Betta splendens (Siamese fighting fish): 114862339
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Entry
114862339 CDS
T08231
Symbol
pdlim5a
Name
(RefSeq) PDZ and LIM domain protein 5a isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
114862339 (pdlim5a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
bspl04990
]
114862339 (pdlim5a)
Domain-containing proteins not elsewhere classified [BR:
bspl04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
114862339 (pdlim5a)
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Gene cluster
GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
zf-C3HC4_3
LIM_FHL2-3_N
Motif
Other DBs
NCBI-GeneID:
114862339
NCBI-ProteinID:
XP_029018366
UniProt:
A0A6P7NF96
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Position
9:complement(22548617..22578020)
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AA seq
570 aa
AA seq
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MSSQYSVTLVGPAPWGFRLQGGKDFNMPLTISRLTEAGKAVKGGIAVGDLVLSIDGIATD
GMNHLEAQNKIKNCTGNLSLSLQKASSLPKPPPVAPKDDRSDILKPVALAHPPPPPPPRP
SSSTPPYCGAPRANGGSGFSDAPSHSAPAAFIPSPSSAFTPASLYATPPPPPPPPPPVSY
PSSSSSSSSSPPVLIPPQPSVYNTPINLYSAENACEVAMGQRRGLLESQGGAWPPQSNGS
PRKHVVDTDIHFYHVPTHADASRKRIMEDTEDWRPRTGTTQSRSFKILAQITGTEHAPEE
EADKAKKTNEESEEAELNSHESAVIKTMIKGPAAAPGHRPPTGLITPSFGMKGNGTAPRD
PVPTRPAPQPHPKDQDTLVQMAEHIPAGTRTPMCAHCTKVIRGPFLVAMGKSWHKEEFNC
AHCRTSLADIGFVEEQGFVYCEHCYEEFFAPTCSRCRAKILGEVINALKQTWHVYCFLCA
YCQQPIRNNTFHLEDGEPYCERDFYTLFGTGCHGCEFPIEAGDKFLEAIGHTWHDTCFVC
AVCCTSLEGQTFFSKKDKPLCKKHAHAVKI
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccagtacagcgtgaccctggtaggccccgccccctggggcttcaggctgcag
ggggggaaggacttcaacatgcccctcaccatctccaggctgaccgaagcggggaaggcg
gttaaaggcggcattgcagttggagacctggtcctgtccatcgacggcattgccactgac
ggcatgaaccacctggaggcgcagaataagatcaagaactgcactggcaacctgagcctg
agcctgcagaaggcatccagtctccccaaaccacctcctgtggcaccaaaggacgaccgg
tcagatatcttaaagccggtggctctcgctcatcctcctcctcctcctcctccccgcccc
agctcctccacccccccctactgtggagcccctagagccaatgggggcagcgggttcagc
gatgccccttcacactcagcgcctgctgccttcatcccatccccatcctccgccttcacc
ccagcctccctctacgccactcctccccctcctccccctcctcctccccctgtctcctac
ccctcctcctcctcctcctcctcctcctcgcccccggtcctcattccgcctcagccttca
gtgtataacacgcccatcaacctgtactccgctgagaacgcttgtgaggtggccatgggg
cagcggcggggcctgctggagagtcagggcggagcctggccgccgcagtccaacggatcc
ccacggaaacacgtagtggacacagacatccatttttaccacgtgcccactcacgctgat
gccagcaggaagcgcatcatggaggacacggaggactggcgcccacgcacgggcaccacc
cagtccaggtccttcaagatcctggctcagatcacgggaactgaacatgctcctgaggag
gaagccgacaaagccaagaaaacaaacgaggagagcgaggaggccgagctcaacagccac
gagtctgcagtcatcaagaccatgatcaaaggccccgcggcggctccaggtcatcggcca
ccgaccggattgatcaccccgtccttcggcatgaagggcaacggcaccgccccgagggac
cctgtccccacccgacctgcgcctcagccccaccctaaggatcaggacaccctggtccag
atggcagagcacatccctgctgggacccgcacgcccatgtgtgcacactgcaccaaggtc
atcagagggccttttctggttgcaatgggaaaatcgtggcacaaggaggagttcaactgc
gcccactgccgcacgtctctcgcagacataggcttcgtggaggagcagggcttcgtttac
tgcgagcactgttacgaggagttcttcgctccgacatgcagccgctgccgggctaagatt
ctgggggaggtgataaacgccctcaaacagacgtggcacgtctactgcttcctgtgcgcc
tactgtcagcagcccataaggaacaacacattccacctggaagacggagaaccgtactgt
gaacgagacttctacactttgttcgggaccggttgccacggctgcgagttccccatcgag
gccggagacaagttcctggaggccatcggtcacacgtggcacgacacatgcttcgtttgt
gctgtctgctgtaccagtctggaaggccagaccttcttctccaagaaagacaaacctctg
tgcaagaagcacgctcacgcagtgaagatatga
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