Betta splendens (Siamese fighting fish): 114860806
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Entry
114860806 CDS
T08231
Symbol
taf5l
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
114860806 (taf5l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bspl03021
]
114860806 (taf5l)
03036 Chromosome and associated proteins [BR:
bspl03036
]
114860806 (taf5l)
Transcription machinery [BR:
bspl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
114860806 (taf5l)
Coactivators
SAGA/TFTC/STAGA complex
114860806 (taf5l)
Chromosome and associated proteins [BR:
bspl03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
114860806 (taf5l)
STAGA complex
114860806 (taf5l)
TFTC complex
114860806 (taf5l)
SAGA complex
114860806 (taf5l)
SLIK complex
114860806 (taf5l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
TFIID_NTD2
EIF3I
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
NBCH_WD40
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_IFT140_1st
RMC1_N
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_Vps41
Beta-prop_DCAF4
Beta-prop_WDR19_1st
PROPPIN
Nbas_N
PEP5_VPS11_N
Beta-prop_IP5PC_F
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
114860806
NCBI-ProteinID:
XP_029015538
UniProt:
A0A6P7NB59
LinkDB
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Position
1:complement(1284926..1288380)
Genome browser
AA seq
600 aa
AA seq
DB search
MKRVRTEQIQYAVAQYLKRRQYVDTDGSLKGAKLFQSAEEMAASLTVQAESGVANIVSAA
PCQSDPQQYETQFSRLRCFLAEAEISWAKEVSSILYPLFVYLHLDMVRCGLKGAVDGFYS
RFHGAFLQDSEQRAVIEQLRHVLTAQDVASNPKLSAFLQHKYVVQLTEPAYSYLLRYLQS
EDNGTLCRALSTHLQLEVTTSRRTDYQLYGAAFGATTAQNSTSSWAGVDGADGGEGVEVP
AGIPQNEAALEALQDSIKKVREGPPSLTTVCFYAFHHTEQMLNTAEVSADSRLLSAGFDS
STVKLWSLRARKLKARPHQSDVSHIHLACDVLEEDGEEEDSSGSEIKTLRGHSGPVFRTA
FLTDSSGLLSCSEDTTVRYWDLGSFTNTALYRGHAYPVWDVDVSPCSLYFASGSHDRTAR
LWTFSRAYPLRVYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWGTQQGASVRLFTGHRG
PVLSLAFSPNGKYLASAGEDQRVKLWDLASGTLFKDLRGHTDSVTSLSFSPDSSLVASSS
MDNSVRVWDIRSSHSGTPADGSSSELVGLYTGNTSNVLNVQFMACNLLLVTGTAQEKSEQ
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgggttcgcactgagcagatccaatatgctgtggctcagtacctgaagaggagg
cagtatgtggacaccgacggctccctgaaaggagccaagctgttccagtctgctgaggag
atggccgccagcctcacggtgcaggcagagtcgggcgttgccaacatcgtctctgctgca
ccctgtcagtctgatccacagcagtatgagactcagttctccagactgcgctgctttctt
gcagaagctgaaatctcttgggcaaaggaggtgagcagcatcctgtatccactcttcgtt
tacctgcacctggacatggtgcgctgcggcctgaagggggcagtcgatgggttttacagt
cgtttccacggggcctttcttcaggacagtgagcagcgggccgtcatagagcagctccgt
catgttctgactgctcaggatgttgcatctaaccccaagctgagtgctttcctgcagcac
aagtacgtggttcagctgacggagccggcctacagctacctgctgcgctacctgcagagc
gaggacaacggcaccctctgcagggctctgagcactcacctgcaactggaggtcaccacc
tcgaggcgtacggactaccagctctatggagctgcttttggggcaaccaccgcccaaaac
tccacatcgtcctgggcaggagtggatggagcagatggtggagagggggtggaggtccct
gcagggatcccacagaacgaggcagctctggaggctttgcaagattccatcaagaaagtc
cgtgagggtcccccctcactcactactgtgtgcttttatgccttccaccacacggagcag
atgctgaacacggccgaggtgtctgcggacagccggctgctgtctgctggctttgacagc
tccacagtgaagctatggagccttcgagccagaaagttgaaggccagaccgcatcagtct
gacgtatcgcacatccacctggcgtgtgacgtgctagaggaggatggggaggaagaagac
tcttctggtagtgagataaagacgctgcgaggtcacagtggcccagtgttccgtacggcc
ttcctgaccgacagctctggattgctgtcctgttccgaggacacgaccgttcgctactgg
gacctgggcagctttacgaacacggcgctctatcgcggccatgcctaccctgtgtgggac
gtggacgtcagcccctgcagcttatacttcgccagcggttcccacgaccgcaccgcccgt
ctctggaccttctcccgcgcctacccgctgcgcgtctatgcagggcacctcgcggatgtt
gactgtgtcaaattccaccccaactccaactacctggccaccggctccacggacaagacc
gtgcggttgtggggcacccagcagggggcatctgttcgtctcttcaccggccaccgtggc
ccagtgctctcgctcgctttttcccctaatgggaagtacttggcgtctgctggcgaggac
caaagggtgaagctgtgggatctagcatcagggacgctgttcaaagacctgcgggggcac
acggacagcgtgaccagtctgtctttcagcccagacagcagcctggtggcctcgtcctcc
atggacaactcggtccgcgtgtgggacatccgcagctcccacagcgggacgccagcagac
ggctcgtccagcgagctggtgggactgtacactggaaacaccagcaacgtgctcaacgtc
cagttcatggcctgcaacctgctgctggtcacaggaaccgcacaggagaaatccgaacag
tag
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integrated database retrieval system
