Betta splendens (Siamese fighting fish): 114862687
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Entry
114862687 CDS
T08231
Symbol
zgc:152968
Name
(RefSeq) RNA exonuclease 1 homolog isoform X3
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
114862687 (zgc:152968)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bspl03009
]
114862687 (zgc:152968)
Ribosome biogenesis [BR:
bspl03009
]
Eukaryotic type
Pre-60S particles
RNases
114862687 (zgc:152968)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
Zwint
KIX_2
Motif
Other DBs
NCBI-GeneID:
114862687
NCBI-ProteinID:
XP_029019104
UniProt:
A0A6P7NNG8
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All DBs
Position
9:27005671..27019151
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AA seq
1154 aa
AA seq
DB search
MFPSSGIFSSIECPVLKHGLCERPHCFYKHATELRDTSGTSYKASVVDASGVQDGYLHTI
CGTTVDGETRDDCLQELERINKEIETVRHEVEQEQRRLSHYQTVQTGSNVTAQNTSASKF
VTGSNPVDKEACQLPICTDLTKCSSKARKYVVDHSKPRTDLEYDPLSNFSAVLRSCGSSN
RNKKHTNKDQGLKRAKNPVLCNSKMQQAHQIPLSKSPYLEQIEDSNEDDVLIIDIPPSPE
KKRCRVQELADCFDAFQNIEEELAVYRESVLLDSSLLSTSSADACKVTSASSIVRNKDLS
DSSENTKLRVGSVTECLEDPEAVHHRVDFQDTVAEFKNSCEPVNLSAATEDLWNIVEVKD
NANCELPPSVKKMDALQSCAYSQTNSLFCNPPLFNAVSPSRQHIKQTGIQELIQNGIDNH
CSPKKMMPLLELDSQKPLRKMPGHIQDKSDSNQTSGAQYKETELSASSLMNKITKSEPSQ
QLLVKACNKAESSSEADFNYSDVELSDSDPMEECYRIFMEANDEGNVKSDASVEGMDLNK
SEIDVKTQSLPVKKRVAHEAKHAETVVKSRPQPQVLIPLRVPETSGFTSNTCQIQQRASM
LTASLKGSQTFVSSTCQRKPETQNARFSSTQVSENQQSAHLQNAYMNYIPLGTTVINMGN
NLHLILPEGAFPVPVASTSSPVTPVLTPISQVHTSTLAVKQAYFPPAVATVQRFRTAAPV
LIPVPAREPAFVPAQSSASVLTAPQPTAAKPVVKRKLKQQCDAAKEKVPHDVRQRYVNMF
TKEFIKTTVNVNDAFEKALAEEKAVYNRSVNKLKYLSVAVNALKKLKNQSAVAPKDKAQV
NIQNCKGNIPFNLETSKDADDAAFYESLTDYILTEEKLIEGNYPVQHPEKPGCATLFAET
KKGTTDPLKRICCRCGATYSVNRMGKHIRKEECNYHYGKGVENRVPGGVETRYSCCQGVM
GAPGCQVFKLHVHDSLSLDGFVSTIPRHPTCPGVYSLDCEMCYTVHGLELSRVTVVNSNL
QVIYDTFVRPDDVIDYNTRFSGISEEDVKGNHTPLREVQQTLLSFISADTILIGHSLETD
LCALKLLHGKVVDTSVVFPHRLGPPHKLTLNHLTAEYLRRIIQESVCGHDTAEDAAACME
LMLWKVKEDGKFKR
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgtttccttcgtccggtatattttcttccatagagtgtcctgtcctaaaacatgggctt
tgcgagcggcctcactgtttttacaaacatgctacagaactacgggatacgtctggaaca
tcgtacaaagcatccgtagttgacgcatcaggagtccaagatggttatctgcatactatc
tgtggaacaactgtggatggcgagacaagggatgattgcctccaggagttggaacggatc
aacaaggagattgaaactgtaagacatgaggtagagcaggaacaaagacggctgtctcat
tatcagacagtacagacaggaagcaatgttactgcacaaaacacgtctgcatcaaagttt
gttactggaagtaaccctgtagataaagaagcctgccaattgcctatatgtacagacttg
actaaatgttcctccaaagcaaggaagtacgttgttgaccactcaaaaccaaggactgat
ttggagtatgaccctttgtccaacttttctgctgtcctgcggtcttgcggctcatcaaat
aggaacaaaaaacacactaataaagatcaaggtttaaaaagggcaaaaaatcctgttctc
tgtaactcaaagatgcaacaagcgcatcagattccgctctccaaatcaccatatttagag
caaattgaagactctaatgaagacgatgtcctaattattgacatccctccctcaccggaa
aaaaagagatgcagagttcaagaacttgctgattgttttgatgcgttccagaatattgaa
