Betta splendens (Siamese fighting fish): 114860799
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Entry
114860799 CDS
T08231
Name
(RefSeq) trinucleotide repeat-containing gene 6A protein-like isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bspl03019
]
114860799
03036 Chromosome and associated proteins [BR:
bspl03036
]
114860799
Messenger RNA biogenesis [BR:
bspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114860799
Chromosome and associated proteins [BR:
bspl03036
]
Eukaryotic type
Gene silencing
piRNA pathway
114860799
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
114860799
NCBI-ProteinID:
XP_029015511
UniProt:
A0A6P7N7L8
LinkDB
All DBs
Position
8:3065706..3093449
Genome browser
AA seq
1874 aa
AA seq
DB search
MAPIRDSVSHSPNQTGLEHPGLDSQYEPSPWSSGSPCSSDSNSNWGKVLVDGSTDQPNNP
ASTNSSVWPPSSSSFSCSSSSSSSGCGSGSDPELASECMDADSSSSIGSEKNLATVAMTT
VMMMSANSSSSVSSTASSPSSAMMVGVSVNGDNNGNSHQIIGGGIGNVTGANNGNNIAGS
SHYSMAGSSSIGSNNMGIHNSKLVNSSGIWDTQSGSNMIITGGSTPCTNGGLNHGAWPQN
QAPSPVTQGLRPLQAQGMSSKLGIAPQQGPMLGWRDMAAQDNSSMMEESEVNNGTASSKV
LGSNNGGNGGLQSINLNTESNGPNNTIMMNTTTSTTTNATMTSSPPNSTASPQVSGDSSW
ASIGAGNGGLMANGHPLSAPQHPQVDLGGSGSFGTPWGATTYPGDKGPSNADTVNPQNAA
LMQAGNLKISSAAAFKSNNNHNNTGAPRWDQGPANNPNQPQNNLSWGIGSNQIPGSVGQT
PGNANQTTIGPPGGITRPWGSSASSSSSSSTSSTSNNKISNGEWGSAAPTNNTSDGGILK
GSSANNGWKSLEDDAIGMGVGGGGSHALGGVAGGWGRSGGSEGSGESSGGRSSSDRDSSQ
SKGGNRKKVTQTASAVSALARADVDPRVLSNTGWGQTPIRQNTAWDVNSPANNQHQGPRG
DERKHGSGASNWGAAAPAASSQTSGGWGGGPGTSGSDMGGSGWGEQRPTSGWDSKTPTSG
GGQSGWDDGSSYKGSNSNTWSNNINKDDRSNTWTNVAKPQQNWASSGGNGCEGWGSSGDG
SRGGANNHWGETHKGSNSVGWDSDSDRSGSGCWSDPNRTTTTTTTSSSSNNTWVGSGGSN
TPDQSTSNPGSNWGDSVHKPNPQSSTQSWGEPIKNNHGAQNWGEPNPKTSNEWGKGPESS
MARSNQSSAKSTGWQGGPIPTIGHKEEMSTGWEEPSPESIRRRMEIDDGTAAWGDPGKYS
GGSVNLWNKTSQSDQENTGPSSQHQSHPAHTSKHPSQPLQPPAAEKSCTSGWGEPYPKQK
ESSTWGEPTAAPPTTVDNGTSAWGKPMDSTWDEPNRDSGSGWGNQHKSRSKSMDTWCSDE
VSNSWDQEAEVEIGMWSNSQQENRSNDQNTWNYKHKGSNKINKPVNKQDEPWMKPFVNQF
SSMNFSRDSPDDSMKTGSGMVQDKRMDMGGMGDFNSVMGKNPVSRHQLHKDSAMDRSPYY
DKLSVSPSAYGNPAPDELSSNQSMGFPPSNSTQPIPCLDSGPTPARSSPGTARQNVNPMV
GGSSTAQGRGGPQSQAPHQPSLRNQVPPPILPSQVPPSLLKYPGSNSGLNPLFGPQQVAM
LNQLSQLSQLNQINQLQRLLLQQQQQQQQQQQQQQKAQNQRGMPLGRQTEQTRPIGSSPS
MMQPQRHLDPSLLKQPLPLKPYLDSYLSHNTSEMQKDALGPFSNFPLSLNSNLNVPLDMG
VSGGAMSYKELPQSRLKKLWATEPLEQNSKPGAMSSVLRPEDSPFYDFLSPGPSPLSPPG
QSVGSVGDGWPPRANSPPSHGNTVTWPPEFRPGEPWKGYPNIDPETDPYVTPGSVINNLS
INTVRDTDHLRDRNNGPSSSLNTTMPSNSAWSSIRASSHSGSLTSTAQSTSARPSESKWS
PGGSSVSNSSLAHELWKVPLSTKALSGAAPSRPPPGLTSQKPSPASTGWDGSALRWGGWS
SSESRYTPGSSWGDSSSSGRSQWLVLKNLTPQIDGSTLKTLCMQHGPLITFHLNLPHGNA
VVCYSSKDEATKAQKSLHMCVLGNTTILAEFASEEEINRFFAQGQSLATPSSGWQAIGSS
QSRMDQSHSFPGRASEPNQWNSSDLHSSSLWGRPNYSSSLWGSSSGNEAGRISSPSPISS
FLPVDHLTGGGDSM
NT seq
5625 nt
NT seq
+upstream
nt +downstream
nt
atggctcccattcgggattccgtcagccactctcctaatcaaacaggtctggagcaccct
ggtttggattcgcagtatgagccttccccctggtcctccggctctccctgcagcagcgac
