Betta splendens (Siamese fighting fish): 114861820
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Entry
114861820 CDS
T08231
Name
(RefSeq) dmX-like protein 1 isoform X1
KO
K24155
rabconnectin-3a
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
114861820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bspl04131
]
114861820
Membrane trafficking [BR:
bspl04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
114861820
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
114861820
RAVE complex
114861820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_IFT140_1st
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_HPS5
Beta-prop_EML
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_Vps41
Beta-prop_DCAF12
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
114861820
NCBI-ProteinID:
XP_055367592
UniProt:
A0A9W2Y0W3
LinkDB
All DBs
Position
9:complement(24791187..24827761)
Genome browser
AA seq
3138 aa
AA seq
DB search
MNLHQVLTGAVNPGDNCFSVGSFNNVPFTAYASGCDVVILGSDFERLQIIPGAKHGNIQV
GCVDCSLRGGQIAASYGSIVCVFEPVQHPDQKDASLTKSRCQWQKTGQFVLQSMVCNLAW
HPTGTTLLTGSSSLQLWSDADGGKDEVEGGGKQRDMTISDSRSAWRCIWQSNTASPVNLM
KFSPDGEFFATAGQDDCLVKVWYSTSKWKSSVCKLFTPPEPSVIVQGELAFSFVYLAHPR
SVTGLSWRKTSKYMPRGAVCNVLLTCCKDSVCRLWAETLLPGDSLLYGHHDNYSSDQHSD
SNRCAGPTGKHTSDGKTQGKTAQDLNFQELQHYSSYRDVPQPSLTGFLPHLQNHPHFSHK
RSSTNTPHANALCHFHIAASINPATDIPLLPSISSLSAADDEETGSLFTVHWLNNKELHF
TLAMEVFLQQLRGSLEQQNEGSNEELDGEDNVDEEVNGSKASDPQELPLAAVGHQVDVLL
EEWNKGADMLFSIHPMDGSLLVWHVDWLDEYQPGMFRQTQVSFVSRIPVAFPAGDAISLS
HSVVMYACNKNVDLAIQHGRQRPPGTTLPRTKSALISYGGQGKAAPSSSLRLSIFTPNVL
MISKHDDGSLNQWAVSFAEDSAFSTVLSVSHKSRFCGHRFHLNDLACHSVLPLLLTTSHH
NALRTPEVDSILAPPEACSSGFSQSASMSRRSRASRVSLGTVSQDPNAIYSELILWRVDP
VGPLSLSGGVSELARINSLHASAFANVAWLPTLIPCSCLGAYCNSPSACFVASDGHSLRL
YQVVIEAKKLLSELSNPEISKYVGEVFNIISQQSTAKPGCIIELDAITDFQGKETQLLHV
FEEELILGSERTDTTQKTAPHNTSGEPPFSARFFLVVVELTPTGRSLLHMWHLHLVAQPI
TMEETEKDATAASPLDGSQFNFDTYSSPVIQKNKPCTSNLQSACRLSLTTHSLFSQEMAL
PEGVEAISVTPSAGHLSASCSLPSDRVPYLLATSCSDGKVRFWRCNVMATESLSMENRAY
QWEEWPLLLEEGLPNSSAVSVPGRPIEVSCCHTGRIAVAYRQTPNSLKSKSHLNSETQST
SPPTLASSPYLTPTVTVQRSPNHTLSLSAANTKAPLVHIGIFQCESTGGSQWILEQTIVL
DGTDPSADYDVSSSSGESTDITIDFSLPNDNCVGSNSKSLVHLDWVSQEDGSHVLTVGIG
TKIYMYGRLSGKPPELGLSSDAGRDQSLLRLVLLRSVDLVSSVEGSLPIPVSLSWVRDGI
LVVGMDCEMHVYSQWQPPAPPKPNVIISQETDISSSVSSIISAVRQSQEEVFNSAVPMSS
