Betta splendens (Siamese fighting fish): 114864089
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Entry
114864089 CDS
T08231
Symbol
cstf2
Name
(RefSeq) cleavage stimulation factor subunit 2 isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114864089 (cstf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bspl03019
]
114864089 (cstf2)
Messenger RNA biogenesis [BR:
bspl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
114864089 (cstf2)
U7-dependent histone pre-mRNA processing factors
114864089 (cstf2)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
RRM_Rrp7
Motif
Other DBs
NCBI-GeneID:
114864089
NCBI-ProteinID:
XP_029020569
UniProt:
A0A6P7NSQ1
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Position
10:complement(14408732..14415309)
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AA seq
508 aa
AA seq
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MANVAAAASAAAAAAAAANRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGLVVSFRL
VYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTG
APIIESPYGDSVQPEEAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQ
LAYALLQAQVVMRIVDPEIALKMLHRQTTVQPLVPSGQGGGAPPVNPPPAQSSVPVSQPQ
PLPGMHVNGAPQMMQPPSMGVVPGPMPVPGPGPGAGPVGPPGNLQHSPTGSSGQAAIERP
QGPGGIPPRGLLGDGPNDPRGGTLLSVTGEVIDPNRGYMAAPPPHHPGHQAPPVHMSQMP
TGPPMDMRAPQIGEPRNVMGDPRVPMMEPRAPPMETRGRDPRAMDARGPVVGQRVPMAGA
MPGPMPHGMGPNPVPPTRPGPGISGVPPSGGGFSPGQSQVSTQDQEKAALIMQVLQLTPE
QIAMLPPEQRQSILILKEQIQKTAGGAP
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgttgctgctgctgcctcggctgctgcggccgcggctgctgcggcgaacaga
gacccagcagttgatcgttccttgcgatcggtgttcgtgggtaacattccgtatgaagct
acagaagaacaactgaaagacatcttctctgaggtcggacttgttgtaagtttcaggtta
gtatatgacagagagacaggaaaaccaaagggatatggcttctgtgaatatcaagaccag
gagactgctcttagcgccatgcgtaacctgaacgggagagagttcagtggtcgtgctctc
cgtgttgacaatgctgccagcgagaaaaacaaggaagagcttaagagtttgggaacagga
gcccccatcatcgagtccccttatggagacagtgtccagccagaggaggccccggagtcc
atcagtagagctgtggccagtctgccaccggagcagatgtttgaacttatgaaacagatg
aagctatgtgtgcagaacagtccccaggaggcaagaaacatgctgctgcagaaccctcag
ctggcttatgctctgctgcaggcccaagtagtcatgcggattgttgacccagagatagct
ttgaaaatgctccatcgtcaaactacagtccagcctcttgttcctagcggccaaggtgga
ggagcaccaccagtcaatccacctcctgcgcagtccagtgtgccggtatctcagccacaa
cctttgccaggaatgcatgtgaatggagcccctcagatgatgcagcctcccagcatgggg
gttgtccctggaccaatgcctgtaccaggtccaggaccaggagcaggaccagtcggccct
ccaggaaaccttcagcattctcccacaggatcgtctgggcaagctgctatcgagcggcca
caaggaccaggtggcatcccccccagaggcctgctgggagatggacctaatgaccccaga
ggaggaactctgctctctgtcactggagaagtcattgacccgaatcggggttacatggca
gccccaccaccccaccacccaggacatcaagctccgcctgtacacatgagccaaatgcca
accggacccccaatggacatgagagctccacaaattggtgaaccaagaaatgtaatggga
gacccccgcgtgccaatgatggagccgcgggcccctccgatggaaaccagaggtcgagac
ccgagggcgatggacgcccgtggcccagtggtgggacagcgggtccccatggcaggagca
atgccaggccccatgcctcacggcatgggtccaaacccagttccacctacaagaccgggt
cctggtatttctggtgtgccaccgtcgggaggagggttcagtccaggacagagccaggtg
tccacacaggaccaggaaaaggctgctttgatcatgcaagttctccagctgaccccggaa
cagattgccatgttgcccccagagcagaggcagagcatcctcatcctgaaggagcagatt
cagaagacggctggcggagcaccgtga
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