Betta splendens (Siamese fighting fish): 114863888
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Entry
114863888 CDS
T08231
Symbol
vimr2
Name
(RefSeq) peripherin isoform X1
KO
K05640
glial fibrillary acidic protein
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bspl04131
]
114863888 (vimr2)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
bspl04812
]
114863888 (vimr2)
Membrane trafficking [BR:
bspl04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
114863888 (vimr2)
Cytoskeleton proteins [BR:
bspl04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
114863888 (vimr2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
IFT57
ATG16
APG6_N
CENP-F_leu_zip
Motif
Other DBs
NCBI-GeneID:
114863888
NCBI-ProteinID:
XP_029020231
UniProt:
A0A6P7NJZ9
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All DBs
Position
10:complement(14556864..14566255)
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AA seq
379 aa
AA seq
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MAMLRVSSYRKLFEQDAWRRNAGLRMPRGAALDKCDRDTFDFVAAKSLGEDGLKLLAQER
RTIAALNDRLVKLIELARRLEEENGSLECQIAELEAQPSSAPASVSISTAVAQADRSLDA
VVERLRRERDEIVCESRALQDELEGLMREHEEAARRRSSVQQERQHVAAEVDAVTAECLA
LRERVRVYAAQRANVEAQRTAAAERLLEPADGSTPAVAAIKFGSPAVTAALGVKEYYCRL
AESLQCVVAAAAVVCGGDAEQRDVRGAGRSVVRDWPATKDAGDMKTLVSELQKEFAELEQ
RNEELEDEAEMKRAAHMEEVAELEYTINELQHRDSSFRTQMKEQCDDYRVLLSEKMARDM
EIAAYRSLLEEEEARLCDL
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggccatgctcagagtgtcgtcctaccgcaagctgtttgaacaagacgcctggaggcga
aatgcggggctgaggatgcccaggggcgcggctcttgacaaatgcgaccgtgacacgttc
gactttgtcgctgccaagtctctcggcgaggacggcctgaagctgttggcccaggaacgc
cgcaccatcgccgccctcaacgaccggctggtcaagctcatcgagctggctcggcgcttg
gaggaggagaacgggtctcttgaatgtcagattgcggagctggaggcgcagccgagcagt
gcccccgcctccgtcagcatcagcaccgcggtggctcaggccgaccgctctctggatgcg
gtggtggagaggctgcgcagggaaagggatgagattgtgtgcgagtctagagcgctgcag
gacgagctggagggtctgatgagggagcacgaggaggccgcacgcaggaggagctcagtc
cagcaggaacgtcagcacgttgctgcggaggtggatgccgtgacggcggagtgtctggcg
ttgagggagcgggtgcgtgtctacgcggcgcagcgagccaacgtggaggcccagcgcacg
gcggcggccgagcgtctgctggagcccgctgacgggtccacgccggcggtggcagccatt
aaattcggcagccctgccgtcaccgcggccttgggtgtaaaggagtattactgccggctg
gcggagagcctccagtgcgtcgtggctgccgccgctgtggtttgtggtggtgatgcagag
cagcgggatgtgagaggagctgggaggtcggtggtcagagactggccggcgacgaaggac
gctggtgacatgaagacgctggtctctgagctacaaaaggagtttgctgagctcgaacag
cgcaacgaggagctggaggacgaggctgaaatgaagagggctgcgcacatggaagaggta
gcggagttggagtacaccataaatgagctgcagcaccgggactccagcttccgaacccaa
atgaaggagcagtgtgacgactacagggtgctgctcagtgagaagatggccagagacatg
gagatcgcagcctacaggagcctgctggaggaggaggaggcgaggctgtgcgacctgtga
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