Betta splendens (Siamese fighting fish): 114862612
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Entry
114862612 CDS
T08231
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bspl03019
]
114862612
03041 Spliceosome [BR:
bspl03041
]
114862612
Messenger RNA biogenesis [BR:
bspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
114862612
Spliceosome [BR:
bspl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
114862612
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Calcipressin
RRM_Nup35
Nup35_RRM_2
RRM_3
Motif
Other DBs
NCBI-GeneID:
114862612
NCBI-ProteinID:
XP_029018946
UniProt:
A0A6P7NGM8
LinkDB
All DBs
Position
9:14185775..14192757
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AA seq
387 aa
AA seq
DB search
MMEDDQPRTLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGNDPYCFVEFYDHRHA
AASLAAMNGRKIMGKEVKVNWATTPTSQKKDTSNHFHVFVGDLSPEITTEDVKAAFGPFG
RISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPK
TTYENNSKHLSFDEVVSQSSPSNCTVYCGGVSTGLTEQLMRQTFSPFGQILEIRVFPDKG
YSFVRFNTHESAAHAIVSVNGTSIEGHIVKCYWGKETPDMMNPMQQMPMPQQNKMGFAAA
QPYGQWGQWYGNGPQISQYVPNGWQVPTYGVYGQAWNQQGFNHLPASAGWTGMSTISNGG
VMEPTQGLNGSMLANQPGMGAAGYPTH
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggacgatcaacccagaaccttgtatgtggggaatctgtccagggatgtcact
gaacccctcatcctgcaagtcttcacacagataggaccctgcaagagctgtaaaatgata
gttgatacggctggaaatgatccttactgctttgtggagttttatgaccacaggcatgct
gctgcctctctggcagccatgaatggaaggaaaataatgggtaaggaggtcaaggtcaac
tgggccacgacaccaaccagtcagaaaaaagacacaagtaatcattttcatgtctttgtt
ggagacctcagtccagaaataactacagaagacgtcaaagctgcctttggtccatttggc
aggatatcagatgctcgtgttgtgaaagatatggctacagggaaatctaaaggctatggc
tttgtgtctttcttcaacaaatgggatgcagagaatgccattcagcagatggggggtcag
tggttaggaggcagacagattcgaactaactgggctacgagaaaaccccctgctccaaag
accacctatgaaaataactccaagcacctttcctttgatgaggttgtgagccagtccagt
cctagtaactgcactgtgtattgtggtggagtcagcacaggcctgacggaacaactgatg
agacagaccttctctccttttggacaaatcttggagatcagggttttcccagacaaaggt
tattcttttgtgaggttcaacacccatgagtcagcagcccatgccattgtgtcggtgaat
ggtacttcaatagagggccacatagtcaaatgttactggggtaaagagactccagacatg
atgaacccaatgcaacaaatgccaatgccccagcaaaacaagatgggcttcgctgcagcc
cagccctacggccagtggggtcagtggtacggcaacgggccccagattagccagtatgtc
ccgaatggttggcaggtccccacatacggcgtctatggccaggcttggaaccaacagggc
ttcaatcacttaccggccagtgctgggtggactggcatgagcaccatcagtaacggtggg
gttatggagcctacacagggattgaatgggagtatgctagccaaccagcctggtatggga
gctgcaggataccccacacactga
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