agcaacagcaactggggcaaagtcctagtggacggaagcaccgaccaacccaacaaccct
gcttcgaccaactcctctgtctggcctccctcctcatcatctttctcttgctcctcatcc
tcttcctcttccggctgtgggtcggggtcagaccctgagctagcatcagaatgcatggat
gcagactctagctcctccatcggctcagagaaaaacctagccactgttgctatgacaacg
gtgatgatgatgtcagcaaactcttcttcctctgtgtcttctacggcttcctcgccctct
tctgccatgatggtcggcgtttctgtgaatggagacaacaatggtaacagtcatcagatt
attggtggaggaataggaaacgtcaccggtgcaaataatggaaataacatcgccgggtcc
tcccactactccatggctgggtctagcagtattggcagcaataacatgggtatccacaac
agtaagcttgtcaatagcagtggtatatgggacacccaatcaggcagcaacatgatcatc
acaggtggaagcaccccctgcaccaacggagggttaaaccatggtgcctggccacaaaat
caggccccaagcccagtgacccagggtctgcggcctctgcaggctcaagggatgagttcc
aaacttggtatagctcctcaacaaggccccatgttgggctggagagacatggcagctcaa
gacaacagcagcatgatggaagagtctgaggtgaataatggtacagcaagcagtaaagtg
ttaggaagcaacaacggtggaaatggtggcctgcagtctatcaatcttaacactgaatcc
aatggaccaaataacactattatgatgaatactactacttctactactactaacgccaca
atgacctctagtccaccaaactctaccgcctcaccccaagtcagtggggatagttcctgg
gcctccattggagcagggaatgggggtttgatggccaatggacaccccttatcagccccc
cagcacccccaagtagacctgggtggttctggatccttcggtacgccttggggcgctact
acctaccctggggacaagggcccctcaaatgcagacactgtgaacccccaaaacgctgcc
ctaatgcaggctgggaatctcaaaatctcctctgctgctgcttttaaaagtaataataac
cacaataacactggggccccacgctgggaccaggggcctgccaataacccaaaccaacct
cagaacaacttgtcctggggcattggctcgaatcagatccctggctccgtaggccaaaca
ccaggaaatgcaaaccaaactacaataggtcctcctggagggataacccgcccctgggga
agcagcgcatcatcttcctcatcatcatcaacctcttccacgtcaaacaacaagatatca
aatggagagtggggatcagccgctcctactaacaacacttcagatggtggaattctaaaa
ggaagctctgccaacaatggttggaagagcctggaggatgacgccatcggcatgggagtg
ggaggcggtggaagccatgccttaggaggcgttgctggaggctggggacgctcaggagga
agtgagggaagtggagagagctcaggaggccgatccagctcagacagagacagcagccag
tcaaaaggaggaaaccggaaaaaggtcacccagactgcatcagcagtatcagcactggct
cgggctgatgtggacccaagagttctttccaacactggatggggtcaaactcccataagg
caaaatactgcctgggacgttaattctcctgctaacaatcaacaccagggtcccagagga
gatgaaagaaaacatggcagtggtgcttcaaactggggagcagcagcaccggcagcttcc
tcccaaacctctggaggttgggggggtgggcctggtacctcagggtctgatatgggaggt
tctggctggggggagcagagaccaacctctggctgggacagcaaaaccccaacgagtggt
ggcgggcagagtggctgggatgatggatctagctacaaaggaagcaacagtaacacctgg
agcaacaacattaacaaagatgacaggtctaatacctggactaatgtggccaaaccacag
cagaactgggcttccagtggtggaaatggatgtgaaggatggggtagcagtggagatgga
tcaagaggtggtgccaacaatcactggggagagacccataaaggttcaaattctgttggc
tgggatagcgacagtgatcgatctggctctgggtgttggagcgatccaaaccgaaccact
accaccaccaccaccagcagcagcagcaacaacacttgggtaggaagtggagggtcaaat
actccagaccagagcacttcaaacccaggctccaactggggagactctgtccacaagccc
aatcctcagagcagcacccagtcctggggcgagccaataaagaacaaccatggagcccag
aactggggcgagcctaaccccaagacctccaatgagtggggaaagggtcctgaatccagt
atggccagaagcaatcaatcttctgccaagtccacaggttggcaaggaggccctataccc
acgataggtcacaaagaggaaatgtcaacagggtgggaagagccttccccagagtccata
cggcggaggatggagatcgatgatggaactgcagcttggggagaccctggtaaatacagt
ggtgggtctgtcaacttgtggaacaagactagtcaatcagaccaagagaacacagggccg
