Betta splendens (Siamese fighting fish): 114862757
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Entry
114862757 CDS
T08231
Symbol
utp20
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bspl03009
]
114862757 (utp20)
Ribosome biogenesis [BR:
bspl03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
114862757 (utp20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
Phage_portal_2
Motif
Other DBs
NCBI-GeneID:
114862757
NCBI-ProteinID:
XP_029019229
UniProt:
A0A6P7NNY6
LinkDB
All DBs
Position
9:complement(4586738..4602186)
Genome browser
AA seq
2822 aa
AA seq
DB search
MKLKSKSSHHKSENKYRFLTFSERLSNVKIDVIHRIDRTGSYAEEVETYFSEGLRKWRQL
NLTEHFTAFWKEVSNMCHSFNMLVFHQKSIVESLKTHLAVPNSLAYQPLLDLVVQLARDL
QTDFYPHFPDFFVLITGLLDTRDTEVLEWVFTCLSYLYKYLWRIMVKDMNNIYSLYSTLM
AHKKEHIRNFAAESFAFLMRKVPDLDALLTLMFLDLQQNPNKTQGAGQLLFEMCKGVRHM
FHSCAATALPVALHKLGPTTSPGVCLPWDTVRDALDHMAQAAASHVDIEHFLVLWESLQA
NVVELLDKIEANEEEAAQATDQLERLLYIFHTLVSHRDGAKVTNPEAVCQTVLRLIQSSA
LSSSCSRLLLQITSSLLLGENITLPKSLIQEAVQKVFASQVGEALIVEFTKEMFTMQQFE
QLFLPSLLHFTAGLFGCGDIASRNYGLDLLVSLILAKAPPPTDGSMAFETYPLLFTGHAA
GGEKSDQANGTAPEQLAVPELVLSLIRSCEQQSQCITDLSLPWAALTLLPHLRPLTPASV
VPVVTTFLNRLLCEIDSEKLGKAGLFVARQALSCLLSLDSSAQLLSLVTVDKITSVLRRF
PTDLSALLLGDLYYTRLSLSGVSQHLSHSALLELFQILHANLSSNISKIRLLTLRILSQF
EADLPPQPAAEDNADVQPVFAVCLQAELVPASVHDYREKLLHLRKLRHDLVQRCLPQGPP
GTFQQVPLRYLIAMLFINFRPLWDSVIELLVSHARGMDNKDFWGVYHDHLDMVAGQAEKE
LQSDCEDDGLSEEEDEINHQSEPGCDVIESGDVGALFLEQLTRTCRPDDRTDFPNFRSLL
WRAMTQFPDRVEPRSRELSPLLLRFIRNEFYSADLLVAPTQDLRKRSDAALRESETTVEE
EEGEEEEEEEEEEENIQQRKGPSRKTAAKQLIAHLKVFAQFSNPRALYLESSLSELYNQF
LCHQDQQIQRAALECVLTYKDPSIAPYKENLEKLLDDKHFKEEIVHFNISEETGVVEASH
RERLIPLLMRILFGRLRSRSGSKFQGKSSTASRSSIILRFLAGCQPEELGMFIDLLLEPL
RHHSQGSCLAAVERAVAETDVAAVLPLGRQQNLLDIINVLIHKVGHLIHMYLPKVLQILL
CVVASVSTILDKREQLRAGCISPLKNLRRLGLLRVQDFFECFDTYSFTPDELDAVFAAVV
WPQVCRLPTESPYSPTPLLKLIHVWCKNARYYPLLAKQKPNHPEYDILLNVFALLFAKNA
SPITINVVMDIAETLATAEDFVASETETELTVNDCVFSKPEEGSLIAADSLTLGSKVLLP
HVSTVLRYLSGIVSNTARLRKKKFRAQVSKELNILSKISRFVSDKEQSSVLVSLLVPYLQ
KGNNPQETVLDILATVQNLLRQCVQPSMFLQPLSKLFSVIHEKLTRKALTSAFQTLSDFE
PSLTYITDVAAKLNAFDSRHLDEVYFDVRLTAFQDASRRIREMQTLDLDYIRTVVHICFH
TYEIGDMSLADNATLCLSAVITQIAAIGAGERTYKDIIQHTILDAVRKGLRRKTESVQHE
YTSVLACLVKTFPSRKDFRDLVQLTNYSDPESDFFEHMKHIQIHRRGRALRKLAKQLTDG
TVAMTSRSLQQYIMPYALTALTDEKMLKHENLITASVEMVGAVCRKLTWSRYMYYLKQVI
HLLQTAQVEQKLAVSLLVTVLEAFHFDYETLSREMEAAKAREAGTATVDVGDEEQAEADE
SDASDDEEPMEIDNKADLSAVPMETDNNGEKESGVVEKTATAAATGPAAPKPPPVASGLP
