Betta splendens (Siamese fighting fish): 114864270
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Entry
114864270 CDS
T08231
Symbol
si:ch211-114c17.1
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bspl03041
]
114864270 (si:ch211-114c17.1)
Spliceosome [BR:
bspl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
114864270 (si:ch211-114c17.1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_19
TPR_16
TPR_2
TPR_11
TPR_12
HrpB1_HrpK
TPR_MalT
TPR_21
HAT
Siah-Interact_N
GAT
Motif
Other DBs
NCBI-GeneID:
114864270
NCBI-ProteinID:
XP_029020832
UniProt:
A0A6P7NM05
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Position
10:12509850..12515403
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AA seq
741 aa
AA seq
DB search
MTPFFSSRINDVSATDFIMAAEGCEEMSGNGELEESPAMEPSDVPASHPIEMAEMTEENG
SAVPQPEAPVVPDPASFSVPLGAEDEERELPADFERLWKTAHDNPQDFTSWTDLLQYCEQ
EGHIIASRRALGAFLARYPLCYGYWKKFADLERRAGYNDKAEEVCVQGLQAIPLSVDLWI
HYINLLLGTLDMNLPESPLRIRSVFEDAVSAAGLDFNSDRLWDLYVEWEKEQGNMRNAAT
VLDRVLKVPTQLYNTHYDKFKEHLNSHEPKEVLSQEEYEELRALCRESQKAERAEQAQEE
KEERPPGEEEPATPEGTDTEELMQKIREQVLIRRDKVYQENEGEVRNRWHFEDSIKRPYF
HVKPLDRLQLRAWHSYLDWEITQLNKDTSDSNQNPNQAATEESEVMAESPEQSANVQGPC
DDYRVRILFERCLIACALYEEVWTRYVHYLEPQNVEEARAVYKRACEIHLTNKPNIHMQW
ATFEERHGDLSEARRVLEALEKTLPGLAVVRLRRAALERRAGQLDQSEALLQEAVAQSKE
KPVLHAFYSIKLARLLLKLGRDTSRARRVLQEALEISPDNDKLHLNLLELEVSGDPWSSA
EAVQECVTRALAAPLAPHTKIILSQRHLQFTEDFSDSIQSVLSVYEEHQKLMKELGGTKR
ESENGDEDPEKLSKTEDNSAAQVTPTMPHVPITTPPPPIMGADMNAQAGYGGYSSWYQQP
QYGSYGYQNTWNYNQGYYPPS
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgactccgttcttctcgtcgcgcattaatgacgtcagcgcgaccgatttcatcatggcg
gcagagggctgcgaggagatgagcggcaacggggagcttgaggagtctccagccatggag
ccttctgatgtcccagcttcgcatcctattgagatggctgagatgacagaagaaaatggc
agtgctgttccccagcccgaggctcctgtggtccccgaccctgcttccttctctgtgcct
ctaggtgcagaggatgaggagagggaactccctgctgactttgaacgtttgtggaagact
gctcacgacaatcctcaagacttcaccagctggacagatctgttgcaatattgcgaacaa
gagggtcacatcatagcctcacgtcgagctcttggggccttccttgctcgctatcctctc
tgctatggctactggaagaaatttgctgacctggagcgccgtgcaggctacaatgacaaa
gcagaggaggtgtgtgttcagggtctgcaggcaatccccctgagtgtagatctgtggatc
cactacatcaacctgctgcttggaactctggacatgaacctgcctgagtcacccttaagg
attcgcagtgtgtttgaggatgcagtttcagcagcgggtctggactttaactcagaccgg
ctctgggatctttatgttgaatgggagaaagagcaggggaacatgaggaacgcagctact
gtactggacagagtcctcaaagtccccactcagctttacaacacacactacgataaattt
aaagagcatctgaatagccatgagcccaaggaggtgctctcccaagaggaatatgaggag
ctgagagcactgtgccgcgaaagccagaaggcagagcgagctgagcaggcccaagaggag
aaagaggagaggccaccaggtgaagaagagcctgcaacaccggagggtactgacacagag
gaactcatgcagaagattagggagcaagtgctaattcgcagggacaaagtttatcaggaa
aatgagggagaagttcgcaacagatggcactttgaagattcgataaagcggccatacttt
cacgtcaagcccctcgaccgtctccagctacgagcctggcactcctatctggactgggag
attactcagttaaacaaggacaccagtgattccaaccaaaatccaaaccaggcagctaca
gaggagtcagaggtcatggccgagtctccagaacaatcagcaaatgttcaaggtccctgt
gacgattacagggttcgcattctatttgaacgctgcctaattgcctgtgcactgtatgag
gaggtttggaccaggtatgttcattacctggagccacagaatgtggaggaagcccgagct
gtttacaaaagagcctgtgagattcatctgacgaacaaacccaacattcacatgcagtgg
gccacgtttgaggaaagacatggtgatttatctgaggcgcggcgcgtgttagaggccctg
gaaaaaactctgcctgggttggcagtggttcgtcttcgcagggctgctttggaaagacga
gcaggtcagctggaccagtcggaggccctgctgcaggaggcggtggctcaatccaaagag
aagcctgtgttacacgctttctactccatcaaactggctcgtctgttgctgaaactgggc
agagacaccagcagagctcgtagagttttacaggaggctctggaaattagtccggataat
gataaattacacttgaacctgttggagctggaagtgtcaggagacccctggtcctcagct
gaggcagtgcaggagtgtgtaacgcgagccctggcagcgcctcttgccccacacaccaag
atcatcctgtcgcagaggcacttgcagttcacagaggacttcagtgactctattcagagt
gtgctgtctgtctatgaagagcaccagaaactaatgaaggagcttggtggaacaaaaaga
gaatcagagaacggagatgaggatccagagaagctgagcaaaactgaagacaactctgct
gcgcaagttacccctactatgccgcatgtccccatcaccacaccacctcctcctatcatg
ggtgccgacatgaatgcacaagccggttatgggggatacagtagctggtaccagcagcca
caatatgggagctatggctaccagaacacttggaattacaaccagggctattaccctccc
agctaa
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