LAPPRKALTRSMMSLAQKLSGKRTAYDLPVEKEDSGLFEAAHQLFPTLPQYHPVQLLELM
DLGKVHRAKAILSHLVKCIAGEIVALKDSAANPGKRFRSRTISAGGSTARDPKMFSKSES
STPDYTEISSIPPLPLYALLAADEDTSPAPGKVDSVSGDSGHGSSHTDAYDELFHTPSIV
DVDPLDSDKEETGNKVIDLSQYSPTYFGPEHAQVLSSHLLHSSLPGLTRMEQMSLMALAD
TIATTSTDLKDNQDKSKGGETLDECGLKFLLAVRLHTFLSTSMPPAHRAQLLRQGLSTCH
YAWAFHSEAEEELLNMLPALQKGEPTWPELRSMGVGWWLRSTNKLRRCIEKVAKVSFQKS
NDPLDAAIFYLALKKKAVVWGLYRSQKNAKMTEFFHNNFTEDRWRKAALKNAFSLLGKQR
FQHSAAFFLLAGSLKDAVEVCLENLQDLQLALVITRLYESEFETASTYKKILQRHVLGQD
KQIPVNEDPFLRSMAYWVLEDYSRALDTLLEQPKNMTSSSPTEQSTASSFVSRSNPEVFN
FYIYLRTHPLLLRRHFSSSEKAKVGLTTECRRASSISLEERRLFFTAAHAHLQAGCPMLA
LEVLSKMPKVHKHSKLSKTQNASMATDLSVGSKNEQSSDPDWSQTALNGYDSDRNSLSNS
QSDSVLSFDWSQPSVTLPDEPLELKWDSDKDDEDKDDEDDEGETKNAKSDITADSTSVFQ
DTQDAASPLMETVTEEDSGESKDFIAPSDDILAAQLKFTACLKIMTNELRTLSTGYELDG
GKLRYQLYQWLEREVVALQRCCSYKPRLPELCVSGDACVSGLLEEEPGSPRGDSQKSRRH
WLQSNQPLLRMFLSYCSLHGSHGGGLASVRMELTLLLQESHQDDSFQSALTSSHQPASIP
LLMACTANVKTVVANPIVYLTNLTHDILQTINALDSPPHPDVVNNEIYVMHTLAASLSAC
IYQCLCDGQTYSHVNHFTGTVYQSVLLSQKQPVRTVSMDESVQANTSPAHWPGISTLISQ
LSSAGEDSQPGLTVLLCEILTAVFLSLFVHGMATHSCNELFRIVAHPLNSKLWVAVFGGG
AMIPVIEKPNSPTRTPPPASPSGSDRKSRRFRLLSSRSGSKEESGMEPQSLYSPRRDRTV
EQEAATIYKERFVPPELSIWDYFIAKPSLPQSENGVEYDSEESHSSQDEDDDEDGYEDVF
DPNSPQKEHSNHNSYSWCLMRLAMVQLVLVNLKSFYPMAGYDLLDLPVGSPLCHAVLKTL
QRWEQVLQKRLELFEGPPSKYISNHLQDETTTPGPALLRHKAMFEPSNTPFRSNHHSALP
VKRLWRFLVKQEDVQETFIRNIFTKKRSPNEHNNSVSVCGCMVRHWLLLDCVCVCACACA
PCCFSQSLKSVEDQTDNMKCSGMDETGNDQTESNLGSPGGKARIIHKESDIITAFAINKA
NRNCLVMASTHDIQELDVSSILATQIMTWVDDDETESKSVGGEDFLVVYTRDDFAALHGT
TPYTHSSPGTPINMPWLGGVQTGRGASVMIKRNINNVRRMTSHPTLPYYLTGAQDGSVRM
FEWGHSQQIICFRSPGNSRVTRIRFNHQGNKFGVVDADGCLSLWQTNSSGNAPKPYLTLQ
CHNKTAHDFVFVSSSSLVATAGLSTDNRNVCLWDTLVTPANSLVHAFYCHDSGATVLSVA
PRQQLLITGGRKGWISVLELSHKHQRQNFQAHDSPVKALAVDPTEDCFISGSAEGNIKVW
SVASQALLFTFPNEHARQSLFRNLGTGVMQLEVGPANHMFSCGADGTMKMRILPNRFSVV
SNNNNNYGNMKNDVKFII
NT seq
9417 nt
NT seq
+upstream
nt +downstream
nt
atgaatctccaccaggttctcacaggggctgtcaaccctggggacaattgtttctctgta
gggagcttcaacaatgtgccattcacggcttatgcatcaggctgtgacgtggtgattttg
ggcagtgactttgagagactacaaatcatcccaggggccaaacatggcaacatccaggtt
ggctgtgtcgactgctcactgcgaggtggacagatcgcagcttcctatggaagcattgtg
tgtgtctttgaacctgttcagcatccggatcaaaaagatgcatcactgactaaatcgcgc
tgccaatggcagaagactggtcaatttgtattacagtctatggtatgcaacctggcctgg
caccccacaggtaccactcttttaacaggctctagtagtctccagttgtggtctgatgct
