Betta splendens (Siamese fighting fish): 114863039
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Entry
114863039 CDS
T08231
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114863039
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bspl03041
]
114863039
03009 Ribosome biogenesis [BR:
bspl03009
]
114863039
Enzymes [BR:
bspl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114863039
Spliceosome [BR:
bspl03041
]
Complex A
U1 snRNP components
U1 related factors
114863039
Complex B
114863039
Ribosome biogenesis [BR:
bspl03009
]
Eukaryotic type
Pre-60S particles
Helicases
114863039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
114863039
NCBI-ProteinID:
XP_029019688
UniProt:
A0A6P7NNS9
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All DBs
Position
1:7978944..7985540
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AA seq
636 aa
AA seq
DB search
MPGFSDRDRGRDRGYGGGPPRFGGGGGGGNRGGPPVGKFGNPGERLRKKHWNLDELPKFQ
KNFYQEHPDVTHRPLQDVEQYRRSKEVTVKGRDCPKPIVKFHEAAFPSYVMDVIVKQNWT
EPTPIQSQGWPVALSGKDMVGIAQTGSGKTLAYLLPAIVHIQHQPFLEHGDGPICLVLAP
TRELAQQVQQVAAEYGRASRLKTTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECG
KTNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKEVRQLAEDFLK
DYVQINIGALQLSANHNILQIVDVCNDMEKEDKLIRLLEEIMSEKENKTIIFVETKRRCD
ELTRRMRRDGWPAMGIHGDKSQQERDWVLNEFRYGKAPILIATDVASRGLDVEDVKFVIN
YDYPNSSEDYIHRIGRTARSQKTGTAYTFFTPNNMKQASDLISVLREANQAINPKLIQMA
EDRGGRGRGGRGGYKDDRRDRYSGGGRSSFGGGSYRDRDGDRGFGSGPKSAFGGSKAQNG
GNYGGNSGSSTGNYGNNSYTNSNGQGNFGAPANQVGAFGNQSFQGPPQFGAMQRASQNGM
NHPPFPFNSQPPPPQAQQPPPPPPMVPYPMPPPFPQ
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgcccgggttttcagacagagatcgcggcagagatagagggtatggcggagggccccct
cgttttggtggaggtggtggtggaggcaatagaggtgggcctcctgttggaaagtttggc
aatccgggtgagaggctgcggaagaagcactggaaccttgatgagcttccaaagtttcaa
aagaacttctaccaggagcacccagatgtgacccataggccacttcaagacgttgagcag
tacagaagaagcaaagaagttacggttaaaggcagagattgccctaaaccaattgtaaag
ttccatgaagctgcttttccaagttatgtcatggatgttatagtaaaacagaactggact
gaaccaactcccattcagtctcaggggtggccagttgccctcagtggaaaagacatggtt
ggcattgctcaaactggttctggcaaaacccttgcatacctcctgcctgcaattgtgcac
atccaacatcagccattcttggagcatggagatggacctatttgcttggtgctggcgcca
actcgtgagctagctcagcaggtgcaacaagtagctgctgaatatggcagagcctcccgt
ctcaagactacatgtatttatggtggagcacccaaaggacctcaaatcagggaccttgaa
agaggtgttgagatatgcatcgctacaccaggtcgtcttattgacttcctggagtgtgga
aaaaccaacttgcgccgttgcacttatctggtcttagatgaagctgaccgcatgctggac
atgggttttgaaccacagatccgcaagatagttgaacaaattcggccagaccgtcagacc
ctaatgtggagcgccacctggcccaaagaagttcgccagctggctgaggacttcctgaag
gactatgttcagatcaacatcggggcactgcagctcagtgccaatcacaacatcctgcag
atagttgatgtttgtaatgacatggagaaggaggacaaactaattcgtttgttggaagaa
ataatgagtgaaaaggaaaataagacaattatttttgtggaaaccaaaaggcgatgtgac
gaacttactagaagaatgagacgagatgggtggccagcaatgggaattcatggagacaag
agccaacaggagagggattgggttcttaatgagtttagatatggcaaggctccaatcctc
atcgctacagatgtggcctcccgtggcttagatgtggaggatgtgaaatttgtcatcaat
tatgactaccctaactcctccgaggattatatccaccgcattggacgcacagcccgaagt
caaaaaacgggcacagcctacaccttcttcacgcccaataacatgaaacaagccagtgac
ctgatctctgtgcttcgtgaggccaaccaggccataaatcccaagctgattcaaatggca
gaggacagaggaggtcgtggaagggggggaagaggtggctacaaggacgaccgtcgtgat
aggtattccgggggtgggaggagcagctttggcggcggtagctacagggacagggacggt
gatagggggtttggcagtgggccaaagagtgcctttggtggcagtaaggcccaaaatggt
ggcaattatggtggcaatagtggtagctctactggtaactatggcaacaacagctacacc
aacagcaatggacagggtaattttggtgcaccggcaaaccaggtgggtgcctttggtaac
caaagcttccaaggcccccctcagtttggggccatgcagagggcctctcagaatggcatg
aaccacccaccattcccttttaactcccagccacctccaccacaggcccaacagccgcca
cctccaccaccaatggtgccctaccccatgccaccaccttttcctcagtag
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