Betta splendens (Siamese fighting fish): 114858879
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Entry
114858879 CDS
T08231
Symbol
pcdh18a
Name
(RefSeq) protocadherin-18a isoform X1
KO
K16499
protocadherin delta 2
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
bspl04515
]
114858879 (pcdh18a)
Cell adhesion molecules [BR:
bspl04515
]
Cadherins
Protocadherins
114858879 (pcdh18a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
TMEM154
MpPF26
PAG
Protocadherin
Cadherin_C_2
Syndecan
Herpes_glycop
Motif
Other DBs
NCBI-GeneID:
114858879
NCBI-ProteinID:
XP_029012375
EnsemblRapid:
ENSBSLG00000019043
UniProt:
A0A6P7N2A7
LinkDB
All DBs
Position
1:13830964..13838751
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AA seq
1178 aa
AA seq
DB search
MRPGKMNGLFLRRMWKVLAVLAVATQPVAGKTLKYQIYEEQKVGTVIARMKDDVADVLAK
LPSSVSLRFRAMQRGSSSFLAVRELDGEISIRTKIDREKLCEKNLNCSIQFDVLTLPTEH
LQLFHVEVEVLDINDNAPQFARAVIPIEISESAAVGARIPLDSATDPDVGENSLYTYALE
PNNFFRIDIQARTDGAKYAELVVLRELDREVRSGYELQYTASDRGVPPRTGTTLLKISVT
DSNDNSPVFDKSSYVINLPENSPVGTLLIDLNATDADEGTNAKIVYSFSSHVSPKIMETF
KINPDSGHLTLIRRVDYEAVNSYDIDVQAQDMGPNSMPAHCKILVKVVDVNDNKPDISIN
LMSSQGNGDAAYVSEASPLDTFVALVRVEDLDSGLNGEVECKLHGQGYFKLQKTYENNYM
ILTNVSLDREKRSEFSLTVVAEDKGTPSLSTVKHFTVHVTDENDNPPRFEKGRYEIFKSE
NNPPGAYLTSIMATDPDLDANGQVSYSILENSVHGSSISTYVTIDPSNGAIYALRTFDRE
DVSRISFVVQAKDAGKPPLVSNATVILNILDENDNPPVIVVPQLWNFTADVPASKFTEAG
HLVTVVRATDRDTGVNAELICSVVSGNEEGFFLIDPRTCEIHANASLESFPHEHAELTVL
VRDQGSESLSAKAVLKITLYENMENHVQVMDQGESSLDVSLIIIISLGAICAVLLVIMVV
FAARCNREKKDTRHSYNCRVAESTHQHHPKKPSRQIHKGDITLVPTVNGTLPIRAHHRSP
SATPPLDRAQMGSRQNHHSRQSLNSLVTISSNHIPESFALELAHATPPVEQVSQLLSMLH
QGQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDCDMGRESPVDRLLLG
EGFSDLIHLEMHHRLHPAMRLCTDECRILGHSDQCWMPPLSSPATSADYRNNMYIPGEES
AQQPPIDDDQSSVDSEHRKSFSTFGKEPGSEEAAAGGVAAGAGGDACAAGGGGGSLLTEM
NSVFQRLLPPNMDSYAECSETSPPSASSAAERGSGRNNAVPQDNRRGLLPGGKGPAYPPG
VAAWAANTHYLNPGSGSVASNQPSSTSTSTSTNGQPPHLKWLPAMEEIPENYEEDDFDGV
FHQGHAGGKRGDGRHEPGIDSSELVHEINKLLQDVRQN
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgcgaccgggaaaaatgaacggactttttctgagaagaatgtggaaagttctggctgtt
ttggccgtggcgacgcaacccgtcgcgggcaaaacgctgaaatatcagatctacgaggag
cagaaggttggcaccgtgatcgcccgcatgaaagacgacgtcgcggacgttctggctaaa
cttcccagctcggtgtcgctgcgcttcagggcgatgcaacggggctcctcgtcgttcctc
gcggtgcgggagctggacggggaaatcagcatcaggaccaaaatcgaccgcgagaaactc
tgcgaaaagaatctcaactgctccatccagttcgacgtgctgacgctgcccaccgagcac
ctgcagctgttccacgtcgaggtggaggtgttggacattaacgacaacgcgccccagttc
gcccgtgccgttatccccatcgagatatccgagagcgcggcggtgggagcgcgcattccc
ctggacagcgccacggaccccgacgtcggggaaaactcgctgtacacgtacgccctggag
cccaacaacttcttcaggatcgacattcaggccaggacggacggggcgaaatacgccgag
ctggtggtgctccgggagctggaccgggaggtgcgctccgggtacgaactccaatacacg
gcctctgacaggggcgttcccccgaggacgggcacgaccctcctcaaaatcagtgtcacc
gactcgaatgacaacagtccagtttttgacaagtcgtcatatgtcataaatctgcctgaa
