Betta splendens (Siamese fighting fish): 114860802
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Entry
114860802 CDS
T08231
Symbol
ciita
Name
(RefSeq) MHC class II transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
bspl01001
]
114860802 (ciita)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
bspl04054
]
114860802 (ciita)
Enzymes [BR:
bspl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
114860802 (ciita)
Protein kinases [BR:
bspl01001
]
Serine/threonine kinases: Other
TAF1 family
114860802 (ciita)
Pattern recognition receptors [BR:
bspl04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
114860802 (ciita)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
AAA_16
LRR_14
AAA_22
nSTAND3
nSTAND_NTPase5
nSTAND6
DUF815
NB-ARC
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
114860802
NCBI-ProteinID:
XP_029015516
UniProt:
A0A6P7N7M3
LinkDB
All DBs
Position
8:2908945..2921244
Genome browser
AA seq
1606 aa
AA seq
DB search
MWKKQTQPFLPAASLQIDLDVREVKLLQTTMVQFEEVLGCVRLALTWAAPAQIRALLEGL
VEQEIISEAYSRSLALHRLAEGICIDREPPCSPGTQDHSLENLESVFLLDESWTYGCQLT
DGYNQDEGWEAVIDEDYLSIRSTPSVCETQSSRDDEMPEVLRSADPMQKPASDSERAEEG
ISAAEREWLEQVEEAARRVAVPLWQHWDRGRTMLLPMLPSALAERQTSQRSPAGEQCCLL
KMEEETGLAAACRSLGFYTDNFRGVNADACSSLDAAETTRTPEDLCLCPDGGAALPGLDA
DPFSAFGGAGSPSPVEDGVKTSPNGLADEPEDPLPTAEELMSWSTEDGFTQVAELLSPSA
LRDTFTIATESLCSATTHHSVTSGFTETIENVFPSVFGTTRSSADALPASPDGTEHEEKL
ESHWGAKMQEEDQDTLLPTEYGDLPDDISEFMNDKYLLETDRLFEDFFNYDLDILSDLCL
SDLSSLNHQQREDNKPARNTNKRRKRQRAAPSNQGSDDITPPKPKRQRPGRSNPKEARTQ
HVVTHNTEAGPDLSPVKTPELPTPPPRIIHVSPPIQFIIPDTAGWISPQLIRLPFPRSAS
APTYILVPASPPPCKPQVPPLSPVDGAVAPVHMSSSPQGSATASKAISPPPLSPNNEISP
CKESPQSPSVLDLPQATKDYIQDSKAHVGRTCMDMEEGLSLAAHYVDRHVSQKEALRSGK
NTIKCLDKELVIMGETDRQRSLIGQSQIFDGFNGDKPKRYIFLFGNAGMGKSTLIRKLCL
DWSNDCLPQFDFVFLLDGKALTLTEAAHSLQTLLLNLSTFAAPCADADAVFAQILAAPKR
VLVIFDGFDELRDYEILLQNQEKDVMSSLQKDSRAPTFTVRQLYAAVLQRVLLPGCTLLL
SSRPKGTASQILRRADSFLEVCGFTPADVETYLSRYFTDAALRASASGCLKDCSFLRLLC
WNPGLCRLVCFVLEHSKGPEDLPRTLTGLCHQVLRLKIELDCRSTASPAGGQTQEPEQSA
EETKSQISTKAPKRSRAQLHTRSRTQKARRTKKQKDSEEAEGETEAPGSELDRKEEKELL
VQLSSLAWEGVKANSSVLPKDRTVSDQLRAFGIRMGLLLCRRLGAKTAVLNGEKEEKKEL
GGKKALTASTGSTGARDEHILLWANPFLQSYLAAARLSLSRSVSERSFLQTLPFQAGPKG
RRRPQREEHELTQRFAAGVLFHKKAELQRLHSYAEGVKDTLVNKQALVRKHLQSLSHGDL
SPAQVLEACHYVYEASFTHGGDSGDTSRLLSDLAAKLPEAQTFSGVPLNPPDVFAVQKVL
ERGGSEGRRFCLDLENSGVHVSGLRALVGLSNISTYRACIADVISLWEQLEQSGDDALLQ
GAFSKFKIHPLKATQVCHVEHLAKLVTIHRQRRLPNSSGQSHPILAEGVPAVEELHRLEY
ELDPDKGPLGLPKLWELLPGLQNLQHLDLENGNIGDKGAEQLADALASHSSLEILNLSQN
SIGDHGVKKLASTLKDLPKLHCLSLYSNVISDQGAESLAAVLPHMSSLTVLDVLYNKLTD
