Betta splendens (Siamese fighting fish): 114862868
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Entry
114862868 CDS
T08231
Symbol
sorcs3a
Name
(RefSeq) VPS10 domain-containing receptor SorCS3 isoform X3
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bspl04131
]
114862868 (sorcs3a)
Membrane trafficking [BR:
bspl04131
]
Endocytosis
Others
Others
114862868 (sorcs3a)
Endosome - Lysosome transport
114862868 (sorcs3a)
Endosome - Golgi transport
114862868 (sorcs3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
114862868
NCBI-ProteinID:
XP_029019449
UniProt:
A0A6P7NPI0
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Position
1:complement(18323762..18550908)
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AA seq
1240 aa
AA seq
DB search
MGTWAGFCPDLHLSLGIWVIIAAHTIQNAKAEISCASCPSPVQLYAEDLKLGVRTDPTKK
TSTLKSIRIELEKLGIGEENAGADDHHHTGDSAEDVPLFVQQISSDGVSKKNYTTGSSEE
SHRVSQEHRGTDLNVDAALPRAKRSGPEFSELSRSGWTGRTSVDASAPDDRGSLLEGHRQ
GRSDFKRNRDEERGDMRQDEPKITSSTFALTGDSAHNHAVVYWSGQNSSVILILTKLYDF
HIGSVTESTLWRSTDYGSTYDRMNDKVGSKAVLSYLYVCPTNKRKIMVLTDPEFESSVLI
SSDEGASYQKYRLTFYVASLLFHPTEEDWALAYSHDQKLYSSVDFGRKWQLIHEQVTPNR
FYWSVLGLDKDPDLVHMEAHTPDGNVQYVTCRAQMCTDANRNYPFPGYIDISSLVVQDDY
IFIQVPTSGRATYYVSYRRESFIQIKLPKYSLPKDLHIVSTDGKQVFAAVQEWNQNDTYN
LYLSDTGGIYFTLAMENVKTTRGITGNQMLDLYEVAGIKGMLIANRRQDNQVKTYITYNK
GRDWRLLQAPAVDLDGNDIHCILPFCSLHLQLQMSENPYLSGTISTKSSAPGIIVATGNI
GPELSYNNVGMFISSDAGNSWRQIFEEEHNVWFLDKGGALVAVKQPSVPTRHLWVSFDEG
RQWTQHSFSSVPLFVDGVLVEAGTENQIMTFFGHLSHRSEWQLIKIDYKSIFSRKCTEED
YQTWHLHNQGEPCVMGQKQIYMKRRPGNYCMLGKDYSRILSADSCICRAHDFECDYGYER
HGDGNCRPAFWFNPSSVSRSCSHGQNYLNSTGYRKVVMNNCTKGVKEMYTARKQQCPNRP
PKGLLLTTKDSKLSVNMGTNVTFLVHLDEGDSLRTNIQLDFGDGTAVSYSNLSWTEEGIK
HVYKSAGIFRVTALAENPLGYETTTLFLHVTCPLEHVQLVAPFVVIKNKEVNITAVVLPS
HTRTVTYFWWLGNNSEPVITLDGSISYTFSSEGMHTLTVQVAAANTILQDTKTIAVKEFF
KSLLLSFSPNLEEFNPDIPEWRRDVGRVIKKALLQVSDFPEEQLLVAVFPGIPTAAELFL
LPSKNQSTSKKKSEDELEQVSDIIVSALNQNLVEFELKPGVRVIVYNTQLTLAPLVDSNP
RHSSSAMLMLLSVVFLGLAVFLIYKFKRKIPWINVYAEVNQEKEQEMIGSVGQGDSTPKI
TLSEFSTSKELMDKELEARVKRGVGNACESTREIPNCTSV
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atggggacttgggctggcttctgcccagacttgcacttatctcttggtatctgggtgatc
atagccgctcataccatacagaatgccaaggcggagataagttgcgcgtcttgcccgtcg
cccgttcaactgtacgcagaggacttaaaactgggggttcgcactgaccccacaaagaaa
acgagcactctaaaaagcatccgaatagagttggagaaactagggattggcgaggaaaat
gccggagcagacgaccaccatcacacaggcgattccgcggaggatgtccccctgtttgtg
caacaaatcagttcggatggagttagtaagaagaactatacgaccgggtccagtgaggaa
agtcaccgcgtcagtcaggagcacagaggtaccgacttgaatgtggatgctgcgctcccg
agagccaagagaagcggtcctgagttttccgagttgagcaggagcgggtggaccggccgg
accagcgtggatgcgagcgcaccggacgaccggggctcactgctggagggacaccggcag
ggcaggtccgattttaaacggaacagggacgaagaaaggggggatatgcggcaggatgag
cccaagatcaccagcagcaccttcgctctgacgggggactctgcgcataaccacgcggtg
gtgtactggtcagggcaaaacagcagcgtgatcctgatcctgaccaagctgtatgacttc
catattggcagtgtcactgagagcactctgtggagatctacagactatggctcaacatat
gacagaatgaatgacaaagtcggatccaaggcggtgttgagttacctgtatgtatgtccg
