Betta splendens (Siamese fighting fish): 114863089
Help
Entry
114863089 CDS
T08231
Name
(RefSeq) LOW QUALITY PROTEIN: NACHT, LRR and PYD domains-containing protein 12-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
bspl04054
]
114863089
Pattern recognition receptors [BR:
bspl04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
114863089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
FISNA
NLRC4_HD2
LRR_6
NOD2_WH
LRR_1
PRY
LRR_4
SPRY
LRR_8
AFG1_ATPase
Motif
Other DBs
NCBI-GeneID:
114863089
NCBI-ProteinID:
XP_055367908
UniProt:
A0A9W2Y1G6
LinkDB
All DBs
Position
9:complement(6080317..6093517)
Genome browser
AA seq
1267 aa
AA seq
DB search
MSVWVEEEDSAESPGSRYVSMKNDWSRCKPPSFSPEPGAPDTKGQNQRQSAEPPEPSCLS
MKSDWSRSSPLNFSSEPGASDTKVNQQSSEVPSAQSVQQHQTHMDSIFMLLEENIVTFVK
KELKKIQQVLIPDYPECLESHREEELDGEDEEQRRSSSRDAFLKITVNFLKRMKQEELAD
CLQSRTSAAVCRRQHKSHLKQKFQCVFEGIAEAGNPTLLNQIYTELYITEEGVGEVNDEH
EVRHIETASRKLDRAETSIRAEDVFKGSAGRDGAIRTVMTKGVAGIGKTVLTQKFTLDWA
ENKVNQDIHFTFPFTFRELNVLKKRRFSLVELVHHFFTETKAAGICSFEHFQVVFILDGL
DECRLPLDFNNTKTLTDVTESTSVDVLLTNLIRGNLLPSARLWITTRPAAANQIPPGCVD
MVTEVRGFTDPQKDEYFRKRFRDEQQATTIISHIKTSRSLHIMCHIPVFCWITATVLEDV
LKSREGGELPKTLTEMYIHFLLVQTKVKNIKYDGGAETDPHWNKKSRKMIESLGKVAFEE
LQKGNLIFYESDLTECGIDIRAASVYSGVFTQVFKEERRLYQDKVFCFIHLSVXEFLAAL
HVHLTFINSGINLMSQQQPASRSKRFRNKEHECTQFYHDAVDKALQSPNGHLDLFLRFLL
GLSLQTNQTLLQGLMTQSGSSLQTSEETVQYIKRKISESPSAEKSINLFHCLNELNDCSL
VKQIQQNLRSGHLSTDELSPAQWSALVFILLSSDKNLDLFDLKDFSASEEALLRLLPVVK
ASNNALLSGCKLSKRSCEALSSVLSSQSSSLRELDLSNNNLQDSGVKLLSVGLKSPHCRL
ETLRLSGCSLSQISCDSVVSALKSNPTHLTQLDLSNNDLQDSGVKQLCGFLESCNCRLKT
LRLSHCGLSEISCDSLVSALKSNLTHLTQLDLSYNNLQDSGVKELCGFLECPHCRLETLR
LSVCDLSERSCEALSSVLSSQSSSLRELDLSNNNLQDSGVKLLSAGLKSPHCRLETLRLS
GCLLSEEACVSLASALSSNPSHLRELDLSYNHPGDSGVELLSAGVKDPHWRLDTLRVEPG
GVRWLTPGLSKYFCQLTIDTNTVNRKVQLSDKHRKVTRVEEDQSYPDHPDRFDWWAQLLC
SNGLTGRYYWEVEWRGYIYISVSYSGIRRKGVSEGCLFGHNDQSWSLYCSNGSYSVRHNN
IVTPISSSVSHRVSVYVDCPAGSLSFYRVSSDKLIHIHTFNTTFTEPLYPGFGILYPGSS
VSLCDVP
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtttgggtggaggaagaggacagtgcggagtctccaggatccagatatgtgtct
atgaagaatgactggtccagatgtaagcctccatcattcagtcctgaacctggagcccca
gacacaaaaggtcagaaccagagacaaagcgcagaacctccagaaccgagttgtctgtct
atgaagagtgactggtccagatcatctcctctgaacttcagtagtgaacctggagcctca
gacacaaaagtgaaccagcagagctcagaggttcctagtgctcagtctgtccagcagcac
caaacacacatggactccatatttatgctgcttgaagaaaacattgtcacatttgtgaag
aaggagctgaagaagatccagcaggttctgattccagattacccagaatgcttagagagt
cacagggaggaggagttggatggtgaggatgaagagcagaggaggagcagcagcagagat
gcgtttctgaagatcacagtgaacttcctgaagaggatgaagcaggaggagctggctgac
tgtctgcagagcagaacttcagctgcagtttgtcggcgtcagcataaatctcatctgaag
cagaagttccagtgtgtctttgaaggcatcgctgaagcaggaaacccaacccttctaaac
cagatctacaccgaactctacatcacagaggaaggggttggagaggtcaacgatgaacat
gaggtgagacacattgaaacagcctccaggaaactagacagagcagaaacaagcatcaga
gcagaagatgtctttaaaggctcagctggaagagatggcgccatcagaacagtgatgaca
aagggagtggctggcattgggaaaacagtcctaacacagaagttcactctggactgggct
gaaaacaaagtcaaccaggacatacacttcacatttccattcaccttcagagagctgaat