VGAQVLAACLKNCKKIKHLRMWNQFIPYGVLERLHKQDSRILCEAT
NT seq
4821 nt
NT seq
+upstream
nt +downstream
nt
atgtggaaaaagcaaactcagccatttctcccagcggcttcccttcagatagaccttgat
gttcgggaggtcaagctgctccagacgaccatggtccagttcgaggaggttctgggctgc
gtgcgcctggctctgacctgggccgccccagcccagatccgagctctgctggagggtttg
gtggagcaggagatcatctcggaggcctacagcaggagcctggctctgcatcgactcgct
gaagggatctgcattgaccgcgagccaccgtgtagcccaggaactcaggaccacagcctg
gaaaacctggagtcggtatttttgctggacgagtcctggacgtatggatgccagctcact
gacggatacaaccaggacgaggggtgggaagcagtaatagatgaagactacctcagcatc
aggtccacaccgagcgtgtgtgaaacacagagcagccgcgacgatgagatgccagaagtg
ctgagaagtgcagatccaatgcagaagccagcaagtgatagtgaaagagccgaggagggg
atttcagccgctgagagggagtggttagagcaggtagaggaggcagcccggcgggtggct
gtgcctctgtggcagcactgggaccgagggcgaacgatgctgctgcctatgcttccttct
gcgctcgccgaacgccagacgagtcaacgctcacccgctggagaacaatgctgcctttta
aagatggaagaggaaacggggcttgcagcagcctgcaggtcgctgggtttctacacggac
aacttcaggggggtgaacgcagacgcctgctcctcgctggatgcagctgaaaccacccgg
acgccagaagacctgtgcttgtgtccggatggcggcgcggcgctgcccggcctggacgcg
gatcctttcagcgcctttgggggagcaggaagtccctcaccggtggaggacggcgtgaaa
acgagccccaacggcctggcagacgagccggaggaccctctccccacagcagaggagctg
atgagctggagcacagaggacggattcacgcaggtcgcagaactactttcgccttctgca
ctaagagacacttttactattgcaacagagagtttatgttctgcaaccacacaccacagc
gtgacgtcaggcttcacagaaactatagaaaatgtctttccaagtgtttttggcacaaca
cggagcagcgccgatgccctgccagcctcccctgacggcacagagcatgaggagaagctg
gagtcgcactggggtgccaagatgcaggaagaagaccaggacactttgctccctactgaa
tatggagatctgccagatgatatatctgaattcatgaatgacaaatatctgctggaaaca
gacaggctctttgaagacttttttaactacgacctcgacatcctcagtgatctgtgtctg
tcagacttgtccagtttgaatcaccagcagcgggaggacaacaaaccagcacgcaacaca
aacaaaaggcggaagagacaaagagctgctccgtcaaatcagggcagcgatgacatcaca
ccaccaaaacccaaaaggcagcgaccaggtcgatcaaaccccaaagaggcacggactcaa
catgttgtgacacacaacactgaagcaggaccagacctgagtccggtcaaaacgccagaa
ctccccacgcctccgcccagaatcatacacgtgtctccgcccatccagttcatcatccca
gacacggcgggctggatctcaccacaactgatcagactcccattcccacgatccgcttct
gcacctacttacatactggttcctgcttctccacctccctgcaaaccccaggttcctcct
ctgtctccagtggacggcgctgtggcaccggtgcacatgagctcatcccctcagggatca
gccacagccagcaaagccatatctccaccgccactgtctccaaacaacgagatttccccg
tgtaaagaatcgccccagtctccctctgtcctcgatttgcctcaagctacaaaggactac
attcaggactccaaagcccatgtgggccgaacctgcatggacatggaggagggcctgagt
ctggctgctcattacgtggacaggcatgtgagccagaaagaggcccttcgctctgggaaa
aacaccatcaaatgtctggacaaggagttggtgatcatgggggaaacggatcggcagaga
agcctgatcggccagagtcagatctttgacggcttcaatggagacaaacccaaacgctac
atttttctgtttggcaacgccggcatgggaaaaagcaccctgatcaggaagctgtgcctg
gattggtccaacgactgcctcccacagtttgactttgtgttcctgctggacgggaaggcc
