Betta splendens (Siamese fighting fish): 114858775
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Entry
114858775 CDS
T08231
Symbol
nphp4
Name
(RefSeq) nephrocystin-4 isoform X3
KO
K16478
nephrocystin-4
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
bspl03037
]
114858775 (nphp4)
Cilium and associated proteins [BR:
bspl03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
114858775 (nphp4)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DUF2155
PRTP
EFP_N
Motif
Other DBs
NCBI-GeneID:
114858775
NCBI-ProteinID:
XP_029012170
UniProt:
A0A6P7N1H9
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Position
7:complement(12242319..12352166)
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AA seq
1440 aa
AA seq
DB search
MSSDTEQWEKVFERNRFVLPPSQTVRRAVDRHLTQSSGFQLSLGRLAAPHLLQETSEGQE
DLDYQLRVTFFDHKQQHFFGRTWKTTPQCMKHNKISFNKVVYFHTSLKLPGTMLVLELVS
LSPRPDGSQQAVGQGLTVLDLFANRAEAQDADGNRRLNLYHGSPRGFLHPLVKDMVGCVG
LLKAIDGAHLDCVIRSHPALASAMHLLPQNVVVSGDENIPGLVASPTGDALLRPHTLRML
PFTLNRLTISLQPSLEQFESQLLQLINADCRNTKQPQPDGTAQTFVIQERRLHVGVHNGW
CFLDNPQVVVLEPQASRVRARADSTSRRGSPLRDSTVTSSLPHVLCLRSSLEVKLVNHQA
LAIVFQLEYVFSTPIGRETTLSATFTSRAAFLQCLRWGIWCPFQEPADWKGKEIQLDLRG
GAQSNPYGVMVYGAEASARTRSPALLSPSGTAQVSDVKDTMKFRLLSSLEGTASSPKASL
RSKQTPRRSPPSSPHRGTPASPPESPPEPGLSLSQLAATSRYPTISHSSSALPWQQSFPS
LLHPYPLASAHQLSHVACSAVSSIAHLEVDFQREGEASPSAPDEGDQLRELPFAPVHAPV
ITLGVNVPSSGPVSSRSSLARLHSAGFPDIQDCSGQVAEVLDPTEPVPFDPLHEEADALR
GNLVVFQFLAFTRMPVAGVGHDWPDNIYFTFQFYRFPPVTSQRLKLLTSDKVHHKTSDPP
SCILASINNDGSVNSGSPGLQVQFRVDDSFLRPGEKRWFLRYLALHTMHISVWDSSSLLL
IGSTAIELKYLLRQGKSAVQTLHEVEVLTTDYVGDDALLTSAGLGHRSPSGSMTVHTVVR
GRLHIRTGNIGCPAEPRGGRTADATSSPTHIIVPSKATSAFKGGSLSSRNLLQHNARNRS
QPDRLESDWDPVPTGRDPNGPDGELRHKLRRMAAVRQREGEEDVRAAKVALRSNDSLEPT
RGAELKRELHPTEARERSKAERIASMLSLAITTQHLLYASLGSAEYVEFALRNPFNVPQT
VTIHSDDAELSVITDTEEWRYFKALTKTHTPLEENMFHLEDGAAGPRVYLRPKESVYIPL
KYQSFLCDHTMAPQGPSFLPAGKGSQVAKKKPSNLVAGKTIKVTFKAEDGKPMAVCQLNV
EPTPHVVDQTFRLYHPELTFLKKAIRLPPWHNPAVEEQDVGTRVFVRCSDPNIICQTRKL
VPGEPQDVFLKVPGSPSPNIKMFFVMVFTDKWMAAPSQVWQIYVHFLERVDVSCVTGQRT
CQSLVLKGKQAVRKVQCFSSKPKEIEVDPKGVFVLPPAAVQELQLKVQPWRVGSRFVYVN
AVDVEQRRLVAAWLLCLNVHQPVLSKAFEVCVPAGSKRGSSKKITYTNPYTNSRTFLLRS
DHPDLLQFKEDEFQIDGGESYTIGLRFAPSQSPGSVEILVYVNNVEEKTEETFCIRLSYS
NT seq
4323 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcgacacggagcagtgggagaaggtgtttgagagaaaccggttcgttctcccg
ccgagccagacggtccgccgggcggtggaccgccacctcacgcagtccagcgggttccag
ctcagcctcggccggctcgcagctccccacctcctccaggagacgtcagagggacaggaa
gacctggactaccagcttcgagtgaccttctttgatcacaaacaacagcacttctttggg
agaacatggaagaccactccgcagtgtatgaaacacaacaaaatctccttcaataaggtc
gtgtactttcatacgtctctgaagttgcccggcacgatgttggtcctggagctcgtttct
ctgtcacccaggccagacggatcccagcaggccgtggggcaaggcctcactgtcctggac
ctttttgccaacagagcagaggctcaagatgcagatgggaacagaaggctgaacctctac
catggatcacctagaggcttccttcaccccctggtaaaggacatggttggctgcgtcggt
ctcctgaaggccattgacggcgcacatttggactgtgtgataagaagccatccggctctg
gcctccgccatgcaccttctcccacagaacgtcgtcgtctccggtgatgagaacatcccc
ggcctcgtagcttctccaacaggtgatgctctgctcaggccgcacacgctcaggatgctg
cccttcaccctgaacagactgaccatctccctccagccctccctggagcagttcgaaagc
cagctgctgcagctgatcaatgctgactgccgcaacacaaagcagccgcagccagatgga
acagcgcagacgttcgtcatccaggaaaggaggctccacgtgggcgttcacaacggctgg
tgtttccttgacaacccccaagtggtggtcctggagccgcaggcgtcgagggtccgggcc
cgagcggacagcacctccagacggggcagcccgcttagggacagcaccgtgacgtcatcc
ctccctcacgtgttgtgccttcgcagcagcctggaggtcaagctggtcaatcatcaggcc
