Betta splendens (Siamese fighting fish): 114863228
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Entry
114863228 CDS
T08231
Name
(RefSeq) transcription factor Sox-10-like
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bspl03000
]
114863228
Transcription factors [BR:
bspl03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
114863228
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sox_N
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
114863228
NCBI-ProteinID:
XP_029020001
UniProt:
A0A6P7NJD4
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Position
1:complement(9318907..9322895)
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AA seq
497 aa
AA seq
DB search
MSGEEHSLSEAELSPGGSDDGHSLSPTQPGAPRGRDSPVTGQQLTTLCVADGSGDDGGRA
KSEEEDDRFPIGIREAVSQVLDGYDWTLVPMPVRINNGNKTKPHVKRPMNAFMVWAQAAR
RKLADQYPHLHNAELSKTLGKLWRLLNENDKRPFIEEAERLRKQHKKDYPEYKYQPRRRK
NGKLMPASESDGQGEGEASHSQSHYKTLHLEHNGGAGSPLGELHHHHHHHHHSGQGHSPP
TPPTTPKTELQSGKLSDAKREGAAGAAGGSGGSRGGLGVGPEGAPSGPPSSGVKPHIDFG
TMDIGEISHEVMSNIEPFDVNEFDQYLPPNGHPQSGSGAAAAAAGSSASSYAYALAAASG
HSAWLSKQQQQPQTSPSSADPSKAQIKSESASGSHYAEASSSPTSGAHVTYTPIGLPHYG
SAFPSLASRAQFEYGEHQAPGAYYTHSSQAPGLYSAFSYMGPTQRPLYTTIGDPSSVAPS
HSPTHWEQPVYTTLTRP
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcgaggagcacagcctgtccgaggcggagctgagtcccggagggtcagacgac
ggtcactcgctgtcgccgactcaacccggggcgccccgcggccgggactcccccgtgacc
gggcagcagctgaccacgctctgcgtggcggacggcagcggggacgacggagggagagcc
aagtcggaggaggaggacgaccgcttccccatcggcatcagggaggcggtcagtcaggtg
ctggacggatatgactggacactcgtgcccatgccggtgcgcatcaacaacggaaacaag
acgaagccccacgtcaagaggccgatgaacgccttcatggtgtgggcgcaggcggcgagg
aggaagctggccgaccagtacccccacctgcacaatgcggagctcagcaagaccctcggc
aaactctggaggttgctgaacgaaaacgacaagaggccattcatcgaggaggcggagagg
ctgcggaaacagcacaagaaggactaccctgagtacaagtaccagccccggcgacgcaaa
aacggcaaactgatgcccgccagcgagtctgacggccagggggaaggggaggccagccat
tcccagtcacattacaagactctgcacctggagcacaacggtggggcgggatctcccctg
ggtgaactccaccaccaccaccatcaccaccaccattctggtcagggtcacagccctccc
acaccccccaccactccaaagacagagctccagtctggcaaactgtcagatgccaagcgg
gagggagcagcgggagcagctggagggtcagggggctccaggggaggcctcggggtggga
cctgaaggagcccccagcggtccaccatcgtcgggcgtcaaaccccacatcgattttggc
acgatggacatcggggagatcagccacgaggtgatgtccaacatcgagccgttcgacgtg
aacgagttcgaccagtacctcccgcccaacggccacccgcagagcgggagcggcgccgcc
gccgccgcggccgggtcctcggcctcgtcctacgcctacgccctggctgcagccagcggc
cactcggcctggctctccaagcagcagcagcagccgcagacgtcgccgtcgtccgccgat
ccctccaaggcgcagataaagagcgagtccgcgtccgggagccactacgccgaggcctcg
tcctcgccaacctcaggcgcccacgtgacctacacccccatcggcctccctcactacggc
tccgctttcccctctctggcctccagggctcagtttgagtacggggagcaccaggcccct
ggggcatactatacccactcgagccaggccccagggctgtactcagccttctcctatatg
ggtcctacacagaggcctctgtacactaccataggagacccctccagcgtggccccctcc
cacagccccacacactgggagcagcctgtttacaccacactcacaagaccttga
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