Betta splendens (Siamese fighting fish): 114860628 Help Entry 114860628         CDS       T08231                                  Symbol col1a1a Name (RefSeq) collagen, type I, alpha 1a   KO K06236   collagen type I alpha Organism bspl  Betta splendens (Siamese fighting fish) Pathway bspl04510   Focal adhesion bspl04512   ECM-receptor interaction bspl04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:bspl00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     114860628 (col1a1a)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     114860628 (col1a1a)   09142 Cell motility    04820 Cytoskeleton in muscle cells     114860628 (col1a1a)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:bspl00536]     114860628 (col1a1a) Glycosaminoglycan binding proteins [BR:bspl00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    114860628 (col1a1a) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI VWC Motif Other DBs NCBI-GeneID:  114860628 NCBI-ProteinID:  XP_029015179 UniProt:  A0A6P7NBJ9 LinkDB All DBs Position 8:15516374..15535768 Genome browser AA seq 1447 aa AA seqDB search MFSFVDLRLALLLSAAVFLVRAQGEDDRTGGSCTMDGQVFADRDVWKPEPCQICVCDSGT VMCDEVICEDTADCPNPIIPHDECCPICPDEGSPVGPVEGPKGERGPKGDRGPPGPPGRD GMPGQPGLPGPPGPPGPPGLGGNFSPQMSGGFDEKSPAMPVPGPMGPMGPRGPPGPPGAS GPQGFTGPPGESGEAGAAGPMGPRGPAGPPGKNGEDGESGKPGRAGERGPSGPQGARGFP GTPGLPGIKGHRGFSGLDGAKGETGPAGPKGESGAPGENGTPGAMGPRGLPGERGRTGAN GAAGARGNDGAAGAAGPPGPTGPAGPAGFPGGPGAKGDAGPQGARGPEGPAGARGEAGNP GPAGPAGPAGNPGADGAPGAKGAPGAAGVAGAPGFPGPRGPPGPQGAAGAAGPKGNTGEI GAPGAKGEAGPKGEAGVPGVQGPPGPHGEEGKRGARGEPGAAGARGAPGERGAPGGRGFP GSDGPAGLKGAPGERGAPGLVGAKGATGEPGRTGEPGLPGAKGMTGSPGSPGPDGKTGAA GAPGQDGRPGPPGPVGARGQPGVMGFPGPKGAAGEGGKPGERGVMGPTGPTGAPGKDGDV GAPGASGPAGPAGERGEQGPAGSPGFQGLPGPQGAVGESGKPGEQGLPGEAGAPGPAGAR GDRGFPGERGAPGAAGPVGPRGSPGSAGNDGAKGDAGAPGAPGAQGPPGLQGMPGERGAA GLPGLRGDRGDQGAKGADGAPGKDGARGLTGPIGLPGPAGAPGDKGEPGAAGPLGPAGAR GAPGERGEAGPPGPAGFAGPPGADGQPGAKGEAGDNGAKGDAGPPGPAGPTGAPGPQGPV GNTGPKGARGPAGPPGATGFPGAAGRVGPPGPSGSSGPPGPAGPAGKEGPKGNRGETGPA GRPGEIGAAGPPGPAGEKGNPGAEGASGSAGLPGPQGINGQRGIVGLPGQRGERGFPGMP GAVGEAGKQGPGGPVGERGPPGPMGPPGLAGAPGEPGREGTPGNEGAAGRDGAPGPKGDR GESGPGGATGAPGPPGAPGPVGPAGKSGDRGETGPAGPAGAAGPAGPRGPAGAPGLRGDK GETGEAGERGMKGHRGFTGMQGPPGPAGPSGEQGPAGTSGPAGPRGPAGAAGAAGKDGMS GLPGPTGPPGPRGRSGEMGPAGPPGPPGPPGAPGAPGGGFDMGFISQPQEKAPDPFRMYR ADDANVLRDRDLEVDSTLKSLSQQIEQIRSPDGTRKNPARTCRDLKMCHPDWKSGEYWID PDQGCTQDAIKVYCNMETGETCVSPVQREVAKKNWYISKNIKEKKHVWFGEAMNDGFQFE YGSEGSQPEDVNIQLTFLRLMSTEASQNLTYHCKNSVAYMDTSAGNLKKALLLQGSNEIE IRAEGNSRFTYSVLEDGCTSHTGTWGKTIIDYKTSKTSRLPIIDIAPMDVGAPDQEFGFE VGPVCFL NT seq 4344 nt NT seq  +upstreamnt  +downstreamnt atgttcagctttgtggatttgcggctggcactgctgctcagcgcagcagtgttcctggtc agagcgcagggcgaggacgatcgtacaggcgggagctgcaccatggacggccaggtgttt gcagaccgggatgtgtggaagccagagccatgtcagatctgtgtatgtgacagtggcaca gtgatgtgtgatgaagtcatctgcgaagacacagcagattgcccaaacccaatcatcccc cacgacgagtgctgccccatctgcccagacgaaggttctccggtgggaccggtggaggga cccaagggagagcgtgggcccaaaggagacaggggtcctcctggcccccctggtagagat ggtatgcctggccagcccggactgcctggacctcccggcccccctggacctcctggcctt ggtggaaacttctcccctcagatgtctggtggctttgatgagaaatcccctgctatgcct gtgcctggacccatgggcccaatgggaccccgtggaccccctggacctcctggtgctagt ggacctcagggattcactggcccccctggtgagtctggagaggctggagctgctggtccc atgggtcctcgtggccccgctggcccccctggaaagaacggagaggatggtgagtctggc aaacctggtcgcgctggtgagcgcggaccttctggcccacaaggagctcgtggtttccca ggaacccctggtttgcctggaatcaagggacatagaggattcagtggtctggatggtgct aagggagaaactggccctgctggacccaagggagagtctggtgcccctggtgagaatgga actcctggtgctatgggacctcgtggtttgcccggtgagagaggtcgcactggtgctaat