gaggagttggctgtttacagagagtctgttttattagattcctctctgctgtccacttca
agtgctgatgcgtgtaaagtcacatctgcatcaagcatcgtaagaaacaaagatctgtct
gattcttctgagaacacaaaattacgtgttggaagtgtaactgaatgcttggaagaccca
gaagctgtacatcatagagttgattttcaggatactgttgcagaatttaagaatagttgt
gaacctgtaaatctttctgcagccacagaagatctttggaatattgttgaagttaaagac
aacgctaactgtgagctgcccccaagtgttaaaaaaatggatgcactgcaatcatgtgcc
tattcacagaccaattcacttttttgtaatcctccactttttaatgccgtctcaccgtcc
aggcagcacatcaagcaaactggaattcaggagctcattcaaaatggaattgataatcac
tgttctcccaagaaaatgatgcccttgttggaactggatagtcagaaaccattacgcaaa
atgccagggcatatacaggataaatcggacagtaaccaaacttcaggcgcacaatacaaa
gaaacagaactctctgcaagctcattgatgaataagattaccaagtctgaacccagtcag
cagcttttggttaaggcgtgtaacaaggctgagtccagctctgaggcagatttcaactac
tctgatgtggagctgtccgacagtgacccaatggaggaatgctacaggatcttcatggag
gcaaatgatgagggaaatgtaaagtctgacgcttctgttgaaggtatggatttgaataaa
tcggaaattgatgtcaaaacgcagtctcttcctgtaaagaagagagtggctcatgaagcc
aaacatgcagagactgtggttaagagtagacctcagccccaggttttgatacccctgcgt
gtaccagaaacgtcgggatttacctcaaatacctgccaaatccagcaaagagcctcaatg
ttgactgcatcactcaaaggtagtcaaacatttgtttcctctacctgtcagaggaaacct
gaaacccagaatgcacgtttttcctccacccaagtctcagaaaaccagcagtctgctcac
ttacaaaatgcttacatgaactacatacctctaggtactactgtgattaacatgggcaac
aacctgcatttgatcctcccagagggcgctttccccgtgcctgttgcttccacttccagc
ccagttaccccagtgcttactcccattagtcaagtgcatacaagcactcttgctgtgaag
caagcatattttccacctgcagttgctactgtgcagagatttcgcacggctgcacctgtg
cttattcctgttccagcacgtgagccagcttttgttccggcacagtcgagtgcatcggtc
ttaactgctcctcagcctactgctgctaagccagtggtgaaacgtaaactgaagcagcag
tgtgacgctgccaaagagaaggtgccccatgatgtccgacagcgttatgtcaacatgttc
acaaaggagttcataaaaacaacagttaatgtgaatgatgcatttgaaaaggcccttgca
gaagagaaggctgtttacaaccgcagcgtgaacaaacttaaatatctgagtgttgcagtg
aatgcactgaagaagctgaaaaaccagagtgccgttgctcccaaagataaagctcaagtc
aacatacaaaactgtaaaggcaacataccatttaacctggagacttctaaagatgcagat
gatgctgcattttatgagagcttgacagattatattttgactgaggaaaagctgattgaa
ggcaactatcctgtccagcatcctgagaaacctggttgtgcaaccctctttgcagagacc
aagaaaggcactacagatcccctgaaaagaatctgctgccgctgtggagctacttactct
gtgaaccgaatggggaaacacattcgcaaggaggagtgcaactatcactatggcaaagga
gttgaaaatagagtgccaggtggtgtagagacgcgctacagctgctgtcagggagtcatg
ggagcaccaggctgtcaggtgtttaagcttcatgtccatgattcacttagtctggatggg
tttgtgtcaactattcccagacatcccacctgtcctggagtctactctttggattgtgaa
atgtgttacaccgttcacggtctggagctgtctagagtgacggtggtcaactctaatttg
caagtaatctatgacacctttgtcagacctgatgatgtaatagactacaacaccagattt
tcaggcatcagtgaggaagatgtgaagggtaaccacacccccctcagagaggtacaacag
accttgctgagcttcattagcgcagacactattctgattggacacagcctggaaacagac
ctctgtgccctgaagttgctacatgggaaggtggtggacacatcagttgtcttcccacac
cgcttgggcccccctcacaagctgaccctcaaccacctcactgctgaatacctccgtaga
atcattcaagagagtgtttgtggccacgacactgcagaagatgctgctgcctgcatggag
cttatgttatggaaggttaaagaagatggaaaatttaaaagatga
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