Betta splendens (Siamese fighting fish): 114862571
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Entry
114862571 CDS
T08231
Symbol
trim24
Name
(RefSeq) transcription intermediary factor 1-alpha isoform X1
KO
K08881
tripartite motif-containing protein 24 [EC:
2.3.2.27
]
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
bspl01001
]
114862571 (trim24)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bspl04121
]
114862571 (trim24)
Enzymes [BR:
bspl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114862571 (trim24)
Protein kinases [BR:
bspl01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
114862571 (trim24)
Ubiquitin system [BR:
bspl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
114862571 (trim24)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_UBOX
zf-RING_5
PHD-1st_NSD
DUF5054
PML_CC
cas_Cpf1_2nd
FemAB_like
DUF7217
DUF7615
Motif
Other DBs
NCBI-GeneID:
114862571
NCBI-ProteinID:
XP_029018863
UniProt:
A0A6P7NLJ4
LinkDB
All DBs
Position
9:complement(4853036..4860778)
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AA seq
1077 aa
AA seq
DB search
MDEIAESVENDDIVIIVENEAESLPAEEERLKQQGTIGLVDTCPMCKLSFHNREPKLLPC
LHSLCKKCLPAPFRNAEQRRDLQAEVDNNKPPVGVIRCPVCRQECWEMDVLDNFFVKDSA
EVPSSTVEKTSQVCMSCDDNTEATGYCMECVEFLCVTCIVAHQRVKFTRDHTIRQKEEMS
PEAVGISTQRPVFCNIHKQEPLKLFCETCDRLTCRDCQLLKHKDHNYQFLEDAYRNHRQY
LENMTQQLQEKRKAIEDVSSCISTGLQQVEDNRKAVTNEIKKSICNLIMEINRKGKILVN
QLESLSKDHESALKKQQEDVDSLRRHLDHVISFTKWATASHSGTALLYCKRLILFQIHQL
MRSSCNPSIVPQSSIRFQSRSGFWATNVDLGSLVVERSPGRPAIPNHQAAPRADAPTAGL
SVTTPQRQSTLVQLQMHVDKLFQQPHRQPYPNWSWYQNTRLPGPTGPPPPTRPVHGGSSP
SQGPFNLPQPGRRYGSANSNPRSPTSAPSLLHNTGFPATQSLRELIHSSSFLPKPMDVLQ
GPSRYPQPLSAGAATQTSPHQRGLQELKRTEAAGTLPSITISIPKPNYALSLAPAAADKP
STLSQMPPQGRQKSPVNKPSSSDRSTGTTSWKHTSELPLTLSAKRRRRSSPGPIIVIKDE
PEDEDEVRFVQSSMGSSLPDSSTGAQSKSRPQPKVSIPIPNPTSEAKGTSKEQHPQPAAQ
KQPEKRTEPEEDPNEDWCAVCQNGGELLCCDKCPKVFHLSCHIPTLNESPSGEWFCSFCR
DPDSPEMEYDRNSKNDAVSESLPHSDRRRCERLLLRLFCNDFSTDFQQPASPSETKRYKE
LIKTPMDLSVVKRKLESKHGEFYSSTEAFVADIRLIFINCAKYYKATSEIGSAGLYLEDY
FEEQLKLVYPDRVFSGGREEQMIPPLEDEIDEEEEETVADETAPTEDNKSQSHADSLEEG
IPPIEEDLVPLKQASSLVEDEKSEPAEMGMDVVEEGTDKKVEPLAVEAAPEETIKQDPKT
PEKEAKRSPACLNETNTDVINDSLKEENLLLPLDRPADPPESREKESLADTAKEKEG
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaattgccgaaagtgttgaaaatgacgacattgtcattatcgtggaaaacgaa
gcggaaagtttgccggccgaggaggagaggctgaagcagcaaggcaccatcggactggtg
gatacatgtcccatgtgtaaactgagtttccacaacagagagcccaaactcttgccatgc
cttcactctttgtgcaagaagtgtcttcctgcccccttcagaaatgctgaacaaaggcgt
gacttgcaggctgaagtcgacaacaacaaaccaccggtgggtgtcattcgatgtccagtg
tgcagacaggagtgctgggagatggatgtgctggataatttctttgtcaaagattctgct
gaggtaccgagtagcacagtggagaagaccagccaggtgtgcatgagctgtgatgacaac
acggaagcaacaggttactgcatggagtgcgtggagtttctatgtgtgacatgtattgtt
gctcatcagagggtcaagtttacccgagatcacaccatacgccagaaggaggagatgtct