tcctctcagcaccagtctcaccctgcacacacctcgaaacacccatctcagccattgcag
cctcctgctgcggagaaaagctgcacttcaggttggggagagccgtaccccaagcagaag
gagtcatcaacgtggggcgagcctactgctgctccacccaccactgtggataatgggaca
tctgcctggggaaagcccatggactctacctgggatgaacccaacagagattctgggtct
ggatggggcaaccagcataaatctcgctccaagtccatggatacgtggtgtagcgatgag
gtgagcaacagctgggaccaggaagctgaggtggagattgggatgtggagcaacagccaa
caggagaacaggtccaacgaccaaaatacctggaactacaagcataaaggctcaaacaag
ataaacaaaccagtcaacaaacaggatgaaccctggatgaaaccttttgtcaaccagttc
agcagtatgaacttctctagagactcacctgacgactccatgaagacaggatcagggatg
gtgcaggacaagcgtatggatatgggcggcatgggagattttaacagcgtgatgggaaag
aaccctgtgtctcggcaccagctccacaaggactctgccatggatcgcagcccttactat
gacaagctgtctgtttctccctctgcttacggtaatccggctcctgatgagctctcctcc
aatcaaagcatgggctttcccccttccaattctactcagcctatcccctgtctcgactct
gggccaacccctgcccgttctagtcctgggactgctcggcagaatgtaaaccctatggtg
ggtggcagcagtacagcacagggccgaggtggcccccagtcccaggccccccatcaaccc
agccttcgtaatcaagtgcctccacccatcctgccctctcaggtccctccatccctgttg
aagtacccaggaagtaacagtggtttgaaccctctgtttggcccacagcaggtggccatg
ctcaaccaactctcccagctgtcacagctaaaccagatcaaccagttgcagcgtctactt
ctccagcagcagcagcagcagcaacaacaacagcagcaacagcagaaggctcagaaccag
agaggcatgcccctgggacggcaaactgaacagacgcgccctattggttcttctccatca
atgatgcagccccaacggcacctagatccctctctgctaaagcagcctttacccctcaag
ccgtacctggatagctacttgtctcacaacacctctgagatgcagaaagatgctctcgga
cccttcagcaacttccctttaagcttgaactctaacctgaatgtacccttggacatgggt
gttagtggtggagctatgagctacaaagagctgccccagtccagactgaagaaactttgg
gctactgagcctctggagcagaacagtaaacctggtgctatgtcgtctgtgctgcgtcca
gaggactctcccttctatgacttcctgtctcctggcccgtctcccctgagtcctcctggc
caatcagtgggctctgtgggcgatggctggccaccccgtgccaactcccccccatcccat
ggaaacactgtcacctggcccccagagttccgacccggggagccttggaaaggttacccc
aacattgaccctgagactgacccctatgtgacccccggcagtgtcatcaacaacctctcc
attaacaccgtccgtgacacagaccacctcagggacaggaacaacgggccatcctcatca
ctgaacaccacgatgccttctaatagtgcctggtcatccattcgtgcctccagccacagc
ggttccctcaccagtacagcacaaagcacttcagccagacccagtgagtcaaagtggtct
cccggtggcagttctgtgtccaactcctccctagcccatgagctgtggaaggtccccttg
tcaaccaaggcgttgtctggggcagccccctccaggccaccacctggcctcaccagccag
aagcccagccctgcctccaccggctgggatggctctgctctgaggtggggagggtggagc
tcctctgagtccagatacacacctggttccagttggggtgacagcagcagctcagggaga
tcccaatggcttgttctaaagaatctcacgcctcagattgacggctctaccctgaagacc
ctgtgcatgcagcacggccctctgatcacattccacctcaacctgccacatggcaacgct
gttgtatgctacagctccaaggatgaggccactaaggcccagaagagcctgcacatgtgt
gttttagggaacactactattctggctgagtttgccagcgaggaggaaatcaaccgtttc
tttgcacaagggcagtctctggccactccctcctctggctggcaggccatcggctcttct
cagagcagaatggatcagtctcactcgtttcccggccgcgcttctgaacccaaccagtgg
aacagcagtgacctccacagctcctccctgtggggcagacccaactattccagtagccta
tgggggagctccagtggcaacgaggccgggaggatcagcagcccttctccaatcagctcc
ttcctcccagtggatcacctgacggggggcggagactccatgtga
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integrated database retrieval system