actaacaagcggaagattatggtgttgacagatccagagtttgagagcagcgtactcatc
agctctgacgagggagccagttaccagaagtatcgtctcaccttttatgttgccagcctt
ttattccaccctactgaagaggactgggctttagcttacagtcatgaccaaaagttgtac
agctcggtggactttgggaggaaatggcagctcatccatgaacaggtcacgccaaacaga
ttctactggtctgtcttaggccttgacaaggatccagatctggtgcacatggaggctcac
acaccagatggaaatgtgcagtatgtcacatgcagagcccagatgtgcacagatgccaac
aggaactacccgttccctggatacattgacatcagctccttggtggttcaggatgactac
atcttcatacaggttcccacatcaggtcgagccacgtattacgtctcctacaggagagag
tctttcatacaaatcaaactgcctaaatattctttgcccaaggatttacacattgtcagc
actgatgggaagcaggtatttgctgcggtacaggagtggaaccagaatgacacctataac
ctctatctgtctgacaccggaggaatctacttcaccttggctatggaaaatgtcaagacc
actaggggcatcactggaaaccagatgctggatctgtacgaggtggcaggaattaaaggc
atgctgatagctaacaggagacaagacaaccaggtgaagacctacatcacctacaataaa
ggaagggactggaggctgctacaggcccctgctgtagacctagatggaaatgatatccac
tgcatactgcctttctgttcacttcatctccagctgcaaatgtcagagaacccttatttg
tcaggaacaatctccaccaaaagctctgcgccagggatcattgttgccacaggaaatatt
ggacctgagttgtcttacaacaatgtgggcatgttcatatcatctgatgctggcaatagc
tggagacagatatttgaagaggagcacaatgtgtggtttctggataaaggaggggccctt
gttgctgtgaaacaaccatctgtgccaactagacacttgtgggtcagctttgacgagggg
aggcagtggacccaacatagcttctcctcagtgcctctctttgtggatggagtcttggtg
gaggctggaaccgaaaaccaaattatgaccttttttggccacctcagccatcgttctgaa
tggcagctaatcaagatagactataagtccattttcagcaggaaatgcacagaggaggac
tatcaaacctggcaccttcacaaccagggtgaaccatgtgtgatgggacaaaagcagatt
tacatgaagcggaggcctgggaactactgcatgcttgggaaagactactccaggatcctc
tcagctgattcctgcatttgccgagctcatgattttgaatgtgattatggatatgaacgg
catggggatgggaactgccgacccgccttctggttcaatccctcctctgtgtccagaagc
tgcagccatggtcaaaactaccttaacagtacagggtaccgtaaggtagtgatgaacaac
tgcactaaaggagttaaagaaatgtacacagcccgaaagcagcaatgcccaaacagacct
cctaagggacttctactgactaccaaggatagcaaactcagtgtcaacatgggaaccaat
gtcacctttttggttcacctggatgagggcgactctttgcggaccaacatccaactggac
tttggggatggcacagcggtgtcgtactccaacctgagctggactgaggaagggatcaag
catgtgtataaatctgcaggaatcttccgtgtcaccgcccttgcggaaaacccactgggt
tatgagaccacaacactcttcctgcatgtcacatgtccactggaacatgttcagcttgtt
gctccgtttgtggtcataaaaaacaaggaagtgaacataacagcagtggttctgcccagc
cacactcgcactgtcacctatttctggtggcttggcaacaatagtgagccggtaataacc
ctggatggaagcatctcatacacattctctagtgaaggaatgcacaccctaacggtccag
gtggctgcagccaacactatactgcaggataccaagactatagcagtcaaagaattcttc
aaatctctacttttatctttctcccctaatctggaggagttcaaccccgacatacccgag
tggagaagggatgtggggagagtaattaagaaggctctgctccaagtgtctgacttccca
gaggagcagctcctggtagctgtgttcccggggattccaacagctgccgagcttttcctg
ttaccgtccaaaaaccaatccacaagcaagaaaaagagtgaggacgagctagagcaagtg
tctgatatcattgtaagcgccttgaaccaaaatttggtggaatttgagctgaaaccgggt
gtgagggtgattgtgtacaacacacagttaacactggcccctttggtggactccaacccc
agacacagcagctcagccatgctgatgctactgtcagtggtattccttggcctagctgtg
ttcctcatttacaagtttaagagaaaaataccttggataaatgtatatgctgaagtgaac
caggaaaaggagcaggagatgattggttcagttggccagggtgacagcacgcctaaaatt
acattgagtgagttctccacatccaaagaactcatggacaaggaactggaggccagggtc
aaaaggggagtcggcaacgcctgcgagagcacgagggagattccaaactgtacaagtgtg
taa
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