QSEKELESLIATIQQTVTNNVLPRLHKCLTAKIKRDDEHKTVKSKGVKNEEVARIPIAFA
MVKLMQTLPPNVMEANLPGILIKVCVLLKNRFQEIRDVARVTLVKILETLGCRYLQYLLK
EMQSILMKGYQIHVLTFTVHQLLLVLSSTLKSGDLDPCMNMLISIFNNELFGAVAEEKEV
KGIVSKLMEARHSKSMDSYELLARFCSKESITTLILPLKEILETSSSLKVCNRVGAVLRR
VVLGLLVNEGMTFKDFLLLSHGLISQSLPLLTKRDREKGSAQPPPDPRLPPPSCLLLPPT
PKRGIQKAPVSSRTNMHILVDAGLKLLHMSLKNIKVTLSEASALEMLDPFVLLLLDCIDS
MHVRVITEALVAFIWLLKFPLPAIQQNASTLTKQLFVLLKDYSKAGAARGENYVLVQNCF
KCITKVLAKKIQGNNITETQLQVLLGYAEEDIYDHSRQATAFGLLKAILSRKLIVPEMEE
VMKKVAQLSVNGNNVMIRNNCRQIYVKYLLDYPLGMKLRDHLDFVVAQLQYEHSTGRESV
LEMLAYVFQTFPKKLLSQYSGLFFAPLALVVVNDDSPRCKKMATMAIKALLAHLDLNNQN
TLFALVSTWLKSEKTSLRRLGAQVCGLFVEVEEENFARRLDELLPLLEKELNPDNYEDIE
EEKHEREADQLLFSYLTLITKLSQHCGFLELNKPQDTLISIWGHIEAHLQFPHCWVWLTA
SQLFGQLFAAQQAEQLLSTWRGDGKDASAPSVASAFLTRNLDKKMRELALTFYSQLHSKF
LDTASGEQVIKNLLFIGKVIHLISPESDATEEAMREEEEEKEEEHQENGDEGQEVEDEGK
YVEEEENGKDDRPPTLMWLIKKMSLMAKKEASNTPKVPIKRTCVFKFLGAIAMDLGRDKL
GPYLTTIIAPLYRELDSTYADQDPTLKNLAQELIELLKKQVGLESFSLAFTAVQKEFSQR
RAARKRYKAQQAVANPEMAVKKKLKKHKNKIEAKKRKIEFHRPGYKAKKRRRHALKDLAM
VE
NT seq
8469 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaaatcaaagtcgtcacatcacaaatctgagaacaagtacaggtttctcact
ttttcggaaagactttccaatgtcaagattgatgttattcatcgtattgacaggactgga
tcttacgctgaggaagtagaaacatacttctctgaaggtctgagaaaatggaggcaactc
aacttgacagagcacttcactgccttttggaaagaagtgtccaacatgtgccattcattc
aacatgctggtcttccatcagaagtccatagtggagagtttgaaaacacacctggctgtt
cccaacagtctggcctaccagccactcctggacctggtggtgcagctggcgagagaccta
cagacagacttctaccctcacttccctgacttctttgttctgatcaccggactgctggac
accagggacacagaggtcttggagtgggttttcacatgcctgtcctacctctacaagtac
ttgtggaggatcatggtgaaggacatgaacaacatctacagtttgtacagcacactgatg
gcacacaagaaggagcatattcgcaatttcgcagcagagagcttcgctttcttgatgaga
aaggttcccgaccttgacgctctgctgacccttatgttcctggacctgcagcagaaccca
aacaagacacagggagcagggcagctgctgttcgagatgtgtaaaggagttcgacacatg
ttccactcctgtgctgcgactgctctgcctgtggctctgcacaagcttggccctaccacc
agcccgggggtctgtctgccatgggacacggtcagggatgctctggatcacatggcgcag
gccgcagccagccacgttgacatagaacacttcctggtgttgtgggagtccttacaggcc
aatgtggtggagctccttgataagatagaggccaatgaagaagaggctgcccaggcaact
gatcagcttgagaggctgctatacattttccacaccctggtctcccacagggatggagcc
aaggtcaccaatccagaggctgtttgccagacggtgttgcggttgattcagagctctgct
ctgtcgtcctcctgttcacgtctcctgctccagatcacctcatccctgctcctcggggag
aatatcaccctgcctaagtcactgatccaggaggcagttcagaaggtgtttgccagtcag
gtgggagaagccctgatagtcgagttcaccaaggagatgttcaccatgcaacagtttgaa
cagctcttcctccccagcctgcttcatttcacagctgggttgtttggctgtggagacatc
