Betta splendens (Siamese fighting fish): 114859012
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Entry
114859012 CDS
T08231
Symbol
samhd1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl03250
Viral life cycle - HIV-1
bspl04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
114859012 (samhd1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
114859012 (samhd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bspl03400
]
114859012 (samhd1)
DNA repair and recombination proteins [BR:
bspl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
114859012 (samhd1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_2
HD
SAM_1
Npa1
PDEase_I
HD_assoc_2
Motif
Other DBs
NCBI-GeneID:
114859012
NCBI-ProteinID:
XP_029012663
UniProt:
A0A6P7N2E1
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Position
7:complement(3157910..3163528)
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AA seq
627 aa
AA seq
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MATRKRPLMEDSSPADSFSTPEKKVSVVPQPQTETETEYASWGVEGTCAYLRREGLEQWE
DAFRDHGIKGSGLRYLGDAELEKMGVKLLGDRLQILHSFRRLWEIKAEPSKVFNDPIHGH
VELHPLLIRIIDTPQFQRLRHLKQLGGTYFVFPGASHNRFEHSIGVGHLAGELVQALNNR
QPELLISRRDILCVQIAGLCHDLGHGPFSHMFDGMFIPRARPGYAWKHEKASVQMFDYLV
AVNHLEPVMEQHGLVLPDDLHFIKEQIAGPLDTDAAEGQKWPYKGRTENKSFLYEIVANK
RNGIDVDKWDYFARDCYHLGIQNNFDYRRFLKFARVCDVKGQKHICTRDKEVGNLYDMFH
TRNCLHRRAYQHKVGNIIETMITEAFLKADEHIRIRGSGGQMFTLSTAIDDMEAFTKLTD
HVFEQILNSSSSELDEARQILQNIVCRRLYKCLGQTQAGKPTTVTQDTIHSWEADLAQAV
PLSGATGVALQPEDFVVSVINMDYGMKEKNPINKVHFYCKEDVTKAIKIRRNQVSQLLPE
QFAEQLIRVYYKRKDEASLEAAKKHFVQWCMNKNFSKPRDADIMAPELTPLKPSWGSSLE
GDEEDGSSRTSNPGALNGTKAKTQLSF
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggcgactcgtaaacgtccgttgatggaagattcgagccccgctgacagcttctccacc
ccggagaagaaggtgtccgttgtcccgcagccgcagacggagacggagacggagtacgcg
agctggggagtggagggaacgtgtgcgtacctacggagagaagggctggagcagtgggag
gatgcgttcagagatcacggcatcaaaggctccgggctgcggtacctcggtgatgctgag
ctggagaagatgggcgtcaagcttctgggcgaccgtctgcagatcctgcacagcttcagg
aggctgtgggagattaaagcggagccgagcaaggtgttcaatgatccgatccacggacac
gtggagttgcacccgcttctcatcagaatcatcgacacccctcagttccagaggctgcgg
cacctgaagcagctgggagggacctacttcgttttccctggggcttcacacaaccgcttc
gaacactccattggggtgggtcacttggcaggagaacttgtccaagccctgaacaaccgg
cagccagagctcctcatctcccgcagagacatcctgtgcgtgcagatcgccggcctctgt
cacgacctgggtcacggcccgttttcccacatgtttgacgggatgttcatccccagagcc
cgtcctggatacgcctggaagcatgagaaggcctctgtacaaatgtttgactacctggtc
gccgtcaaccacctggagccggtgatggagcagcacggcctggtgctgccagacgacctg
cacttcatcaaggagcagatcgctggaccgctggacacggacgccgctgaaggccagaag
tggccgtataaaggccgcacagaaaacaagtccttcctttatgaaattgtggcaaacaaa
aggaatggcatcgatgtggacaagtgggactactttgccagggactgctaccacctcggc
atccaaaacaactttgactaccgccgcttcctgaagtttgccagggtgtgtgatgtgaaa
gggcagaagcacatctgcacccgggacaaggaggtggggaacctgtacgacatgttccac
acgaggaactgtctgcacagacgagcgtaccagcacaaagtgggcaacatcatagagacc
atgattacggaggccttcctgaaagcagatgaacacatcaggatcagaggctcgggagga
cagatgttcactctctccacagccatcgatgacatggaggccttcaccaaactcacggat
cacgtgtttgaacagatactgaactcctcctcctctgagctggatgaagccaggcagatc
ctgcaaaacatcgtgtgtcgccgcctctacaagtgtctgggccaaacgcaggcaggaaaa
cccacgactgtgacccaggacacgattcacagctgggaagcagatctggctcaggccgtg
cctctgagcggcgccaccggcgtcgcgctgcagccggaggacttcgtcgtcagcgtcatt
aatatggactatgggatgaaggagaagaaccccatcaacaaagtgcatttttactgcaag
gaagacgtgactaaagccatcaagatacgcaggaaccaggtttctcaactgcttccagaa
cagtttgctgagcagctgatccgggtctactacaagaggaaggatgaagccagcctggaa
gccgccaagaagcactttgtccagtggtgcatgaacaaaaacttctcgaagcctcgggac
gcagacataatggcgcctgagctgacgccactgaagcccagctggggaagcagcctcgaa
ggcgacgaagaagacggcagctcccgaacgtcgaacccgggcgccctcaacggaacgaaa
gccaaaacgcagctcagcttttaa
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