Betta splendens (Siamese fighting fish): 114860128
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Entry
114860128 CDS
T08231
Symbol
smarca4a
Name
(RefSeq) SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4a isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114860128 (smarca4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bspl03021
]
114860128 (smarca4a)
03036 Chromosome and associated proteins [BR:
bspl03036
]
114860128 (smarca4a)
Transcription machinery [BR:
bspl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
114860128 (smarca4a)
Chromosome and associated proteins [BR:
bspl03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
114860128 (smarca4a)
Chromatin remodeling factors
BAF complex
114860128 (smarca4a)
PBAF complex
114860128 (smarca4a)
GBAF(ncBAF) complex
114860128 (smarca4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
114860128
NCBI-ProteinID:
XP_029014297
UniProt:
A0A6P7N4N2
LinkDB
All DBs
Position
8:823030..834276
Genome browser
AA seq
1638 aa
AA seq
DB search
MSTPDPPMGGTPRPGPSPGPGPSPSGMMGPSPGPSPGSAHSMMGPSPGPPGSGHPHPPQG
PSGYPQDNMHQMHKPMEAMHEKGMPDDPRYGQMKGMAMRPGGHSGMGPPPSPMDQHSQGY
PSPLGGSEHAPSPVPANGPPSGPMMPGGPPGPGAGPMEGSGDPSQGMGQPNRGGPPGPGG
PGGAGGGPGGPGGPTPFNQNQLHQLRAQIMAYKMLARSQPLPEHLQMAVQGKRPMPGMQQ
PPMPNMPPSTGPGAGPGPGPAQANYSRPHGMVGPNMAPPGPTGVPPGIQGQPTNGPPKSW
PEGPMVNAAAPSNPPQKLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPPPMML
HQKQNRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELK
ALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQE
RKRRQKHQEYLNSILQHAKDFKEYHRSITAKIQKATKAVATYHANTEREQKKENERIEKE
RMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRAHKAAQALKEKKKKKK
KKKPEPAEGGAAALGPDGEPLDETSQMSDLPVKVIHVDSGKILTGVDAPKAGQLEAWLEM
NPGYEVAPRSDSEDSGSEDDEEEEDVDEEPHPTASEEKKKIPDPDSEDVSEVDVRHIIEH
AKQDVDDEYGNAAFNRGLQSYYAVAHAVTEKVDKQSTLLVNGQLKQYQIKGLEWLVSLYN
NNLNGILADEMGLGKTIQTIALITYLMEYKRLNGPFLIIVPLSTLSNWVYEFDKWAPSVV
KVSYKGSPAARRSFVPILRSGKFNVLLTTYEYIIKDKHILAKLRWKYMIVDEGHRMKNHH
CKLTQVLNTHYLAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMT
GEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRH
MQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGYSGGIV
TGPDLYRASGKFELLDRILPKLRATKHKVLLFCQMTSLMTIMEDYFAYRNFKYLRLDGTT
KAEDRGMLLKTFNDPASEYFVFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRA
HRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSGYERRAFLQAI
LEHEEQDEVGARGGCRTRGAWEEDEVPDDETVNQMIARSEEEFEQFMRMDLDRRREEARN
PKRKPRLMEEDDMPAWILKDDAEVERLTCEEEEEKMFGRGSRQRKEVDYSDSLTEKQWLK
AIEEGNLEDIEEEVRHKKTTRKRKRERDHDSGAALPSSSGGRGRDKDEEVKKAKKRGRPP
AEKLSPNPPSLTKKMKKIVDAVIKYKDTNGRQLSEVFIQLPSRKELPEYYELIRKPVDFR
KIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKDD
ESEGEESEEEEEEADEGSESESRSVKVKIKLSRKEKGDRGGKGQRWRGRGSRAKPVVSDD
DSEEEQEEERSASGSEDD
NT seq
4917 nt
NT seq
+upstream
nt +downstream
nt
atgtccactcctgacccccccatgggagggacacctcgtcctggaccctccccaggccca
gggccatctcctagcggcatgatgggtccaagtccaggtccctcaccgggctcagcccac
agcatgatgggacccagcccaggacctccaggctctggacacccccaccctccacaggga
ccatcaggatatcctcaggacaacatgcaccagatgcacaaacccatggaagccatgcat
gagaagggaatgcctgacgacccgcgctatggccagatgaagggcatggctatgagacca
ggggggcacagcgggatgggaccccctccaagcccgatggaccagcattcccaaggttac
ccctcgcccctgggaggctcagagcacgctcccagccccgtcccagccaacggacctccc
tctgggcccatgatgcctggaggtccccctgggcctggtgctggccctatggaaggcagc
ggcgaccccagtcaaggcatggggcagcctaaccgtggaggtcctcctgggccaggtgga
ccgggtggggcaggaggtggaccaggaggcccaggtggaccaactccttttaaccagaat
caactgcaccaactccgggctcagattatggcatataagatgctggcgcgcagtcagccc
ctccctgagcacctgcagatggctgtgcaggggaagaggcccatgccagggatgcagcaa
ccaccaatgcccaacatgcccccatccacaggacctggagccgggcctgggccaggacca
gcacaggccaactacagcagaccacatggcatggttggccccaatatggctcctcccgga
cctaccggagtccccccaggcatacagggccagcctaccaatggaccccccaagtcatgg
cctgaaggaccaatggtgaatgctgcagctccctccaaccctcctcagaagctgattccc
ccacagcccacaggcagaccctcccctgctcctcccgctgtgcccccagccgcttccccg
gtgatgccgcctcagacgcagtccccagggcagcccgcccagccccctcccatgatgctc
caccagaagcagaaccgcataactcccatccaaaaaccgcgtgggctggacccagtggag
atccttcaggagagagaatacaggctgcaggcccgtattgctcatcgcatccaggaactg
gagaacctgcctggctctctagccggagacctgcgcacgaaggccaccatcgagctaaag
gccctgaggctgctgaacttccagagacagctgcgtcaggaggtggtggtctgcatgcgt
cgggacactgctttggaaaccgccctcaacgctaaagcctacaagcgcagcaagcgccag
tcgctgcgtgaagctcgcatcacggagaagctggagaagcagcagaagatcgaacaggag
cgcaaacgtcgtcagaagcaccaggaatacctcaacagcatcctgcagcacgccaaggac
ttcaaggagtatcaccgctccatcacagccaagatccagaaggccaccaaagctgtggcc
acgtatcacgccaacacggagcgtgagcagaagaaggagaacgagcgcattgaaaaagag
agaatgcggaggctgatggctgaggatgaagaaggctatcgtaaacttatcgaccagaag
aaggacaagcgtctggcctacctgctccagcagacggacgagtacgtggccaacctcact
gagctggtccgtgctcacaaagctgcacaagctctcaaagagaagaagaagaagaagaaa
aagaagaagccggagccggcagaaggtggcgctgctgcgctgggccctgacggggagcct
ttagatgagaccagtcagatgagtgacctgccggtgaaggtcatccacgttgacagcggg
aagatcctgactggagttgatgcacctaaagccggtcagctggaggcctggctggagatg
aacccagggtatgaagtcgctccgcggtcagacagtgaagacagtggttcagaagatgat
gaagaggaggaggatgtagacgaggagcctcatcccacagcttcagaggagaagaagaag
attccagaccctgacagcgaagacgtgtctgaggtggacgtcaggcacatcattgaacac
gccaagcaggatgtggacgacgagtacggcaacgcagccttcaaccgaggccttcagtcc
tactacgccgtggctcacgccgtcactgagaaggtggataagcagtcgacgctgctggtc
aacgggcagctgaagcagtaccagatcaaaggactggagtggctggtgtcgctctacaac
aacaacctgaacggcatcctggccgacgagatgggtctgggaaagaccatccagaccatc