gcctctcgcaattatggcctggatcttctggtcagtcttatcctcgctaaagccccaccc
cctacagatggctccatggcttttgaaacatacccactactcttcactggacacgcggct
ggcggtgagaagagcgatcaagccaacggtacggcaccagagcaactagcagtgccagag
ctggtgctgtcattgatcagatcatgtgagcaacagagccagtgcatcactgacctgtcc
ctgccttgggccgccctcactctgctcccacacctcagacctctgactccagctagcgtt
gttcccgttgtgaccactttcctgaaccgcctgctgtgtgagatcgacagtgaaaaactg
gggaaagcgggtctgtttgtggcccgacaggccctgagctgcctcctcagtctggacagt
tctgcacagcttctctcactagtaactgtggacaagatcacgtcggtcctcaggaggttc
cccacagacctgtcagctcttctgttaggagacctctactacacgcggctgtcgctgagc
ggcgtatcgcaacatctttcacacagtgcactgctggagctcttccagatcctgcatgcc
aacctctcctccaacatctccaagatccgcctgctgactctaaggatcctctcccagttt
gaggcagacctccctccacagcctgcggccgaggacaacgcggacgtgcagccggtgttt
gccgtttgcctgcaggcggagctggtgcccgcctcggttcacgactacagggaaaagctg
cttcacctccggaagctgagacacgacctggtgcaacgctgcctgcctcaggggccgccc
ggcaccttccagcaggtgcctctacgttatcttattgctatgctgttcatcaacttcagg
ccactctgggactcagttattgaacttcttgtgagccatgccagggggatggacaacaag
gacttctggggcgtctaccatgatcacctggatatggtggcagggcaagctgagaaagaa
ctgcaaagtgattgtgaagacgatggccttagcgaagaggaagatgagatcaaccatcag
agtgagcccggctgtgacgtcattgaaagcggggacgtgggcgcgctgttcctcgagcag
ctgacgcggacctgccgccccgatgaccggactgacttccccaactttcgcagtctgctg
tggcgcgctatgacccagttccccgacagggtggaaccacgcagccgcgaactgtctcct
ctgctgctcagattcatcaggaatgagttttactctgccgacctgctggtggcacccacc
caggacctgaggaagaggagcgatgctgccctgcgggagtcggaaacaactgtggaggaa
gaggagggggaagaagaagaggaggaggaggaagaggaggaaaacatacaacagaggaag
ggaccatcaaggaaaactgctgccaaacaacttattgctcacctgaaggtttttgcccag
ttctccaaccctcgggctctttacctggagagtagcctcagcgagctctacaaccagttc
ctctgccatcaggaccagcagatccagcgagcggcgctggaatgcgtcctcacatacaaa
gaccccagcatcgctccgtacaaagagaatctggagaagctactggacgacaaacacttc
aaagaggagattgtccatttcaacatttccgaggaaacaggagtggttgaagcttcacac
agagagagactcatcccactgctcatgaggatcttgttcgggcgtttgcgcagtagatca
ggtagtaagttccagggaaagtccagcaccgcctcacggtcctccatcatcctgcgcttc
ttggcgggctgccagcccgaggagctgggaatgttcatcgacctgctgctagagccgctc
cgccatcacagccaaggttcctgtctggccgcagtagagagggccgtggccgagacggac
gtggccgccgtgctgcccctgggccgccagcagaacttgctcgacatcattaacgtgctg
atccacaaagttggccacctcattcacatgtacctgccgaaggtgctgcagatcctgctg
tgtgtcgtcgcctctgtgtccaccatcctggacaagagggagcagctccgtgcaggttgc
atcagtcctctgaagaacctgaggcgacttggcctcctcagggtgcaagactttttcgag
tgcttcgacacgtacagcttcactccagacgagctggacgccgtcttcgcggccgtcgtg
tggcctcaggtatgtcgtctccccactgagagcccttactcgccgacccccctgctcaaa
ctcatccacgtgtggtgtaaaaatgccaggtactaccccctccttgccaagcaaaagccg
