Betta splendens (Siamese fighting fish): 114861607
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Entry
114861607 CDS
T08231
Symbol
rfc5
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl03030
DNA replication
bspl03410
Base excision repair
bspl03420
Nucleotide excision repair
bspl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
114861607 (rfc5)
03410 Base excision repair
114861607 (rfc5)
03420 Nucleotide excision repair
114861607 (rfc5)
03430 Mismatch repair
114861607 (rfc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bspl03032
]
114861607 (rfc5)
03036 Chromosome and associated proteins [BR:
bspl03036
]
114861607 (rfc5)
03400 DNA repair and recombination proteins [BR:
bspl03400
]
114861607 (rfc5)
DNA replication proteins [BR:
bspl03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
114861607 (rfc5)
DNA Replication Termination Factors
ELG1-RFC complex
114861607 (rfc5)
Chromosome and associated proteins [BR:
bspl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
114861607 (rfc5)
DNA repair and recombination proteins [BR:
bspl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
114861607 (rfc5)
Check point factors
HRAD17(Rad24)-RFC complex
114861607 (rfc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_11
AAA_22
AAA_24
RuvB_N
AAA_assoc_2
AAA_14
AAA_16
DEAD
ResIII
DUF815
PhoH
AAA_7
TIP49
AAA_19
AAA_30
AAA_5
ATPase_2
AAA_2
nSTAND3
Mg_chelatase
AAA_25
DNAX_ATPase_lid
Thioredoxin_6
DUF4119
Motif
Other DBs
NCBI-GeneID:
114861607
NCBI-ProteinID:
XP_029016870
UniProt:
A0A6P7NFI2
LinkDB
All DBs
Position
9:complement(27686452..27689444)
Genome browser
AA seq
335 aa
AA seq
DB search
MASTDKPPTQARNLPWVEKYRPQTLDDLISHKDILSTIQKFISEDKLPHLLFYGPPGTGK
TSTILACARQLYKDKEFNSMVLELNASDDRGIGVVRGPILSFASTRTIFKKGFKLVILDE
ADAMTQDAQNALRRVIEKFTENTRFCMICNYLSKIIPALQSRCTRFRFGPLSQDQMIPRL
EYVIQQESIDITQDGMKAIVTLSSGDMRRSLNILQSTSMAYGKVTEETVYTCTGHPLRSD
IANILDWSLNKDFTTAYKLILELKTLKGLALHDILTEVHLLIHRVDFPPAIRIDLLIKLA
DIEHRLASGTNEKIQLSSMVSAFQGVRDLVVSEAS
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggcttctacagataaaccgccgacacaagctagaaatttaccctgggttgaaaaatac
agaccacagacccttgatgacctgatctcacacaaagatattctgagcaccatccagaag
tttatcagtgaggacaagcttccccatctcttgttctatggtccaccaggaacaggcaaa
acctccaccatccttgcctgtgccagacagctgtacaaggacaaagagttcaactctatg
gtgttggagctaaacgcgtccgatgaccgaggtattggtgtcgtacgaggtcccattctg
agtttcgccagcaccaggacgatctttaagaagggcttcaagttggtgatactggatgag
gctgatgccatgacccaggatgcccagaatgcattgcggcgagtgattgagaagttcacg
gaaaacaccaggttctgtatgatctgcaactacctgtctaagatcatccctgccctccag
tctcgctgcaccaggtttcgtttcgggccgctgtcccaagaccagatgatccctcggcta
gagtatgtcatccaacaggagagtatcgatataactcaagatggaatgaaggccattgtg
accctttcatcaggtgacatgagaagatctctcaacatacttcagagcaccagtatggcg
tatgggaaggtcacagaggagacggtgtacacctgcactggtcaccccctccgctcagac
atagccaacatcctcgactggtccctcaacaaagacttcaccacagcatacaaactaatc
cttgagttgaagactctgaaaggtttggccctgcatgatattctcacagaggttcatctg
cttatacacagagttgactttcctccagctattcggatcgatctgctcatcaagttggct
gacatagagcaccggctcgcctcaggaaccaacgagaagatccagctaagctccatggtt
tctgctttccagggagtgagagaccttgtggtcagtgaggcctcatag
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integrated database retrieval system