSTAEGAAACVKALLGRACPPLAPPTAPSNSALQSISRSIS
AVYPHWTFLQVLEGVQLAENSVLRDTSNEEVLKQAGPTPSVATNTGLVYDERMMEHLNLW
DRHHPEQPQRISKIFSRLQQLGLVDRCQRIPARLASHEELSLCHSMQHIEQMKATTDMKP
RDLHKLGQEFNSIYINNQSFQSAQLAAGGCFNAVERILDGQVSNGIAVVRPPGHHAERDS
PCGFCFFNTVALTARYAQKISNDAPLRVLILDWDVHHGNGTQHIFEDDNSVLYISLHRYD
NGMFFPSSEDAAPNCVGVAKGAGFNVNVAWSGGRMGDSDYLAAFHHVVMPIATEFNPGLV
LVSAGFDAARGDPLGGYHVTPEGYAHLTHLLMSLAGGRILLILEGGYNLSSISDAMMMCT
SMLLGEPPPSLVTPASPPHHNAVATINEVIRYHAPYWRSLRIHIPESVQTSLPSPKHHGK
RSSKGRSRKLETPLQPPTEPENTTTESSLAHLSQGLSSLDISETSANQMSAASTLVGGGK
VHLSFEVTYKSEAKAESNVAVPIQSQSGDGTPSQTVAMETSDVAAAAGGVWAEFEGACGW
SKPETHLDLMCREKTDGTSLFLIEPLSWCPHLDAVKPVPPSGINTFQLCQDCGSDSENWI
CLTCYQVYCGRYVNEHMVTHSVVSEHPLVLSFSDLSVWCYLCEVYIHNQVVYEAKNAAHC
AKFGEEIPPWS
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgaattctggatcagatcctccagtgtctggactcaagtcagtgaagagatctcctcgc
ttgtccgctcagggcaacaggagtgaaggaaatccagccgtgagcggaggaaacattgtg
caggtgaagaggagaggaagaatggagaggagcagagaggacagagaggaggagctgaat
gtcagactgcaggcactggatctgtcaagcctatccttaatctgcggaaccggtttggtt
tactcggagatcttcactcatcaccagaacctgtgggatcccagtcacccagagaatcca
gacagagtgaaatccatcatgaaggagctggagaaacaagagctgctatctcactgcatc
agggtggagcccagagaagctactgaagacgagctgctactagctcacgcaaaatcttat
gtgcagctgatgaggttgactgagaagatgtcagtgggggaacttcaaactctgtctgag
aaatacgactctgtttatcttcatcctgagtcctttcaggtgtctgcttttgctgtgggg
tcagtcctccagctggtcgatcaggtgatgacctttaaactcaggaatggattcgctgtc
attagacctccaggtcatcatgctcagagtaacaagtccaatggttactctgtcttcaac
aatgtggcaatcgcagcgcgatatgctcagaccagacacttgatcagcagagtgctgatc
gtggactgggatgttcatcatggtcagggaattcagtacatgttccaggaagaccctagc
gttctgtacttcagcgtccataggtacgagtttgcctccttctggccccatctcacagag
tcggacagtcagtccattggcagtggacgagctgaaggaaggaacatcaacttgccctgg
aacaagaccaggatgacagacgctgattacatggctgcctttcaacagctactgctgcct
gtggcctacgagtttcagcctcagttggttctggtatgtgccggttttgatgctgctgtc
ggtgatccgaagggggagatgtgtgtgagccctcagtgcttccatgtcctcacccacatg
ctgatggctttggctgaaggtcgattggttctcgctcttgagggaggttacaacctgcag
tcgacagcagagggcgccgcagcctgtgtcaaagctctgctggggagagcatgtcctcct
ctggccccgcccaccgctccgtctaacagtgctctgcagtcaatctctcggtccatctct
gctgtgtatccacactggacctttctacaagtgctggaaggcgtccagttggctgagaac
agtgtcctcagggacacatccaatgaggaggtcctcaagcaggctggtcccactccctct
gtggccaccaacacaggtctggtttatgatgagaggatgatggagcacctgaacttgtgg
gacagacatcaccccgagcagccacagaggatctccaaaatcttctccagacttcagcaa
ctgggtttggttgatcgttgtcagcggataccagctcgcttagcatcacacgaggagcta
tccctctgccacagcatgcagcacattgagcagatgaaagctacaacagacatgaagcca
agagatctgcataaactgggacaagagttcaactccatctacatcaacaaccagagcttc
cagtcggctcagttagctgcaggaggctgcttcaacgctgtggagaggatcctggatgga
caggtgagtaacggcatagccgtcgtccgtccccctggtcaccacgcggagagagactct
ccctgtggtttttgttttttcaacactgtagcgctcaccgcccgctacgcacaaaaaatc
tccaatgatgcaccactgagagttctcatcctggattgggacgttcatcatggcaatggg
acacaacacatatttgaggatgataacagtgtcctgtacatctccctccatcgctatgac
aatggaatgttcttcccctcgtcagaggatgctgcccccaattgcgtgggtgttgccaag
ggggcaggatttaatgtcaatgtggcctggagtggaggacgcatgggtgattccgactat
cttgctgcatttcaccacgttgtcatgcctatcgctactgagtttaaccctggtctggtt
ctggtgtcagctgggtttgatgcagctcggggggaccctctgggtgggtatcatgtaacc
ccagaaggttacgcccacctcacacacctgctgatgtcactggccgggggtcgaatcctg
ctcatcctggagggaggttataacctgtcatctatttctgacgccatgatgatgtgcacc
agcatgttactaggagagcctcctccatccttggtgacgcccgcatccccgcctcaccat
aatgctgtggcaacgatcaatgaggtcatccgataccacgccccttactggaggtcactg
aggatacacatcccagagtctgtgcagacatccctgccctccccaaagcatcatggaaaa
cgcagttctaaaggaagaagcaggaagttagagacgcctctgcagcctcctacagaacca
gagaacaccacgacggagtccagcctggcccacctcagtcaaggattgtccagtttggac
atcagtgaaacctcagcaaatcagatgtctgctgcatccactctggtgggcgggggaaag
gttcatctcagttttgaagttacgtataaaagtgaagcgaaggccgaatcaaatgtagct
gtacccattcagagccaatcaggagacggcacgccatctcagactgttgccatggaaaca
tcagatgtggctgctgctgctggtggagtctgggcagaatttgaaggagcgtgcggttgg
tccaagcctgagacacatctggacctgatgtgtagagaaaagacagatggaacctctttg
ttcttgattgagcctctatcgtggtgtcctcacctggatgctgttaagcctgtccctccc
tcaggtatcaacaccttccagctatgtcaggactgtggctcagattctgagaactggatc
tgccttacttgctaccaggtgtactgtggtcgttatgttaatgagcacatggtgactcac
agcgttgtgtccgaacatcctctggtgctgagcttctctgatttgtctgtgtggtgttac
ctgtgtgaggtctacatccataaccaggttgtgtatgaagctaaaaatgctgctcactgt
gccaagtttggagaggagatccctccatggagctga
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