gtgctgaaaaagcgaaggttcagcttggtggaacttgttcaccacttcttcactgaaacc
aaagcagcaggaatctgcagctttgaacatttccaggttgttttcatcttggacggactg
gatgagtgtcgacttcctctggacttcaacaacactaaaaccctgactgatgtcacagag
tccacctcagtggatgtgctgctgacaaacctgatcagggggaacctgcttccctctgct
cgcctctggatcaccacacgacctgcagcagccaatcagatccctcctgggtgcgttgac
atggtgacggaggtcagagggttcactgacccacagaaggatgagtacttcaggaagaga
ttcagagatgagcagcaggccacaaccattatctcccacatcaagacctcacgaagcctc
cacattatgtgccacatcccagtcttctgctggatcactgctacggttctggaggatgtg
ttgaaaagcagagagggaggagagctgcccaagaccctgacggagatgtacattcatttt
cttctggttcagaccaaggtgaagaacatcaagtatgatggaggagctgagacagatcca
cactggaataaaaagagcaggaagatgatcgagtctctgggaaaagtggcttttgaggag
ctgcaaaaaggaaacctgatcttctatgagtcagatctgacagagtgtggcatcgatatc
agagcagcctcagtttactcaggagtgttcacacaggtctttaaagaggagagaagactg
taccaggacaaggtgttctgcttcatccatctgagtgtttaggagtttctggctgctctt
cacgtccatctgaccttcatcaactctggaatcaatctgatgtcacaacaacaaccagca
tccaggtctaaacggtttagaaataaggaacatgaatgtacacagttttaccatgatgct
gtggacaaggccttacagagtccaaatggacacctggacctgttccttcggttcctcctg
ggtctttcgctgcagacaaatcagactctcctacaaggtctgatgacacagtcaggaagt
agtttacaaaccagtgaggaaacagttcagtacatcaagaggaagatctcagagtctccc
tctgcagagaaaagcatcaacctgttccactgtctgaatgaactgaatgattgttctcta
gtgaagcagatccaacagaacctgagatcaggacatctctccactgatgaactgtctcct
gctcagtggtcagctctagtcttcattttactgtcttcagacaaaaaccttgatttgttt
gacctgaaggatttctctgcttcagaggaggctcttctgaggctgctgcctgtggtcaaa
gcctccaacaatgctctattaagtggctgtaagctgtcaaagagaagctgtgaagctctg
tcctcagttctcagctctcagtcctctagtctgagagaactggacctgagtaacaacaac
ctgcaggattcaggagtgaagctactgtctgttggactgaagagtcctcattgtcgactg
gagactctcagattgagtggctgcagtttgtcacagatcagctgtgattctgtggtctca
gccctgaagtccaacccaacacatctgacacaactggacctgagtaacaacgacctgcag
gattcaggagtgaagcagctgtgtggttttctggagagttgtaactgtcgactgaagact
ctgagattgagtcactgcggtttgtcagagatcagctgtgattctctagtctcagctctg
aagtccaacctgacacatctgacacaattggacttgagctacaacaacctgcaggattca
ggagtgaaggagctgtgtggttttctggagtgtcctcactgtcgactggagactctgaga
ctgagtgtgtgtgacctgtcagagagaagctgtgaagctctgtcctcagttctcagctct
cagtcctctagtctgagagaactggacctgagtaacaacaacctgcaggattcaggagta
aagctactgtctgctggactgaagagtcctcactgtcgactggagactctcaggctgtca
ggctgtctgctctcagaggaagcttgtgtctctctggcctcagctctgagctccaacccc
tcccatctgagagagctggacctgagctacaatcatccaggagactcaggagtggagctg
ctgtctgctggagtcaaggatccacactggagactggacactctcagggtggagcctggt
ggagtccgatggttgacaccaggtctgagcaagtatttctgtcaactcaccattgacaca
aacacagtgaacaggaaagtacaactttctgacaaacacaggaaggtgacacgtgtggag
gaggatcagtcatatcctgatcatccagacagatttgactggtgggctcagctgctgtgt
agtaatggtctgactggtcgctattactgggaagttgagtggagaggatacatttatata
tcagtgagttacagtgggatcagaagaaaaggagtcagtgaaggatgtttgtttggacac
aacgatcagtcctggagtctatactgctctaatggtagttactctgtcagacacaataac
atagtaacacccatctcctcttctgtgtctcacagagtatcagtgtatgtggactgtcct
gctggttctctgtccttctacagagtctcctctgacaaactgattcacattcacaccttc
aacaccacattcaccgaacctctttatcctggatttgggatcttgtatcctggttcttca
gtgtctctgtgtgatgtgccgtag
DBGET
integrated database retrieval system