aaccacccagagtatgatatcctcctcaacgtcttcgccctcctgtttgcaaagaacgcc
tccccaatcaccatcaacgtcgtaatggatatagccgagaccctagcaaccgcagaggac
ttcgttgcctcggagacggagacagagctgacggtcaacgactgcgtgttctcaaagccc
gaggagggatccctcatcgccgcagactctttaactctgggctccaaggtgctgctgcct
cacgtctccaccgtgctgcggtacctcagtggaatcgtgagcaacaccgccagactcagg
aagaagaaattcagggcgcaggtgtccaaagagctcaacatcctctccaagatcagtcga
tttgtgagtgacaaggagcagagctcagtgctcgtcagcctcttggttccctacctccag
aaaggcaacaaccctcaggagacggtcctcgacatcctggccaccgtgcagaacctgctg
cgacagtgtgtgcaaccgtccatgtttctgcagcctctcagcaaactcttctccgtcatt
cacgagaagctgaccagaaaggccctcaccagcgccttccagactttgtcagactttgag
ccttcactcacatacatcacggatgtggcagcaaagctcaacgccttcgacagccggcac
ttagacgaggtctacttcgacgtgcgcctcacagccttccaggacgctagcaggcggatc
agagagatgcaaactctggacctggactacatccgcaccgtcgtacatatctgcttccac
acctacgagattggggacatgtcgctggcagacaacgccaccttgtgtctgtctgcggta
attacccagatcgcagcaatcggagctggagagcggacgtacaaggacatcattcaacac
acgatcctggatgctgttcgcaaagggctccgcagaaagacagaaagcgttcaacatgaa
tacaccagtgttctggcctgcttggtgaaaacctttccctccaggaaagacttcagagac
ctggttcagctcaccaactacagcgatccagagtctgacttcttcgagcacatgaagcac
atccagatccaccgcagaggtcgcgcgctgaggaagctggccaagcagctgaccgacggc
accgtagcgatgacctcccgctccctccagcagtacatcatgccctacgccttgaccgcg
ctgacggatgaaaagatgctgaagcacgaaaacttaataacggcatcggtggagatggtg
ggcgcagtgtgccgcaagctgacgtggtctagatatatgtactacctgaagcaagtcatc
cacctcctgcagaccgcgcaggtggagcagaagctggctgtcagtttgcttgtcacagtt
cttgaggcgttccattttgactatgagacgctgagcagagaaatggaagctgctaaagcc
agagaagcgggtacggccacagtcgatgtgggagacgaggaacaagctgaagcagacgaa
tcggatgcgagcgatgacgaggagccaatggagatcgacaacaaggcagatttgtctgct
gttcccatggaaacggacaacaacggcgaaaaggaaagcggcgtggttgagaagacggcc
accgctgcagccactgggccggcggcccctaaaccgcccccagtggccagcggcctgcca
caaagcgagaaggagctggaatctctgatcgccaccatccaacagactgttaccaacaac
gtgctgccacgcctgcacaagtgtctcactgctaagataaagcgcgatgacgagcacaaa
acagtgaagtcgaagggtgtgaagaacgaggaggttgcgcggatccccatagccttcgcc
atggtcaagctgatgcagactctgcctccaaacgtaatggaggccaacctgcctgggatc
ctgatcaaggtgtgtgtgctgctgaagaaccgtttccaggagatccgtgacgtggcgcga
gtcacgctcgtgaagatcctcgagacgctggggtgcaggtacctgcagtacctgctcaaa
gagatgcagagtatcctgatgaagggctaccagatccacgtgctcaccttcacggtgcac
cagctgctgctagtcctcagttccaccctgaagagcggcgacttggacccctgcatgaac
atgctcatcagtatctttaacaacgagctgtttggggctgtggccgaggagaaggaggtg
aaggggatcgtctccaaactgatggaggctcgacacagcaagagcatggactcgtacgag
ctgctggcccggttctgcagcaaggagagcatcaccaccctcattctgcctctgaaggag
atcctggagacgtcgtccagtctgaaggtctgtaaccgcgtgggcgctgtactgcggcga
