Betta splendens (Siamese fighting fish): 114863257
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Entry
114863257 CDS
T08231
Symbol
sox5
Name
(RefSeq) transcription factor SOX-5 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bspl03000
]
114863257 (sox5)
Transcription factors [BR:
bspl03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
114863257 (sox5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
114863257
NCBI-ProteinID:
XP_029020010
EnsemblRapid:
ENSBSLG00000011237
UniProt:
A0A6P7NPL7
LinkDB
All DBs
Position
9:4650730..4804835
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AA seq
785 aa
AA seq
DB search
MLLLSRETDPYSSMLTEPELPQECNRMSSKRPASPYGGTDGEVTMATNRQRVEDEESKGL
GGVIHLPLASYCGKVSPRSPPNRILDSPPNTDQDGTKGSSLSPYAQHNATSPGKEEGGGR
ACSDGGSAAGALGTPERRKGSLADVVDTLKQRKMEELIKNEPEEAPSIERLLSKDWKDKL
LAMGSGHIGEIKGTPDSLAEKERQLMGMIGQLSSLREQLLAAHEEQKKLAASQMEKQRQQ
MELAKQQQDQIARQQQQLLQQQHKINLLQQQIQQVQGQLPPLMIPVFPPDQRTLAAAAAQ
QGFLMPPGFNYKPGCSDPYPLQLIPTTMAAAAAATPGLGPLQLQQLYAAQLAAMQVSPEA
KQRGGSLLPQANLGTHSPPGNTHPQSEKSRSSPPPSKTKDSEGAQPLNLSAKPKASESKS
PNSPPTSPQVPAAAAAPKLGPASSMKHSVAPSSIGGPPTRVSSIADLLSSLSSTAYLNDH
EAVSKAFAEARQMKEQLKREQQVLDAKVAAVSNLSLNNGRSDKDKAALESLSQQLKQQSE
DKFSHAMLDFTMSGDSDGSPSVSDSRIFRESRGRSSNEPHIKRPMNAFMVWAKDERRKIL
QAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLV
DGKKLRIGEYKAIMRSRRQEMRQYFSVGQQGQLPLSSGGVVYPGALSMAGMPSPQMPSEH
SSMSSSPEPTANHHQGAHMGLKGDEPRIKEEELRLDDNNGDVYDDFDYEDEEADYASDNE
NHIAQ
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgttgttgttgtcgagggagacggacccttactccagcatgctcactgagcctgagcta
cctcaggagtgtaacaggatgtcttccaagcgaccagcctctccatatggggggacagat
ggagaggtaaccatggcaaccaacagacagcgagtggaggatgaggagagcaagggactg
ggcggtgtcatccacctccccctggcgtcctactgtggcaaggtgtcccctcgctcgccc
cccaaccgcatcttggacagcccccccaacacggaccaggatggcactaaggggagctcc
ctgagcccctacgcccagcacaacgctacctcacccggcaaagaggagggcggggggcgc
gcctgcagcgacgggggctcggccgcgggcgccctggggaccccggagcggcgcaagggc
agcctggcggacgtggtggacacgctgaagcagcgcaagatggaggagctgatcaagaac
gagccagaagaggcccccagcattgagaggctgttgtcaaaggactggaaggataaactt
ttggctatgggctcagggcacatcggagaaattaaaggcaccccagacagcctggcggag
aaggagcgccagctcatgggcatgatcggccagttgagcagcctgagggagcagctcctg
gcggcgcacgaggagcagaagaagctggccgcctcgcagatggagaagcagaggcagcag
atggagctggccaagcagcagcaggaccagattgcccggcaacagcagcagcttctgcag
cagcaacacaaaatcaacctcctgcagcaacaaatccagcaggtccagggccagctccct
ccgctcatgattcccgtctttcctccggaccagaggaccctggcggcggcggcggcccag
cagggcttcctcatgccccctggcttcaactacaagcccggctgcagtgacccgtaccct
ctccagctcatccccacaacgatggctgctgccgctgccgccacgccgggcctggggccc
ctccagctccagcagttgtacgcggctcagctggcggccatgcaggtctccccggaggcc
aagcagcgcggaggcagcctgctgccccaagccaacctgggaacgcactccccaccaggc
aacacacacccacagagcgagaagagccgcagctccccgccaccgagcaagaccaaggac
agtgagggtgcacagccactgaacctgtcggccaagcctaaggcatctgagagcaagtca
cccaactcccccccaacttccccacaggtccctgctgccgctgccgcccccaagctgggc
cccgccagctccatgaagcacagtgtcgccccctccagcatcggaggaccgccgacccga
gtcagctccatagcagacttattgtcgtcgctgtcctccaccgcctacctgaacgaccac
gaggcggtgagcaaggcgttcgccgaggcccggcagatgaaggagcagctgaagagggag
cagcaggtcctggacgccaaggtggcggcggtcagcaacctcagcctcaacaacggacgc
tcggacaaggacaaagctgccttggagagtctgagtcagcagctgaagcagcagtcggag
gacaagttcagccacgccatgctggacttcaccatgagcggagactctgacggctccccg
agcgtgtcagactccaggatattccgcgagtcccggggccgcagcagcaacgagccgcac
atcaagcggccgatgaacgccttcatggtctgggccaaggacgagcggaggaagatcctc
caggccttccccgacatgcacaactccaacatcagcaagatcctgggctcgcgctggaaa
gccatgaccaacctggagaagcagccgtactacgaggagcaggctcgcctcagcaagcag
cacctggagaagtacccggactacaagtacaagccgcggcccaagcgcacctgcctggtg
gacggcaagaagctgcgcatcggcgagtacaaggccatcatgaggtcccgccggcaggaa
atgagacagtacttcagtgtggggcagcagggccagctgcccctgtcctcggggggcgtg
gtctacccaggcgccctgtccatggcagggatgccctcgccccagatgccctccgagcac
tcgagcatgtccagcagccccgagcccaccgccaaccaccaccagggcgcccacatgggc
ctgaagggcgacgagccgcgcatcaaggaggaggagctgcggctggacgacaacaacggc
gacgtgtacgacgacttcgactacgaggacgaggaggccgactacgccagcgacaacgag
aaccacatcgcccaatag
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integrated database retrieval system