gatggaggaaaggatgaggttgaaggaggaggaaagcaaagagacatgaccataagtgac
agtcgttctgcctggaggtgcatctggcagagcaacacagcctctcctgtcaatttaatg
aagttctctcctgatggtgaattttttgccactgccggtcaggatgactgcctagtaaag
gtatggtacagcaccagtaagtggaagtcaagtgtttgcaaactcttcacacctccagag
cccagtgtcattgtccagggagagctggccttctcctttgtttacctggctcatccccgt
tctgttacgggcttatcttggaggaaaaccagcaagtacatgccacgaggtgcggtgtgt
aatgttctgctcacctgttgcaaagacagcgtatgtcggctctgggcagagacactgttg
ccaggtgacagcctcctgtatggtcaccatgacaactattcttctgaccaacacagtgac
tcaaacagatgtgctggacctactgggaaacacactagtgatgggaagacacaaggaaaa
actgcacaggacttgaattttcaagagctgcagcactactcttcatatcgggatgttccc
cagccgtctctgaccggcttcctgccacacctccagaatcatcctcacttcagccacaag
aggagcagcaccaacacgccacatgccaacgcactctgccattttcacattgctgcaagc
atcaacccagctactgacattcctctgctgccctccatctcctctctaagtgctgcggat
gatgaggagactggaagtctttttactgtccactggctgaacaacaaagagctgcatttc
actttagccatggaagtcttcctgcagcagctcaggggtagtttggagcagcaaaatgaa
ggctctaatgaagaacttgatggcgaggataatgttgatgaagaggttaatggtagcaaa
gcaagtgacccccaggagcttcctctggcagcagtggggcaccaagtggatgtgttgcta
gaggagtggaataaaggagcagatatgttgttcagtattcatcccatggacggctcactg
ttagtctggcatgtggactggttagatgaataccagccaggaatgttcagacaaactcag
gtgtcgtttgtgtcccgtatccctgtagccttccctgcaggcgatgcaatctcactgagc
cacagtgttgtcatgtatgcctgcaacaaaaatgtggatcttgcaatccaacatggcaga
cagcgaccgcctgggaccacgctgcctcgaaccaaatcagctctaataagctacggaggt
caaggaaaagccgcccccagcagtagtctgcgacttagcattttcacccccaatgtcctt
atgatctccaaacatgacgacggctccctgaaccagtgggcagtcagttttgcggaggac
tccgctttctccactgtgctgagcgtctctcataagtcacggttctgtggccatcgtttt
cacctcaatgacctagcatgtcactctgtactccctctcctcctcaccacctcacaccac
aacgccttgaggacaccggaggtagacagcatcctggcccctccagaggcctgctcctct
ggtttctctcagtcagcttctatgagccgtaggtcacgggccagcagagtctccctgggc
actgtgtcccaggatcccaatgctatctacagtgagctgattttgtggagagtggaccct
gttggtccgttgtctttgtcagggggagtctctgagctagcacggatcaattctctccac
gcatcagcgtttgctaatgtagcctggctacccacgctcatcccctgcagctgtttaggt
gcttactgtaactctcccagtgcctgctttgtggcaagcgatggccactctcttcggctg
tatcaagtagttattgaagcaaagaaactcttgagtgagctctccaaccctgagatatca
aaatatgttggggaggttttcaacatcatcagtcagcaatccacagcaaaaccaggatgc
atcatagagctggatgccattactgactttcaggggaaggagactcaactcctgcatgtt
tttgaggaggagctgatcctcgggagtgagagaacagatacgacacagaaaacagctcct
cataatacctctggtgagccacctttctcagcacgttttttcctggtggtggttgaattg
