Betta splendens (Siamese fighting fish): 114862515
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Entry
114862515 CDS
T08231
Name
(RefSeq) CCR4-NOT transcription complex subunit 2-like isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114862515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bspl03019
]
114862515
Messenger RNA biogenesis [BR:
bspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114862515
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
114862515
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
114862515
NCBI-ProteinID:
XP_029018753
UniProt:
A0A6P7NL94
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Position
9:complement(12942844..12951006)
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AA seq
543 aa
AA seq
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MKVTRGMFGANRKKFMEGGVESDYTDDSSLYYSQQSMFPPHRNEKDMLASSSASSTGQLS
QLGASLYGPQSALGFPMRGMNSSTAPPLSRSGLNQSSSQLSSHASTPNTGTMHTPPSPSR
GILPMSSRSVLNHSQQVGGPTGQAGGMGGAGERGSSGAGRSGSMGSPSRSSPSIIGMPKQ
QQARQPFTINSMSGFGVNRNPGFSMNNALSNNIFNGTDGSENVTGLDLSDFPALADRSRR
DGGSNPTPLLNPLAGRAPYVGMVTKPSSEQSQDFSIHNEDFPALPGPNYQTKDPTSTNED
SKTNLNSSGKPTSNSDGPKFPGDKSSAPSNNNQQKKGIQVLPDGRVTNIPVGMVTDQFGM
IGLLTFIRAAETDPGMVHLALGSDLTTLGLNLNSPENLYPKFASPWASAPCRPQDIDFHV
PSEYLTNIHIRDKLAAIKLSRYGEDLLFYLYYMNGGDLLQLLAAVELFNRDWRYHKEERV
WITRAPGMEPTLKTNAYERGTYYFFDCLNWRKVAKEFHLEYDKLEERPHVPSTFNYNPAQ
QAF
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgacacgcggcatgtttggtgctaatcggaagaagtttatggagggaggggta
gagagtgactacacagatgactccagcctctactacagccaacagtctatgttccctccc
caccgaaacgaaaaagacatgctggcgtcttcctctgcttcctcaacgggtcaattatca
cagctaggagccagtttatatggcccacagagtgctttggggttccccatgcgagggatg
aacagcagcacggcgcctccgttaagtcgaagtgggctgaaccagtccagcagccagctc
tcgagtcatgcatctacacccaacaccggcaccatgcatacgcccccgtcaccgagccgg
ggaattctaccgatgagcagcaggagtgtgctgaaccacagccagcaggtgggaggtccg
acagggcaggcaggaggcatggggggagcaggagagagaggaagcagtggagcagggagg
agcggcagcatggggagtcctagccgatcgtcacccagcatcattggaatgcccaagcag
cagcaggcgcggcagcctttcactattaacagtatgtcagggtttggggtgaacaggaat
ccaggtttcagcatgaacaacgcgctctccaacaacatcttcaatggcacagatggcagt
gagaatgtgacggggttggacttgtccgattttccagcgttagcagaccggagtcggagg
gatggaggatcgaaccccactccgctgctcaacccgctggccggtcgtgctccctacgtt
ggtatggtaacgaaaccgtccagtgagcagtcgcaggacttctccatccataacgaagat
ttcccagcactcccagggccaaactaccaaacaaaagaccccaccagcaccaatgaagac
agcaaaacgaatctgaactcatcaggaaagcccacctctaactcagatggtccaaagttt
cccggggataagagctctgcaccaagcaacaacaaccagcagaagaaggggattcaggtg
cttcctgacgggcgtgtgaccaacatcccggttggcatggtaacggatcagtttggtatg
atcggcttgttgacattcatccgggcggcagagacggaccctggcatggtccacctggca
ctgggctccgatctcacaacgcttggcctcaacctcaactcacccgaaaatctttatccc
aagtttgcgtctccctgggcatcagctccatgtcgaccacaagatatagacttccacgtc
ccctcagagtatttaacaaacatccacatacgagacaagttagcagctatcaagttgtct
cggtatggtgaagatctgctgttctatctctactatatgaacgggggagacctactacaa
ctgttggctgcagtagaactctttaacagggactggcggtaccataaagaggagcgggtt
tggatcactcgagctccagggatggagcccacgctgaagaccaatgcctacgagagaggg
acctactacttcttcgactgcctcaactggaggaaggtggccaaggagtttcatctggag
tatgacaagctagaagaacgacctcatgtcccctccaccttcaactacaaccctgcccag
caggccttctga
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