Betta splendens (Siamese fighting fish): 114861866
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Entry
114861866 CDS
T08231
Symbol
polb
Name
(RefSeq) DNA polymerase beta
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
114861866 (polb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bspl03400
]
114861866 (polb)
Enzymes [BR:
bspl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
114861866 (polb)
DNA repair and recombination proteins [BR:
bspl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
114861866 (polb)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
114861866 (polb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
HHH_8
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_5
HHH_2
NTP_transf_2
Cdd1
DUF4806
Motif
Other DBs
NCBI-GeneID:
114861866
NCBI-ProteinID:
XP_029017366
UniProt:
A0A6P7NCM5
LinkDB
All DBs
Position
9:complement(25695868..25700417)
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AA seq
337 aa
AA seq
DB search
MSKRKAPQESLNEGITDFLVELANYEKNVNRAIHKYNAYRKAASTIAKYPNKIKSGEEAK
KLDGVGAKIAEKIDEFLQTGKLRKLEKIRNDDTSSSINFLTRVTGIGPAAARKFFEEGVK
TLEDLKKIEHKLNHHQQIGLKYFEEFEKRIPRAEMEKMEALILGELENIDNDYIGTICGS
YRRGAASSGDIDILLTHPDYTSQSQKQPRLLHAVVDHLESIGFVTDTLSKGDTKFMGVCQ
LQQSDDDDEEEYLHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRTHALEKGFTLNEYTI
RPLGVTGVAGEPLMVDSERDIFEYIQYKYREPKDRSE
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagaggaaagcaccgcaggaatcccttaacgaagggataacagactttcttgtc
gaactggccaattacgagaaaaatgttaacagggcgatacacaagtacaatgcatacagg
aaagcagcatccaccattgccaagtaccctaataagatcaaaagtggcgaagaggccaaa
aagctggatggtgttggagccaaaatagcagaaaagattgatgagtttttacaaactggc
aagctacggaaactggaaaagattcgaaatgatgacacaagctcttccattaatttcctt
actagagttactggaattggccctgctgctgctaggaagttttttgaagaaggggtgaag
acattagaagatttaaaaaagattgagcacaagctcaaccatcatcaacagattggacta
aagtactttgaagaatttgagaaaagaattccacgagctgagatggaaaaaatggaggca
cttattcttggagaattggaaaacattgataacgattatattgggacaatctgtggaagc
tacaggagaggtgctgcatcgagcggtgatattgatattttgctgacccatcctgactac
acctctcagtctcagaagcagcccaggcttctccatgctgtggttgaccacttggagtct
attgggtttgtgacggacactttgtccaaaggagacaccaagttcatgggagtttgccag
ctgcagcagagtgatgatgatgatgaggaagaatatctgcacaggcgtatcgatattagg
ttgattccaaaggaccagtactactgtggagttttgtatttcactggaagtgatatcttt
aataaaaatatgagaactcatgcactagagaagggcttcactctgaatgagtacaccata
cgaccactgggagtcactggtgtggcaggtgagcctctgatggtggatagcgagagagac
atctttgaatacatccagtacaaatatagggagccaaaggatcgcagcgagtga
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