accccaacaggccgctcgctcctgcacatgtggcatcttcatcttgttgcacaacccatc
actatggaagagacagagaaggatgcgaccgcagcatccccattagacggctctcagttt
aactttgacacatacagttctccagtaattcaaaagaataaaccctgcacgtccaatctg
cagagcgcctgtcgcctcagcctgacaacacacagcctatttagtcaagagatggcgctg
cctgaaggggtggaggccatcagtgttacaccctcagcaggtcacttgagtgcatcttgt
tcgctgccatctgaccgtgtcccttacctccttgctacttcctgttctgatggaaaagtt
cgcttctggaggtgtaatgtcatggccacagagtccttgagtatggaaaaccgggcttac
cagtgggaggaatggccgctccttttagaggaggggcttcccaacagcagtgcagtgagc
gtaccaggtcgccccattgaggtcagctgctgtcacactggacggattgctgttgcctac
aggcagactccaaactcgctgaaatccaaatctcacctgaattctgagacacagtccact
tctccccccaccctggcatcctccccctacctgacccccactgttacagtacagcgtagc
ccaaatcacactctaagcctcagtgcagccaataccaaagcgcctctggtccatattggc
atttttcagtgtgagtccacaggtggttcccagtggattttagagcagactatcgttctg
gacggcacggatccctctgccgactacgatgtcagcagtagttcaggagaaagtacagat
attacaatagatttctcgttgcctaacgacaactgtgttggttctaatagcaagagcctg
gttcatttggattgggtttcacaagaggatgggtcacatgttctgactgtgggcattggg
acaaagatttatatgtatggtcgtctatctgggaagcctccagagcttggtctgtcatct
gatgcgggtagagatcagagcttgctgcgcctggttctgcttcgatcagtagatctggtg
tcttctgttgaaggctcgctacccatccctgtgtcactttcctgggtgcgagacggcatc
ttggtagtgggcatggactgtgagatgcatgtgtactcccagtggcagccgccagcgcct
cccaaacccaatgttattatttcccaggaaacagacatcagcagcagtgtctcctcaata
atctcagctgtcagacagagccaggaggaggtttttaactctgcggtgcccatgtcttca
ctggcccctcccagaaaggctttgacgagatcaatgatgagccttgctcagaagctcagt
gggaagagaacagcttatgacctgcctgtagagaaggaagattctggtctgtttgaagca
gcgcaccaactttttccaactctccctcagtatcatcctgtacagttactcgagctaatg
gatttaggaaaggttcaccgtgctaaagccatcctctcccatctggtgaaatgcattgct
ggagaaatcgtggcacttaaagacagcgccgccaatcctgggaagcgttttcgctctcga
acaatcagcgccggaggaagcacggccagagacccaaaaatgttcagcaaatcagagtcg
tccacccctgattacacagagataagctccatcccccccttacctctgtacgcccttcta
gcagctgatgaagatacatcaccagcacctggtaaagtggacagtgtgagtggagacagt
gggcatggttccagtcacacagatgcctatgatgagctctttcatacacccagcatagtg
gatgtggaccctctggacagtgataaagaggaaactgggaacaaggttattgacctctcc
cagtacagtcctacctactttggtccagaacatgcccaggttctgtccagccaccttctc
cactccagtttacctggattaactcgtatggagcagatgtctctcatggcgctggctgac
actattgctaccacaagcacagacctcaaggacaatcaggacaagagcaaaggtggagag
acactagatgagtgcggtctcaagttcctcctggctgtcaggctgcataccttcctctct
acctccatgccgccagcacaccgagcacagctgctacggcaaggactgtcaacatgtcat
tatgcctgggccttccactctgaggctgaggaggagctgctgaacatgctgcctgctcta