ctcaccttaacggaggccgcccacagccttcagacgctgctgctcaacctctccaccttc
gccgccccctgcgcggatgccgacgccgtgttcgctcagattcttgcagcccccaagcgc
gtgctcgtcattttcgacgggttcgatgagctgcgggactatgagattctactgcagaac
caggagaaggacgtgatgagctcactgcagaaggacagcagggccccgaccttcaccgta
cggcagctgtacgccgccgttcttcagagggtccttcttccaggctgcacgctcctactc
tcctcgcgcccaaaaggcaccgccagccagatactgcgacgggcagacagcttcctggag
gtgtgtggcttcacgcccgccgacgtggagacgtatctgtcgcggtacttcactgacgca
gccctcagagcctctgcttcgggctgcttgaaagactgcagcttcctgcgcctcctctgt
tggaacccggggctgtgtcgcttggtgtgctttgttttagaacactccaaaggtcccgag
gacctgccgagaactttaaccggcctgtgccatcaagtgctccgtctaaagatagaactg
gactgcagaagcacagcctcccctgcaggaggtcagactcaggaaccagaacaatctgct
gaggaaactaagagtcaaatctccaccaaagcgcctaaaaggtccagagcccaacttcac
acacggtctcgcacccaaaaagcaagaaggacaaaaaagcagaaggacagtgaggaggct
gaaggagagacagaggctcctggaagtgagctggacagaaaggaggagaaggagctgctt
gtgcagctgagctcgttggcgtgggagggggtcaaggccaactcttccgtcctccccaaa
gaccggaccgtgtcggaccaactcagggcctttggcatcaggatggggctcctcctctgt
cgccgcctcggggcaaaaacagctgtgttgaacggtgagaaggaggaaaaaaaggaacta
ggaggcaagaaagcattaacagcatcaacaggaagcaccggcgccagagacgagcacatt
ttgctgtgggccaaccccttccttcagagctacctggcagcggctcggctgtcgttgtca
aggtccgtgtcggagcgcagcttcctccagacgctgcctttccaggcaggtccgaaggga
cgccggcggcctcagcgggaggagcacgagctcacgcagcgcttcgccgccggcgtcctg
tttcacaagaaagcggagctgcagcggctgcactcctacgccgagggcgtcaaagacacg
ctggtcaacaagcaggctctggtaagaaaacacctgcagagtctgtcccacggggacctg
agcccggcgcaggtcctggaggcgtgccactacgtgtacgaggccagtttcacgcacggc
ggcgacagcggggacacctcgcggctgctcagcgacctggcagccaagctgcccgaggcc
cagaccttctccggggttccgctcaacccgccggacgtgttcgctgtgcagaaagttctc
gagagaggaggaagtgagggcagacgtttctgcctggatctggagaattctggggtccat
gtttctggactcagagctctggtggggctcagcaacatcagcacatacagggcctgcatc
gctgacgtcatcagcctgtgggagcagctggagcagagcggcgacgacgcgctccttcaa
ggggccttctccaaattcaagatccacccgctgaaggccacgcaggtctgccacgtggag
cacctggccaagctggtcaccatacacagacagaggaggctgccgaacagctccggccaa
tcacatcccatcctagcggagggagtcccagccgtggaggagctgcatagactggagtat
gagctggatccagataaaggtcctcttggtttaccaaagctgtgggagctcctgccaggt
ctgcagaacctccagcacctagatctagagaacggtaatataggcgacaaaggggcagaa
cagctggctgatgctttagcctcacattcctccctggagatactcaatctgtcacaaaat
agcataggagaccatggggtgaagaaattggcatctacactaaaggacctgcccaaactg
cactgtttgagcctttacagtaacgtgatttctgaccaaggagcggagagtctcgctgct
gtcctcccacacatgtcttctctcacagtgttggatgtgctgtacaacaagctgacggat
gtcggagctcaggtcctcgcagcctgtcttaaaaactgtaaaaaaattaagcatttgaga
atgtggaaccagttcatcccttacggagtgcttgagaggctccacaagcaggacagccgc
attctttgcgaagccacatga
DBGET
integrated database retrieval system
