Betta splendens (Siamese fighting fish): 114860200
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Entry
114860200 CDS
T08231
Symbol
utp18
Name
(RefSeq) U3 small nucleolar RNA-associated protein 18 homolog isoform X1
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
114860200 (utp18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bspl03009
]
114860200 (utp18)
Ribosome biogenesis [BR:
bspl03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
114860200 (utp18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
WDR55
WD40
WD40_WDHD1_1st
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_NUP159_NUP214
WD40_RFWD3
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_NOL10_N
Beta-prop_EIPR1
Beta-prop_IFT80_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_HPS5
KNTC1_N
Beta-prop_TEP1_C
Beta-prop_VPS8
DUF7099
Motif
Other DBs
NCBI-GeneID:
114860200
NCBI-ProteinID:
XP_029014452
UniProt:
A0A6P7N5A2
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Position
8:390820..394703
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AA seq
550 aa
AA seq
DB search
MEDENVIKLPLTKKSAAAAKRPPLTKADPEKEARKRQKNAESVAVLGETDSSVKLLEHLV
FGAEDELVERLVADEESGNLLLEDRDEESDNEEAVRHQLQPSKTAAWVDEDDELEEEVDM
RHRFRRDLMRGDTESTMSKQKLQQRMKEQFQKSMGGTPSWAESSSKKKKTTGSDKQRIYW
CFYFCSSPACCIPEHLFDPAGDDDDEEEDDLLRRTGNFVGSPDRLPGGILAMKRCCDANK
ARPSEDRLSSVQFHPSAQVVMTAGLDHSISLFQVDGLTNPKIQSIHLEQFPIHKAQFSLD
GETVIATGMKNKMFYLYDMMEGRITPVNSIRGLNETRVKEFQVCPEGGTLLLTGTNGYLH
LLTLKTKEVVHSVKMNGSVSGAAFSSDGSKLFANSDEGEVYVWDMRSSRCMNRFADDGCV
KGTSIAASRDSRLLACGSHSGVVNVYSLESCLHSPNPKPLKSLMNLLTVVSSLTFNPTSD
ILAIASRAEDEAVRLIHLPSLTAFSNFGVTARKVIYRASCLDFSPHSGFFSLANNRGRAL
LYRLLHYKDF
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggaggatgagaacgttatcaaactgccgctaacgaagaagagcgcagctgccgccaag
agacctccactgacgaaagcagacccggagaaggaggctcggaaacggcagaagaacgca
gagagtgtggcggtgctgggagagacggacagctctgtgaagctgctggagcatctggtg
tttggagcggaagatgagctggtggagagactggtggcggacgaggagtctggaaacctg
ttgctcgaggacagagatgaagagtcggacaatgaggaggctgtgcgccaccagttgcag
cccagcaaaacagccgcctgggttgatgaagacgatgagctggaggaagaggtggacatg
aggcatcgcttccgcagagacctgatgcgaggagacacagagtccaccatgtccaaacag
aagctacagcagaggatgaaggagcagtttcagaagtcaatgggaggaactccatcatgg
gcagagagcagctccaagaaaaagaagacaacaggtagcgacaagcaaagaatttactgg
tgcttctatttctgcagtagtcctgcctgttgcatacctgaacatctgtttgaccctgca
ggtgatgatgatgatgaagaggaagacgatttgctaaggaggacgggaaacttcgtggga
tctccagaccgtttgcctggaggcatcctggcgatgaaaaggtgctgtgacgcgaacaag
gctcgtccatcagaggacagactgtccagcgtccagttccacccctcagctcaggtcgtc
atgacggccggcctcgatcactccatctccctgtttcaggtggatggactgacaaaccca
aagatccagagcatccacctggagcagttccccatccacaaagctcagttcagcctggac
ggagagacggtgatcgccaccggcatgaaaaacaagatgttctacctgtacgacatgatg
gagggacggatcacacctgtaaacagcatcagaggtctgaatgaaaccagagtgaaggag
ttccaggtgtgtcctgaggggggcactctgctactcacaggaaccaacggatacctgcac
ctgctcacactcaagacgaaggaggtggttcacagtgtgaagatgaatggcagcgtcagc
ggcgccgccttctccagcgacggcagcaaactcttcgctaactcagatgagggtgaagtg
tatgtgtgggacatgcgcagcagtcggtgtatgaaccggttcgcagacgacgggtgtgtg
aagggaacgtccatcgccgcctcacgcgacagtcggttattggcctgcgggtcccattcg
ggcgtggtcaacgtctactctctggagtcgtgtctacattcacccaatccaaagcctctg
aagtcgttgatgaacctgctgacggtagtgagctcactgacctttaaccccacgtcagac
atccttgccatcgcgtcccgtgctgaggacgaggctgttcgcctgatccacctgccaagt
ctcaccgccttctccaactttggcgtcaccgcgaggaaggtcatttaccgagcaagctgc
ctcgacttctccccgcacagcggcttcttctcgctggctaataaccgaggacgcgccctc
ctctacaggctgctgcactacaaagacttctga
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integrated database retrieval system