caaaagggagagcccacttggcccgagttgcgctccatgggcgtgggctggtggctgcga
agcaccaacaagctgcgcaggtgtattgagaaggttgccaaggtttcctttcagaaaagc
aatgatcctctggatgctgctatattttaccttgcactaaaaaagaaggcagtggtctgg
ggattgtacaggtctcagaagaatgccaaaatgacagagttttttcacaacaacttcact
gaggaccggtggagaaaggccgcattaaaaaatgccttttctctgttgggaaaacagcgg
ttccagcattctgcagccttcttccttctagctggctccctgaaggatgctgtggaggtg
tgcttagagaacctgcaagacctacaactggcactagtgatcaccagactgtatgaatct
gagtttgagactgcatccacctacaaaaagatcctccaaagacatgttctgggccaagac
aaacagattccagtcaatgaggacccgtttctacggagcatggcttactgggtcctagag
gactacagcagagccttggacactttactggagcagcctaaaaacatgaccagctctagt
ccaactgaacaaagcaccgcttcctcttttgtgtctagatctaaccctgaggttttcaac
ttttacatctacctccgcacccacccgctcctccttcgccgccacttcagctcatcagag
aaggctaaagttggcctgaccaccgagtgccgtagggccagctccattagcctggaggaa
agaagactgtttttcacagcagcacatgcacacctgcaagccggctgccccatgctggca
ctggaagtcctctccaagatgcccaaagtccacaagcattccaaattgtccaaaacccag
aatgcaagcatggctactgaccttagtgttgggagtaagaatgaacaatcatcagatcca
gattggtcccaaacagccctgaacggctatgattccgatagaaacagcttatccaacagc
cagtcggattcagtgttaagttttgactggagccagccgtcagtgactcttccagatgag
cctctcgagctgaaatgggacagtgacaaagatgatgaagataaagatgatgaggatgat
gaaggagaaacaaaaaatgctaaaagtgatataactgcagatagcaccagcgtgttccag
gacacacaggatgccgcgtcaccgctaatggagacggtgacagaggaggacagtggggag
agcaaagacttcattgcaccgtctgatgacatattggcagcacagctgaagttcactgcc
tgcttgaagatcatgactaatgagctccggactctgtcaacaggatatgaactggatgga
ggaaagctacgttaccagctctaccagtggttagagagagaggtggtggctcttcagcgt
tgttgcagctataagcctcgcctgccggagttgtgtgtgagtggtgatgcttgtgtttct
gggttgctggaggaagagcctgggagtcctcgtggtgacagccagaagagcaggagacac
tggctgcagagcaaccagcccttactgaggatgtttctgagctactgcagcctgcatggg
tcccacggaggaggactggcttcagtgcgcatggagctcacactgctgcttcaggagtcc
caccaggacgactccttccaatcagcgctgacatccagtcatcagcctgcgtcgatccct
ctgctgatggcttgtaccgctaacgttaagacggtggtggcgaatcccattgtctacctg
accaatctaactcatgacatcttacagaccatcaatgcacttgactctcctccacatcct
gatgttgtgaacaatgagatctacgtgatgcacacgctggctgcctctttgtctgcctgt
atttatcagtgtctgtgtgacggacaaacctacagccatgtaaaccatttcactgggacc
gtgtatcagagtgtgttgctgtctcagaagcagccggtccgaacggtcagcatggatgag
tctgttcaggccaacacgtctcctgcacactggccaggtatttctactctgatttctcag
ctgagctcagcaggtgaggacagtcagccaggcctgactgtgctgctctgcgagatcctg
acagctgtcttcctcagtctgtttgttcacggcatggccactcactcctgcaatgagctg
ttccgcattgtggcccaccccctcaacagcaagctctgggtcgcagtgtttggaggaggt