ttggccattgtcttccagctggaatacgtcttctctactccaatcggacgggagactacg
ctctctgccactttcacttcgcgagcagccttcctgcagtgccttcgctgggggatttgg
tgccccttccaggagccagctgactggaagggaaaagagatacagcttgatctgcgagga
ggcgcgcagtcaaacccttacggagtcatggtctacggcgccgaggcatctgccagaact
cggagccccgcgctcctctcaccttcaggcaccgcgcaggtctctgacgtaaaagacaca
atgaagtttcggctcttgtcctctctggaaggaacggcatccagtcccaaggcgtcgctg
agatcaaagcagactccgagaagatcacctccatcctccccacaccgtgggacaccagct
tctcctccagaatcacctccagaaccagggctctcactgtctcagctggcagcgacttca
cgctacccgaccatcagccactccagctcggcgttaccgtggcaacagtcgtttccttct
ctgctccatccttacccgttggcatcagcccaccagctgtcacatgtcgcctgttcagct
gtcagcagcatcgcccacctggaggtggactttcagcgtgagggggaagcgtcgccctcg
gcgccagatgagggagaccagctacgggagctgcccttcgctcccgtccacgcccccgtc
atcactctgggggtgaatgtgcccagctccggcccagtcagctccaggagctcgctggcc
cggctccactcggccgggttccctgacatccaggactgcagcgggcaggtggcagaagtc
ctggaccccacggagcccgtgccctttgaccccctgcacgaagaggccgacgctctgcgg
ggaaacctggtggtgttccagttcctggcgtttaccaggatgccagtggcaggtgttggt
cacgactggcctgacaacatctatttcaccttccagttttatcgctttcctccagtcaca
tcacagcggctcaagctactgaccagtgacaaggttcaccataaaactagtgatccacct
tcctgcatcctggcctctatcaacaatgacggcagtgtcaactccggctctccaggtctg
caggtgcagttcagagtggatgacagcttcctgaggccaggagagaagcgctggttcctt
cgctatctggccctgcataccatgcacatcagcgtctgggacagcagctcattgctcctc
ataggctccactgccatcgagctgaagtacttgttgcgacagggcaaatcagcggtgcag
accctccatgaggtggaagtgctgaccacagattacgtgggagacgacgccttgctgacg
agcgcaggtttgggccatcgatcgccctccggctccatgacggtgcacaccgttgtcagg
ggcaggctgcacatacggacgggcaacatagggtgcccagctgaaccccgcggggggagg
acggcagacgcgacctcgtctccgactcacatcatcgtaccttccaaagccaccagtgcc
ttcaaaggaggaagcctgtcctccagaaacctcctccaacacaacgcgaggaaccgctcg
cagccggacagactggagtcggactgggacccggtgccgacgggacgcgacccgaacggg
ccggacggcgagctgaggcacaagctgcggcgcatggcggccgtgcgtcaacgggagggc
gaggaggacgtcagagcggcgaaggtcgcgctgaggtcaaacgattcacttgagccgacc
agaggagcggagctgaagagggaactccacccgaccgaagccagggagcggagcaaggcc
gagcgcatcgccagcatgctgagcttggccatcaccacccagcatctgctctacgccagc
ctgggctcggccgagtacgtggagtttgctcttcggaaccccttcaacgtgcctcagacc
gtcaccatccacagcgacgacgcggagctcagtgtcatcactgacacagaggagtggcgt
tacttcaaagctctaaccaaaactcatactccactggaggagaatatgttccacttagag
gacggtgccgccggtcccagggtttacctcaggcccaaagagagtgtctacatccccctg
aaataccagagcttcctctgcgaccacaccatggcccctcagggaccgagttttctacct
gcaggcaaaggttctcaggtggccaagaagaagccttccaatttggttgctggcaaaact
ataaaggttacattcaaagcagaggatgggaagccgatggccgtctgccagctgaacgtg
gagccgaccccccacgtcgtggaccagacctttcgactttaccaccctgagctcacgttc
ctcaagaaggccatccgcctgccgccctggcacaaccccgcagtggaagagcaagacgtg
gggacccgggtctttgtgcgctgtagtgaccctaacatcatctgccaaacgaggaagctg
gtgccaggggagcctcaggatgtgtttctgaaagtgccagggagtcccagtccaaacata
aaaatgttctttgtgatggttttcactgataagtggatggcagcgccctctcaggtctgg
cagatttacgtgcatttcctggagcgggtggatgtcagctgcgtgactggccagcggacc
tgtcaatcactggtgctgaagggaaagcaggctgtgcgcaaggtccaatgtttctcatcc
aaacccaaggagatcgaggtggacccaaaaggtgtgtttgtgttgcccccggcagccgtg
caggagctccagctcaaagtgcagccgtggcgcgtcggcagccgcttcgtgtacgtgaat
gcggtggatgtggagcagcggcggctggtcgctgcctggctgctgtgcctcaacgtccac
cagcctgtgctgtccaaggcgtttgaagtgtgtgttccagccggtagcaagcgaggcagc
tcaaagaaaatcacctacaccaacccgtacaccaacagccgcacattcctgctccgctcc
gaccatccagacctgctgcagttcaaagaagatgaattccagatcgacgggggggagagc
tacaccatcggactgagatttgctccaagccagagtcccggctcagtggagatcctggtc
tatgtgaacaacgtcgaggagaagacggaggagaccttctgtatcagactcagctactcc
tga
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