gtggtcctgggtctgctggtaaatgagggcatgaccttcaaggatttcctgctgctgagc
catggactgatcagccagagtctgccactgctcaccaagagagaccgagagaaaggctca
gctcagcctccacccgacccaaggctgcctcctcccagctgcttgctcctgcctccaact
cccaaaagaggcattcagaaagctccagtcagcagccggaccaacatgcacatcctagtg
gatgcaggactcaagctgcttcacatgagcttgaaaaacatcaaagtaacattatcagaa
gcctccgctctggagatgctggatcccttcgtgctgctgctgctcgactgcatcgactcc
atgcacgtcagggtgatcacagaggctctggtggcgttcatttggctgttgaagttccct
ctcccagcgatacaacagaatgccagcacgttgaccaagcagctctttgtcctactgaag
gattactctaaggccggagctgcccggggcgagaactatgtgctggttcagaactgcttc
aagtgcatcactaaagtgctcgcgaagaagatccaaggcaacaacatcacggagacgcag
ctgcaggtgctgctgggatacgccgaggaggacatctatgaccactcccgccaggccaca
gcgttcggcctgctgaaggcaattctatcccggaagctcattgttccagagatggaggag
gtgatgaagaaggtggcccagctgtctgtaaatggcaacaatgtcatgataaggaacaac
tgtcgacagatctatgtgaagtacctactggactacccgctgggcatgaagctcagggat
cacctggacttcgtggtggctcagctgcagtatgagcacagcacaggcagagagtctgtg
ctggagatgctggcgtacgtcttccagactttccctaagaaattgctgagtcagtacagt
ggtctgttctttgccccgctggccctggtcgtggtcaacgacgactcgccgcgctgtaaa
aaaatggccaccatggccatcaaggccctgctggcccacctggacctgaacaaccagaac
actctgttcgctctagtgagcacctggctgaaatcggagaagaccagcctgcggcgtctc
ggtgctcaggtttgcggcctcttcgtggaggtggaggaggagaacttcgcccgtcgcctg
gacgagctgctgcctctgctggagaaggagctcaaccctgacaactatgaagatattgag
gaggagaagcacgagagggaagcggaccagctgctcttcagttatctgactctcatcacc
aaactgagccaacactgcgggtttctggagctcaacaagcctcaggacacgctcatcagt
atctggggtcacattgaagcccacctgcagttccctcactgctgggtgtggctcacggcc
tcgcagctcttcggtcagctgttcgcagcccagcaggcagagcagctgctttccacttgg
agaggagacggtaaagatgcctcagctccgtcggtggcctcggcctttctcaccagaaac
ctggacaagaagatgagggagttggcgttaacgttctacagtcagctgcattcaaagttc
ctggacacggcatcaggagagcaggtcataaagaacttgctgttcatcggcaaggtgatc
cacctgatttcccccgagtctgatgccactgaggaagcaatgagagaagaggaggaggag
aaggaggaggagcaccaggagaatggagacgaagggcaggaagtagaggatgagggaaag
tatgtggaggaagaagagaatgggaaagatgatcggccgcccactctgatgtggctgata
aagaaaatgtcactaatggccaagaaagaagcgtccaacacacccaaagttcccataaag
aggacatgtgtgttcaagttcctgggggcgatagcgatggacctggggagggacaagctc
ggcccctatctcaccaccatcatcgcgcctctgtaccgggagctggacagcacgtacgca
gatcaagatcccacgctgaagaacctggcgcaggagctgatcgagctgctgaagaagcaa
gtaggcctggagagcttctcgctggccttcaccgccgtgcagaaggagttctcacagagg
agagcggcccgcaagcgctacaaagcccagcaggctgtggccaatcccgaaatggccgtc
aagaagaagctcaagaagcacaaaaacaaaatcgaagccaagaagagaaagatcgagttt
caccggcctggatataaagccaagaagcggcgcaggcacgccctcaaagacttggccatg
gtggagtga
DBGET
integrated database retrieval system