ggagctgctggagctcgtggtaatgatggtgctgctggtgccgctggacctccaggtcca actggccccgctggccctgctggattccctggtggccctggagccaagggtgacgccgga cctcagggtgctcgtggacccgagggccctgctggagcccgtggtgaggctggaaaccct ggacctgctggcccagctggacctgctggaaacccaggagctgatggtgcacctggagcc aagggagcccctggtgctgcaggagttgctggtgctcctggtttccctggacctcgtgga cccccaggacctcagggtgctgctggtgccgctggacccaagggtaacactggtgaaatt ggtgccccaggagccaagggagaggctggtccaaagggtgaggctggtgttccaggagtt cagggacccccgggacctcatggtgaggagggcaagagaggggccagaggagagcctggt gctgcaggagctcgtggagcacctggagagcgtggtgcccctggtggtcgtggtttccct ggttctgatggccctgctgggcttaaaggcgcccctggtgagcgtggtgccccaggtctt gttggagcaaaaggtgccactggtgaacctggccgcactggtgaacctggtttgcctgga gctaagggaatgactggcagccctggcagtcctggacctgatggcaagacaggagctgct ggagctcctggtcaagatggtcgtcctggacctcctggccctgttggagctagaggccag cctggtgtaatgggattccctggaccaaaaggagctgctggtgagggtggaaagcctggt gaaagaggagtaatgggacccactggtcctactggtgcccctggtaaagatggtgatgtt ggtgctcctggtgcctctggacctgctggtcctgctggtgagagaggagagcagggacct gctggatctcctggattccaaggtcttccaggaccccagggtgctgttggtgagtctgga aagcccggagagcagggtcttcccggtgaagctggagcccctggacctgctggagctaga ggtgatagaggattccctggtgagcgtggtgcacctggtgctgctggacccgttggtcct cgtggatcccctggttctgctggaaatgatggtgctaagggagatgctggtgcccctggt gcgcctggggctcagggtcctcctggactacagggaatgcctggtgagcgtggtgctgct ggtcttccaggattgagaggagacagaggtgatcaaggtgctaagggggctgatggggct cctggcaaggatggtgctcgtggtttgactggaccaattggacttccaggacctgctgga gcccctggagacaagggcgagcctggtgccgctggacctcttggacccgctggagctcgt ggagcccctggtgagcgtggagaagccggaccacctggacctgctggctttgctggaccc cctggtgctgatggacagcctggtgctaaaggagaggctggagataatggtgctaaagga gatgccggcccccctggtcctgctggacccactggtgcccctggacctcagggtcctgta gggaatactggtcctaagggtgcccgtggacctgctggtcctcctggtgctactggattc cctggtgctgctggcagagttggacctcctggcccctctggtagttctggtcctcctgga cctgctggaccagctggcaaagagggacccaaaggaaaccgtggtgagactggacctgct ggacgccctggtgagataggtgctgctggcccaccaggacctgctggagagaagggtaac cctggtgctgagggtgcttctggtagtgctggtctgcctggacctcagggtattaatgga cagcgtggtattgttggtctgccaggacaaagaggagagagaggtttccctggcatgcct ggcgctgttggagaggctggaaagcagggacctggtggccccgttggtgagcgtggacct cctggacccatgggaccacctggattggctggagcccctggagagccaggacgtgaggga acccctggtaatgagggagcagctgggcgtgatggagctcctggacccaagggagatcgt ggagagtctggccctggtggagccactggtgcccctggaccccctggtgcccctggacct gttggacctgctggaaagtctggtgaccgtggcgagactggacctgctggccctgctggt gctgctggccctgctggacctcgtggtcccgctggagctcctggccttcgtggagacaag ggagagactggagaggctggagagagaggcatgaagggacacagaggatttactggcatg cagggacctcctggacctgctggacctagtggagagcaaggacctgctggtacttctgga cctgctggacctagaggccctgctggagctgctggagctgctggtaaggatggtatgtct ggtcttcctggacctactggtcctcctggacctcgtggacgctctggagaaatgggacct gctggtcctcctggacctcctggacctcctggagcacctggtgcacctggtggtggattt gacatgggcttcatctcccagcctcaagagaaggcccctgatcccttccgtatgtaccgt gctgatgatgctaatgttcttcgtgaccgtgacctggaggttgacagcaccctaaagagc ctcagccagcagattgagcagatccgcagcccagatggaacacgcaagaaccctgccaga acctgccgtgacctaaagatgtgccaccctgactggaagagcggtgaatactggattgac cctgatcagggctgtactcaggatgccatcaaggtctactgcaacatggagactggtgag acttgtgtgtcaccagttcagcgtgaggttgccaagaagaactggtacatcagcaagaac attaaggagaagaagcatgtctggttcggagaggcaatgaatgatggcttccagtttgag tatggcagtgagggctctcagccagaagatgtcaacatccagcttaccttcctgcgtctc atgtccactgaggcatctcagaacctcacctatcactgcaagaacagtgttgcctacatg gacacctctgctggcaacctcaagaaggccctgctcctccagggctccaatgagattgag atcagagctgagggcaacagtcgcttcacctacagtgtactcgaggatggatgcacgtca cacaccggtacatggggcaaaacaatcattgactacaagacatcaaaaacatctcgcctc cctatcattgatattgctcctatggacgttggtgctccagaccaagagtttggctttgaa gttggacccgtctgtttcttgtaa

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