Betta splendens (Siamese fighting fish): 114859788
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Entry
114859788 CDS
T08231
Symbol
rad23aa
Name
(RefSeq) RAD23 homolog A, nucleotide excision repair protein a
KO
K10839
UV excision repair protein RAD23
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl03420
Nucleotide excision repair
bspl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
114859788 (rad23aa)
09124 Replication and repair
03420 Nucleotide excision repair
114859788 (rad23aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
bspl03051
]
114859788 (rad23aa)
03400 DNA repair and recombination proteins [BR:
bspl03400
]
114859788 (rad23aa)
Proteasome [BR:
bspl03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
114859788 (rad23aa)
DNA repair and recombination proteins [BR:
bspl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
114859788 (rad23aa)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
Rad60-SLD_2
UBA_3
Crinkler
Dsc3_N
SWI-SNF_Ssr4_C
Ubiquitin_2
OTU1_UBXL
DUF3306
Motif
Other DBs
NCBI-GeneID:
114859788
NCBI-ProteinID:
XP_029013598
UniProt:
A0A6P7N567
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Position
8:14230521..14236633
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AA seq
367 aa
AA seq
DB search
MQITLKTLQQQTIQIEIDPEQTVKALKEKIEAERGKDNFPVSGQKLIYAGKILQDDTPIK
DYKIDEKNFVVVMVSKAKPTAAASPPVSEAPKPSVQDSGSSSTAAPATAPASAPAPAPAQ
AAVPIPPEEAKEDLSAAPTEPQQPASSSSGSQGLDASSALVTGAEYESMLTEIMSMGYER
ERVVAALRASFNNPHRAVEYLLTGIPSSPIQESNPPPQAPASGPTESPSLAEGDNPLAFL
RTQPQFLHMRQAIQQNPSLLPALLQQLGRENPQLLQQISQHQELFIQMLNEPVGEGGDAP
EVGELGAAGEEGAPVNYIQVTPQEKEAIERLKALGFPEALVIQAYFACEKNENLAANFLL
NQGLEDD
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcacacttaaaacactgcaacagcagactattcagattgagatagaccccgag
caaacggttaaggccttgaaagagaagatagaagcagaaaggggaaaggacaactttcct
gtgtccgggcagaagctcatatacgctggaaaaattctgcaagatgacacacccatcaag
gactacaaaattgatgagaagaattttgttgtagtgatggtgtccaaggctaaacctaca
gctgccgcctcgcccccagtatcagaagcgcccaagccctctgtacaggactctggctcc
tcatcaacagctgccccggccacagccccagcttcagccccagccccagccccagcccaa
gcagctgtccccattccacctgaagaggccaaagaagatctaagtgctgcccccacagaa
ccacaacaaccagccagctccagcagtggaagccagggtttggatgcctcttcagcactg
gtgactggagctgagtatgagtcaatgctaacagagatcatgtctatgggctatgaaaga
gagagagtggtggctgcactacgggctagtttcaacaacccccacagagctgtggaatat
cttctgactggtatacccagcagcccaatacaggagtctaaccccccaccgcaggcccct
gcttctggacctacagaatccccgtctctagcagagggagacaacccacttgctttcctg
cggacccagccccagtttctgcacatgagacaggccatccagcagaatccctctctgcta
ccagcccttctccagcagctaggcagggagaatcctcaacttctacagcaaatcagtcag
catcaggagctgttcatccagatgttgaacgaacctgtgggagaggggggagacgcacca
gaggttggagagttgggggcagcaggggaagagggcgcacctgtcaactacatccaagtt
acacctcaggagaaggaagccatcgaaaggctaaaagcattgggtttccctgaggcccta
gtgatccaggcctactttgcatgtgagaagaacgagaacctggcagccaactttctcctc
aaccagggactggaggatgactga
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