gccatgatacctgtcattgagaaacccaacagcccaacaagaacacccccaccagcctca
cccagtggctcagacaggaagtccagacgattcaggctgttgtcatcacgcagcgggtcc
aaggaggaatcaggaatggagccgcagagcctttatagtcccagacgtgaccgcacagtg
gagcaagaagctgcaactatctataaagaacgatttgtccctccagagctcagcatttgg
gattactttatcgccaagccttcactgcctcaatcagaaaacggagttgaatatgattca
gaggagagtcatagcagtcaggatgaagatgatgatgaggacggatatgaagatgtgttt
gacccaaactccccacagaaagaacattcaaaccacaactcatacagttggtgtttaatg
cgtctggcaatggttcagctggtgttggtcaatctcaagtccttttacccaatggcagga
tatgatttattggatctgcctgtgggctctcctttgtgtcatgctgtgctgaaaacgctg
caacgctgggagcaggtgctgcagaaaaggctggagctttttgagggccccccctccaaa
tatatctccaaccacctccaggacgaaacgactacacctggccctgcgctgctcagacac
aaggccatgtttgaaccatccaacacccctttcaggtctaaccaccattcagcgctgcca
gtgaagcgtttgtggcggttcctggttaagcaggaagacgtgcaggagacgttcattagg
aacatctttaccaagaagcgaagccccaatgagcacaataattcagtgtctgtgtgtggt
tgcatggttcgtcactggttgctgctggattgtgtgtgtgtgtgcgcgtgcgcctgtgcc
ccgtgctgcttctcccaatcattaaagtcggttgaggaccagactgacaatatgaaatgt
tcagggatggacgagacgggaaacgatcagactgagtcaaatctgggatcccctggagga
aaagcacgcatcatccacaaggagtctgacatcatcaccgccttcgctatcaacaaggca
aatcggaattgtttagtcatggcatccacccatgatattcaagagctggatgtgtcatcc
atcttggccacacagattatgacatgggtcgatgatgatgagactgaatccaaaagtgtt
ggaggtgaggatttccttgtggtttacacccgcgatgactttgccgcgctgcatggcacc
acaccgtacactcacagcagccccggcacacccatcaacatgccgtggctgggaggagtg
cagacgggcaggggtgcctccgtgatgatcaagcgaaacatcaacaacgtgagaagaatg
acctcccatcccacgctgccgtactacctgacgggcgctcaggacgggagcgtgaggatg
ttcgagtggggtcattctcagcaaatcatctgcttcaggagtccaggcaactcgagagtc
acgcggatacggttcaatcaccaagggaacaagtttggtgtggtggatgctgacgggtgt
ctgagtctgtggcagaccaactctagtggaaatgcacccaaaccgtacctgacgctgcag
tgtcacaataagacggctcacgactttgtctttgtgagctcatcttccctcgttgccacc
gcgggcctttcgacagacaacaggaacgtgtgtttgtgggacacactcgtgactcctgca
aacagtcttgtacatgcgttctactgccatgactcaggtgctactgtgctctcagtggcc
cccaggcagcagctgcttatcacaggtggcaggaagggctggatcagtgtcctggagctt
tcccacaagcaccagcgccaaaatttccaagcccacgactcgccggtcaaagcgctggct
gtggatccgaccgaggactgcttcatcagtggctcggccgaaggcaacatcaaggtttgg
agcgtggcctcgcaggcgctcctcttcaccttccccaacgagcatgcgcgccagtcgctg
ttcaggaacctcggcacgggcgtcatgcagctggaggtgggaccggccaatcacatgttc
tcctgcggcgccgacggaaccatgaagatgaggatcctcccgaatcgcttcagcgtcgtc
agcaacaacaacaacaactacggcaacatgaagaatgatgtcaaattcatcatatag
DBGET
integrated database retrieval system
