Betta splendens (Siamese fighting fish): 114862135
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Entry
114862135 CDS
T08231
Symbol
smarca5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114862135 (smarca5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bspl03021
]
114862135 (smarca5)
03036 Chromosome and associated proteins [BR:
bspl03036
]
114862135 (smarca5)
Transcription machinery [BR:
bspl03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
114862135 (smarca5)
Chromosome and associated proteins [BR:
bspl03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
114862135 (smarca5)
RSF complex
114862135 (smarca5)
WICH complex
114862135 (smarca5)
B-WICH complex
114862135 (smarca5)
NORC complex
114862135 (smarca5)
BRF complex
114862135 (smarca5)
NuRF complex (fruit fly)
114862135 (smarca5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
DBINO
Myb_DNA-binding
AAA_14
Motif
Other DBs
NCBI-GeneID:
114862135
NCBI-ProteinID:
XP_029017962
UniProt:
A0A6P7NE84
LinkDB
All DBs
Position
1:complement(5957813..5964924)
Genome browser
AA seq
1034 aa
AA seq
DB search
MSENANCAEQREEQPELEEAGGAEEKSDSDAGKESSSDAGPDGQDASSSTSSKTKDSAPG
YEEKVQTDRTNRFEYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRPRIKKDEKQNLLSAG
DNRHRRTEQEEDEELLNESTKTTNVCTRFDDSPSYVKTGKLRDYQTRGLNWLISLYENGI
NGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLYNWMNEFKRWVPSLRAVC
LIGDRDERTALIRDVLLPGEWDVCVTSYEMLIIEKAVFKKFNWRYLVIDEAHRIKNEKSK
LSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDSWFDTNNCLGDQK
LVERLHTVLRPFLLRRIKADVEKTLLPKKEIKMYVGLSKMQREWYTKILMKDIDILNSAG
KMDKMRLLNVLMQLRKCCNHPYLFDGAEPGPPYTTDLHLVVNSGKMAVLDKLLPKMKEQG
SRVLIFSQMTRMLDILEDYCMWRNYGYCRLDGQTPHEERQISINAFNEPNSSKFIFMLST
RAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQQKQVRVFRFITENTVEERIVE
RAEMKLRLDSIVIQQGRLVDPSANKLGKDEMLSIIRHGATHVFASKESEITDDDIDAILE
KGERKTMELIEKMSSLGESSLRNFTMDTENTSVYTFEGEDYREKKKVITNWIEPPKRERK
ANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLEKEILFYRKTIGYK
VPRNPDMPNSAQVQKEEQAKIDEAESLTEEELEEKENLLQQGFTIWNKRDFNQFIKANEK
WGRDDIENIAREVEGKTPEEVMEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISIKK
ALDSKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFDKESVYDELRQCIRN
SPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEREKAEKKKRGPKSSSAQKRKSE
GTPDGRGRRKKLKL
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaaacgcaaactgcgcggaacagcgggaagagcagcccgaacttgaagaagcc
ggaggagcggaggagaaatcagactcagatgctggaaaagaatcctcctcagatgctggt
cctgatggacaagatgcatcttcctctacctcgtccaaaactaaagattctgctccaggc
tatgaggagaaagtgcaaacagaccgaaccaacagatttgagtacctgttgaagcaaaca
gagttgtttgctcatttcatacaaccagctgctcagaaaacgcccacctcacccctgaag
atgaaaccagggcgtcctcgcatcaagaaggatgagaaacagaacctattgtctgctgga
gacaaccgccatcgtcgcacagagcaagaggaagatgaagagcttttgaatgagagcacc