gccctcatcacttacctcatggagtacaagcgcctcaacgggcccttccttatcatcgta
cctctgtcaacgctgtcaaactgggtctatgagtttgataagtgggcgccgtctgtcgtg
aaggtctcctacaaggggtctccggctgctcgccgctccttcgttcccatcctgcgcagc
ggcaagttcaacgtgctgctcaccacgtacgagtacatcatcaaggacaaacacatcctg
gctaaactccgatggaagtacatgattgtggacgagggccaccgtatgaagaaccaccac
tgtaagctgacccaggtgctgaacacgcactacttggcaccgcggcgcctgctgctcaca
gggactccgctgcagaataaactgcccgagctgtgggctctgctcaacttcctactgccc
accatattcaagagctgcagcaccttcgagcagtggttcaacgccccgtttgccatgacg
ggagagaaggtcgacctgaacgaggaagaaaccatcctgatcatcagacgtctgcacaaa
gtgctgcgaccgttcctgctgcgccggctcaagaaggaggttgaagcgcagctgccggag
aaggtggagtatgtgataaagtgcgacatgtcggctttacagcgggtcttatacagacac
atgcaggcgaagggagtcctgctcacagacggctccgagaaggacaagaagggtaaagga
ggcacgaagaccctgatgaacaccatcatgcagctgaggaagatttgcaaccacccgtac
atgttccagcacattgaggagtccttctcagagcatctgggttattctggtggaatagtg
acggggcctgatctgtatcgagcgtcagggaagttcgagctgctggatcgtatcttgccc
aaactcagggccaccaagcacaaagtgctgctcttctgtcagatgacttcactcatgacc
atcatggaggattactttgcttaccgcaacttcaagtacctgcgtctggacggaacgacc
aaggccgaggaccgtggcatgctgctgaagaccttcaatgacccagcctccgagtacttt
gtgttcctgctcagcaccagggctggaggcctgggcctcaacctgcagtctgctgacacc
gtcatcatctttgacagtgactggaacccgcaccaggacctgcaggcccaggaccgagcc
caccgcatcggccagcagaacgaggtgcgcgtgctgcggctctgcaccgtcaacagcgtg
gaagagaagattctggctgcagccaagtacaagctgaacgtggaccagaaggtcatccag
gccggcatgttcgaccagaagtcctcaggctatgagcgccgcgccttcttacaggccatt
ctggagcacgaggagcaggacgaggtcggggctcgaggaggctgccgcactaggggggcg
tgggaggaagatgaggtgcctgacgacgagactgtgaatcagatgatcgcaagaagtgag
gaggagtttgagcagttcatgcgcatggatctggaccggcgccgcgaggaggcccgcaac
cctaaaaggaaaccccgtctgatggaggaggacgatatgcccgcctggattttgaaagac
gacgccgaggtggagcgtctgacctgcgaagaggaggaggagaagatgttcggcagaggc
tcgcgtcagcggaaggaggtggactacagcgactcgctcacggagaaacagtggctgaag
gccatagaggagggaaacctagaggacatcgaagaggaagtccggcacaaaaagaccacc
aggaagcgcaagcgagagcgcgaccacgacagcggcgcggctctgccgagctccagcggc
ggccgcgggcgggacaaagacgaggaggtgaagaaggccaagaaacgcgggcgtccgcca
gcggagaagctgtctcccaacccgccctccctcaccaagaagatgaagaagatcgtcgac
gccgtcatcaaatacaaggacacgaacgggcgacagctgagcgaagtgttcatccagctt
ccttcccggaaggagctgcccgagtactacgagctgatccgcaaacccgtggacttcaga
aagatcaaggagaggatccgcaaccataagtaccgcagcctgaacgacctggagaaggac
gtgatgctgctctgtcagaacgctcagaccttcaacctggagggttctctgatctacgag
gactccatcgtgctgcagtcggtcttcaccagcgtgagacagaaaatcgaaaaggacgac
gagagcgaaggggaggagagcgaggaggaggaggaggaggcggacgaaggctctgagtct
gaatctcgttcagtgaaagtaaagattaagctgagccggaaggagaagggcgacagagga
ggaaagggccaacgctggaggggccgcggctcccgggccaaacctgtggttagcgacgac
gacagcgaggaggagcaggaggaggagcgctcggccagcggcagcgaggacgactga
DBGET
integrated database retrieval system
