Betta splendens (Siamese fighting fish): 114864135
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Entry
114864135 CDS
T08231
Symbol
pcdh20
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
114864135 (pcdh20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bspl01009
]
114864135 (pcdh20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
bspl04515
]
114864135 (pcdh20)
Protein phosphatases and associated proteins [BR:
bspl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
114864135 (pcdh20)
Cell adhesion molecules [BR:
bspl04515
]
Cadherins
Protocadherins
114864135 (pcdh20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
MRP_L53
Motif
Other DBs
NCBI-GeneID:
114864135
NCBI-ProteinID:
XP_029020631
UniProt:
A0A6P7NL58
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All DBs
Position
10:9458603..9462146
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AA seq
852 aa
AA seq
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MGHGTPDNMNWARLLQNLLLLVHLRPIGCRSVQFALPEEREPGTLAGSLRENFPAPYQLL
TQDFLWLDGSTGNLYTTERKMDREALCPEETKAEECIILLTAVVGPSGDLIQFPVIIGDI
NDNAPHFENSEIHLRVSEDVTVGTSLLLDDQATDRDAGRNGELRYHLQGDEGPFDLKVSG
HFMALTVNAALDREAQDRYQMLLVAADCGAAPLSATAALIVTVTDVDDNCPSFGSGGALS
VTLPGDSPKNTLVAQVRATDPDSGPNAAIVYSLSPRVSERAKELFSLDSLTGSIRLTRDL
QSDNSDELVLKVLASGLHCPPADTQVTVSVLPKATQEPTIKIGFIAERQNQTMVLPENQP
PTVLAVLQLEGDSSFKGSSLAIEGEVPFTLSLQNGKYLLSTSKPLDYEIKREHHISVVAQ
GGSAEGPVIVLSRSAIRVLVVDVNDNAPRFSRPHYQLEVEENNPPGAALLQVRASDADGG
ANGRVTYRLHEHAPPVFSVDPASGQLSVSASLDREQQGAHTLTVFARDSGSPPLESEATI
SILVLDQNDNAPVFLTPHFIFFIPENVPPLAPVGKLGVADLDEGGNGNIELRVVNSSGPF
VVDDTQGTLRATTSLDRETEDRYELYLLASDHGRPAALTSSARVTIFVEDINDNQPKVIL
PSSNCSCLTVSPATTAGATVTKIYAVDEDSGSNSEITYALAAPEPVPSSSPFQLDPRSGD
ITLAQQLRQEDLGMHHLFVVVRDGGKPVPLYSTVWVNLLVNQSAEPCRLDKAPTWTGTRD
LVHPPLKAPICEVQSPRYAQAALLAGLCMMLAAVFLLAVAAVLHLKQRRGKKQQIEENQI
ALRLQDKYYSDD
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgggccatgggactcctgataatatgaactgggcccggctactgcagaacctgctgctc
ctggtccacctcaggccgatcggatgccgttccgtccagttcgccctccccgaggaacgg
gagcccggcactctggccgggtcgctccgtgaaaacttcccggctccgtaccagctgctc
acccaggacttcctgtggctggacgggagcacgggcaacttgtacaccactgagcgaaag
atggatcgcgaggccctctgccccgaggagacaaaagccgaggaatgcattattctgctc
accgctgtcgtggggccctcaggagaccttatacagttccctgtgatcataggagacata
aatgacaatgcgcctcattttgaaaacagcgaaatacacctgagggtgtctgaggacgtg
actgtggggactagtttgcttttggacgaccaggcaacggaccgggacgccggtcgtaat
ggagagctgcggtaccacctacagggcgacgaggggccgtttgatttaaaggtcagcggg
cattttatggcgctgaccgtgaacgcggccctggacagggaggctcaggaccggtaccag
atgctgctggtggccgccgactgcggcgcagcccctttaagtgccacggcggctttaatc
gtcacggtgacagacgttgacgacaactgtcccagcttcggctcgggcggcgccctcagc
gtcaccctccccggggactctcccaagaacacgctggtggctcaggtcagagccacggac
ccagactcgggcccgaacgcggccatcgtttactccctcagtcccagagtctcagagcgg
gccaaggagctgtttagcctcgacagcctcactgggtccatcagactaacacgggacctc
cagagtgacaactctgacgagctggtgttgaaagtgttagctagcggccttcattgcccc
ccagcagacactcaagtgacggtatcggtgctccccaaggcgacgcaggagccgacgatc
aagatcgggttcatagccgagcgtcagaaccagaccatggtgttaccagagaaccagccc
cccaccgtcttagctgttttacagcttgagggtgacagcagctttaaaggctcctctctt
gccattgagggtgaagtgcctttcactttaagcctacagaatggcaaatatctgctttcc
acatcaaagcccctagactacgagataaaaagggaacatcatatttctgtggtagcgcag
gggggctcggctgaagggcctgtgatcgttctttctagaagcgcgatcagggtgttggtg
gtggatgttaacgacaacgccccgcgtttctcccggcctcactaccagctggaggtggag
gaaaacaacccgcccggagcggcgctgctgcaggtccgggcctcagacgcagacggcggc
gccaacggcagggtgacctacaggctgcacgaacacgcgccccccgtcttcagcgtcgac
cccgcgtcgggtcaactgtctgtgtcagcctctctggatcgggaacagcagggcgcgcac
acgctcacggtgtttgcacgagatagcggctcccctccgctggagtccgaggccacgata
tccattctcgttttggaccagaatgacaatgcacctgttttcctaacgccccactttatc
tttttcatccctgagaatgtaccgccgctcgccccagtggggaagttaggggttgcagac
ctagacgagggggggaatgggaacatagagctgcgtgttgtaaacagcagtggacctttt
gttgtggatgacacccaggggactcttcgcgccactactagcttggatcgcgagacagag
gaccgctatgaactctacctgctggccagcgatcacgggcgcccggcagctttgacttcc
tccgccagggtaactatctttgtggaggacatcaatgacaaccagcccaaagtgatcctg
cccagcagcaactgctcctgcctgaccgtctctccagcaacgacggcgggcgccacggtg
acaaagatctacgccgtggatgaggactcggggtcgaattcggagattacttacgccctg
gccgcaccggagccggtgccgagcagcagccccttccagctggacccaaggtcaggggac
atcacgttagcccagcagcttcggcaggaggacctggggatgcatcacctgtttgttgtg
gtcagagacggcgggaagccggtcccgctgtacagcaccgtctgggtcaatctgctggtc
aaccaaagcgcggagccgtgtcgcttggacaaggcgcccacgtggacggggacacgcgat
ttggtgcacccccccttaaaggcccccatctgtgaggtacagagccccagatacgcccag
gccgcgctgctagcaggcctgtgtatgatgctagcagccgtgtttctgctagccgtggcg
gcggttcttcacctgaagcagaggcgaggcaaaaagcagcagattgaggagaaccagatc
gcactcaggctccaagacaaatattacagcgatgactaa
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