aagactactaatgtctgcactcgctttgatgattctccctcctatgtcaagacaggaaag
ttgagggactatcagactcgtggtctgaactggcttatctctttgtatgagaatggaatc
aatggtatccttgctgatgaaatgggtttaggtaaaactcttcagactatttccttgttg
gggtatatgaagcattacagaaacatccctggtccccacatggtgctggtgcccaagtcc
acgctctacaactggatgaatgagtttaagcgatgggtgccttctcttcgagcggtctgc
ctaattggagacagagatgagaggactgctctgatcagagatgtgctgttgccaggagag
tgggacgtgtgcgtcacatcctacgagatgctcattattgaaaaagctgtgttcaagaag
ttcaactggagatacctggttattgatgaggctcacaggatcaagaatgagaaatcaaag
ctttcagaaattgttcgagaatttaagaccaccaatcgtttgttgctgactggaacacct
ctacaaaacaacctccatgagttgtgggctctgctaaacttcctgctgcctgatgtcttc
aattcttcagaggactttgactcctggtttgacacaaacaactgcttgggcgatcagaag
ttggttgaacgtcttcacactgtgttgcgtccctttctgcttcgtcgtataaaagctgat
gtagagaaaactcttctcccaaagaaagagatcaagatgtatgtgggtctcagcaagatg
cagagagaatggtacacaaagattttgatgaaggacattgacattctgaactcagcgggt
aaaatggacaagatgcgtcttctgaacgttctcatgcagctgaggaaatgctgcaaccat
ccgtatctgttcgatggagccgagccaggtcctccttacacaactgaccttcatctggtt
gtgaacagtggcaaaatggcagttttggacaagctgctcccaaagatgaaggagcagggt
tcccgtgtgctgatttttagtcagatgaccaggatgctggacatcttggaggactattgc
atgtggagaaactatgggtactgtcgccttgatggtcagacgccacatgaagagagacag
atttctatcaacgcatttaacgagcccaacagctccaagttcatctttatgttgagcacc
agggctggtggtctaggtatcaacctggctacagctgatgttgtgatcctctacgactca
gactggaacccccaggttgacctgcaggctatggatcgagctcacagaataggtcagcag
aagcaggtgcgtgtctttcgtttcatcactgaaaacacagttgaggaaaggattgtggag
agggctgagatgaagctgcgcctggactccattgtcatccagcaaggaagacttgtggat
ccaagcgcaaacaagctgggcaaggatgagatgctttccatcattcgccacggtgccaca
cacgtgtttgcttccaaagagagtgagatcacagatgatgacatagatgcaatcttggag
aagggtgaaagaaaaactatggagctcattgagaagatgtcgtccttgggtgagagctct
ttgagaaactttaccatggatacagagaacaccagtgtgtacacatttgaaggagaggat
tacagagagaagaaaaaggtcattaccaactggatcgagccacccaagagagaaaggaaa
gccaactatgctgtggatgcctatttcagagaagccctgcgagtcagcgagcccaaagca
cccaaagctcctcgtcctcccaagcagccaaatgtgcaagactttcagttctttcctccg
cgtctctttgaacttctagaaaaagagattctattctacagaaagaccataggctacaag
gtcccccgtaatccagacatgcctaactcggctcaggtgcagaaagaggagcaggctaag
atcgatgaggcagagtctctcacagaggaggagctggaggaaaaggagaacctgctgcaa
caggggttcactatctggaacaaacgtgattttaaccagttcatcaaagccaatgaaaag
tggggacgagatgatatagagaatattgccagagaagtggaaggaaaaactccagaagaa
gtcatggaatattctgctgtattctgggagcgctgcaatgagctgcaggatattgagaag
atcatggcccagatagagaggggagaggccagaatccagaggaggattagtatcaagaaa
gcactggactcaaagattggtcgctacaaggctccctttcatcagctccgtatctcgtat
ggcactaacaaaggcaaaaactacacggaggaagaagaccgctttcttatctgcatgctt
cataaacttggcttcgacaaggagagtgtgtacgatgagctgcgtcagtgcattcgcaac
tcgcctcagttccgcttcgactggttcctcaaatccaggacggccatggagctgcagagg
cggtgtaacaccctgattacgctgatagagcgagagaacatggaactggaagaacgagaa
aaggctgagaaaaagaaacggggcccaaagagcagctcagcccagaaacggaagtcagag
ggaaccccagatggccgtggacgcaggaaaaagctcaagttgtga
DBGET
integrated database retrieval system