ccagaagctgtgggtatttcaacacagaggcctgtgttttgtaacatccacaagcaggag
ccactaaagttgttttgtgagacatgcgatcgactaacctgtcgagactgtcagctgctc
aagcacaaggatcacaattaccagtttttagaggatgcatacagaaaccacaggcaatac
ctggaaaacatgactcagcagttgcaggagaaaagaaaggcaattgaggatgtatccagc
tgtatcagcactggactacagcaagttgaagacaacaggaaggctgtaactaatgaaata
aagaagtcaatctgtaatttgattatggaaattaacaggaaaggaaaaattctggttaac
cagcttgagtctctgagtaaggaccacgagtcggctttgaaaaagcagcaggaagatgtc
gactctctgcgcagacatctagaccatgtcatcagctttactaaatgggccacagcaagt
cacagtggaacagccctcctgtactgtaagagactgatcctttttcagatccatcaacta
atgcgatccagctgtaacccctccatcgtcccccagagttctattcgcttccagagtcgc
tcaggattttgggccacaaatgtagatcttggttctttggtagtagaaagaagtcctgga
cgacccgccataccaaaccaccaagcagctcccagagccgatgcacctacagcaggtctg
tctgtcacaactccgcagcggcagagcacattggtgcagctccagatgcatgttgacaag
cttttccaacagccccacagacagccttatcccaactggtcctggtaccaaaataccaga
ctccccggacccactggccctccacccccaaccagacctgtgcatggagggtcctccccc
tcccagggcccctttaacctgccacagcctggacgtaggtatgggagcgcaaattcaaat
cctagaagccctacatcagcgccgtccctgcttcacaacacaggattccctgctactcag
tctctgagagaactgatccatagctccagttttcttcctaaacccatggatgtgttgcag
ggaccatctcgctacccacagcctttgtctgctggagcagctacacagacatcaccccat
cagcgtggcctacaggagctgaagagaactgaagctgcaggaaccctgccttccatcact
atctctattcccaagcccaactatgctctaagtctcgccccagcagctgcagacaaacca
agcacactcagtcaaatgccacctcaaggaagacaaaagtccccggtgaacaaaccatct
tcttcagacagaagcacagggacgacttcctggaagcacacttctgagttgccgctcacc
ctttcagccaagcggcgaagacgatcgtccccgggccccatcattgtcattaaggacgag
ccagaggatgaggacgaagttcgatttgtgcagtcaagtatgggatccagcctgccagac
agcagcactggagctcagtccaaatcccgaccgcaaccgaaggtgtccattcctatccca
aatcctacatcagaggccaaaggtacatccaaagagcagcatcctcagcctgcagcacag
aagcagccagaaaagcgaacagagcccgaggaagatcccaacgaggactggtgcgctgtc
tgtcagaatggaggggagctgctctgttgtgacaaatgtcccaaagtgtttcatctatcc
tgccacatccccactctgaatgagtctcccagtggcgagtggttctgttccttctgccga
gaccctgactctcctgagatggagtacgaccgcaacagtaaaaatgacgcagtctctgag
agccttccgcacagtgatagacggaggtgtgagaggcttctcctgcgtctgttctgcaat
gacttcagtactgacttccagcagccggcatctccatcggagacaaaacggtacaaagag
ctgatcaagaccccgatggatttatcagtagtaaagaggaaactggaatcaaaacatggt
gaattttactctagtactgaggcatttgtcgcagacatcagactcatatttatcaactgt
gcaaagtactacaaggcgacctcagaaattgggagtgctggcttgtacttggaggactac
tttgaggagcagttaaagcttgtctacccagacagggttttctctggaggaagggaagag
cagatgatccctcccttagaggatgagatcgatgaagaggaagaagagacggtggcggat
gagactgctcccactgaggacaataaatcgcagagccatgcagattccctggaggaagga
atcccccctattgaagaggacttggttccgttgaaacaggcgtcctctctggtggaggac
gagaagtcagaaccagcggagatggggatggatgtagttgaagagggcacagacaaaaaa
gtagaacctttggcggttgaagcagctcctgaagaaactataaagcaagatccaaaaaca
cctgagaaagaggcaaaaagatcacctgcatgcttaaatgaaacaaacactgatgtcatc
aatgactccctgaaggaggaaaaccttctgcttcctttagacaggcctgcagatccccct
gaatccagggagaaagagtctttggcagatacagccaaagagaaggagggctag
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