aattcccccgttggcactttgctcattgacttaaacgccactgacgccgacgaaggcact
aacgccaaaatagtctactccttcagcagtcacgtgtcgcccaaaatcatggagacgttc
aaaatcaatcccgacagcggtcacctgaccctcatcaggcgcgtggactacgaggcggtt
aattcttacgacatcgacgtgcaagcgcaggacatgggtcccaactcgatgccagcgcac
tgcaagatcctggtgaaagtggtggacgtgaacgacaacaaaccggacatcagcatcaac
ctcatgtcctctcaggggaacggggacgcggcttacgtgtccgaggcgtcccccctggac
acgttcgtggctcttgtgagggtggaggacttggactcggggctgaatggagaggtggag
tgcaagcttcacggacaaggctatttcaagcttcaaaagacttacgagaacaactacatg
attctgaccaacgtgtctctggaccgagagaagaggtcagagttcagtctgaccgtagtg
gccgaggacaaggggactcccagtctctctactgtcaaacatttcactgtgcatgtaact
gatgaaaacgacaacccgccccgttttgagaagggacgctatgagatctttaaatcagag
aacaaccctcctggagcgtacctgacctccatcatggccaccgaccccgacctggatgcc
aacggccaggtgagctactccatattggaaaactccgttcatgggagttccatctccacc
tacgtcaccatcgacccctccaatggcgccatctacgccctgcgcaccttcgaccgcgag
gacgtgagtcgcatctccttcgtggtccaggccaaagacgccggcaagccgccgctggtg
agcaacgcgacggtcatcctcaacatcctggatgagaacgacaaccctccggtcatcgtg
gtcccgcagctgtggaacttcaccgccgacgtgccggcatccaagttcacggaggccgga
cacttggtgacggtggtgagggccacggatcgggacacgggagtcaacgctgagctcatc
tgctccgtcgtcagcggcaacgaggagggcttcttcctcatcgaccccaggacatgcgag
atccacgccaacgccagtctggagagcttcccccacgagcacgccgagctgacggtgctg
gtccgagatcagggaagcgagagcctcagtgccaaggcggtgctgaagatcaccctctat
gagaacatggagaaccacgtccaggtgatggaccaaggggagtcttctctcgatgtgtcc
ctgatcatcatcatctccctgggggccatctgtgctgtgctcctagtcatcatggtggtg
tttgccgcccgctgtaaccgcgagaagaaggacaccaggcactcctacaactgccgggtg
gccgagtccacccaccagcaccaccccaagaagccctcgcgccagatccacaaaggcgac
atcaccctggtgcccacggtgaacggcaccctgccaatcagagctcaccaccgctcgccc
tcggccacgccccccctggacagagcccagatgggaagccggcagaaccaccacagccgc
cagtccctcaacagcctggtgaccatctcgtccaatcacatcccagagagcttcgccctg
gaactggcacatgcgactccaccagtagagcaagtctcacagcttctgtccatgctccat
cagggccagtaccagcccagacccagtttccgtggcaacaaatactcccgcagctacagg
tatgcattacaagacatggacaagttcagcctgaaggacagtggccgtggggacagcgag
gcgggggacagtgactgtgacatggggagggaatccccggtggacaggctcctgctgggg
gagggcttttctgacctcatacaccttgaaatgcaccaccggcttcacccagctatgaga
ttgtgcacggatgaatgtcgcatcctgggacactctgaccagtgttggatgccccccctc
tcctcgcccgccacctccgccgactatcgcaacaacatgtacattcctggggaggagtcc
gcccagcagccccccatcgacgacgaccagtcctccgtcgactccgagcaccgcaagagc
ttctccacttttggcaaagagcccggcagcgaggaggcggcggccgggggcgtggctgcg
ggagcaggaggcgacgcgtgcgcggccggaggggggggcggctccctcctcacggagatg
aactccgtgttccagcggctcctccccccgaacatggactcgtacgccgagtgcagtgaa
acaagtccgccctcggcctcgtcggccgcagagagagggagcggacggaacaacgccgtt
ccccaggacaatcggagggggttgttgccgggcgggaagggccccgcctacccgccgggc
gtggccgcgtgggcggccaacactcactacctaaaccctgggagcggatccgtggcgagc
aaccagccctcgtccacctccacctccacctccaccaacggacagccgccgcacctcaag
tggctgccggccatggaggagatcccggagaactacgaggaggacgactttgacggcgtc
tttcatcagggtcacgcgggcggcaagcgcggcgacggccgccatgagccgggcatagac
agcagcgagctggtgcacgagatcaacaagctgctgcaggacgtcaggcagaactag
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