Betta splendens (Siamese fighting fish): 114864274
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Entry
114864274 CDS
T08231
Name
(RefSeq) protocadherin-1-like
KO
K16498
protocadherin delta 1
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
114864274
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bspl01009
]
114864274
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
bspl04515
]
114864274
Protein phosphatases and associated proteins [BR:
bspl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
114864274
Cell adhesion molecules [BR:
bspl04515
]
Cadherins
Protocadherins
114864274
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
K319L-like_PKD
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
114864274
NCBI-ProteinID:
XP_029020838
UniProt:
A0A6P7NS86
LinkDB
All DBs
Position
10:19825036..19841156
Genome browser
AA seq
1019 aa
AA seq
DB search
MAAPSWEVALFLALILPLSCTAAPTDILYRVSEEQPPNTMIGSLAADQGLPDTGHLYKLE
VGSPYLRVDGKTGDIYTTEIPIDREKLKDCRNLFEGDKCFLEFEVSITDMVKGIGSGPRL
IEGRIEVQDINDNTPQFSSPILTLSIPENTHIGALFSIPMATDKDSGSNGVAEYALSTGP
DAEQLFTLQVAVDTDEKLPQLVVMGNLDREKKDSYDLTIRVVDGGKPQRASTALLRVTVT
DQNDNAPKFERNHYEAELPENSPLGHSVLQVRANDADSGTNGEIDYSLHQASETVQRLLR
IDRTTGIIYVKGLVDREEENFLKFSVVAKDRGPNSRSSKVMVTINVKDQNDNAPAIEIRG
IGLVTHYNGVANISEDMPVGTPVALVQVSDRDEGENAVVTCVVAGDVPFQLRPASESAND
RKRKYFLQTTTLLDYERVKDYRIEIVAVDSGNPALSSTNSLKVQVTDMNDNTPSFSPSLL
EVDFAEGNQPGDRVLDLIATDADSGSNAELAYSIVDSSASALFDIDTNTGEVRVKNMLDR
EIKDRYEFYVAAADKGVPSKTGTATVIINVLDRNDNDPKFTLSSYSFSVIENMPPLNPVG
VVTVNDADMGENSRVRLFVEPDNGKFLIQNGTETILSSISFDREKESTYTFRLKAVDSGD
PPRSSYVGVTINVLDENDNAPYVTKPANSSYTYLTPVTPPDTRVEVVEAEDIDSGPNAEL
VYTITGGNPYDLFHISPTSGEITLAQEFTGKHNGLHRLVVKVTDKGKPQRHTTALVHVYV
NDTKSNVSQIEALVGHSLYTPLDRDIAGDPNYSHSQRSNILYGSLAGIAGVILVIVAVVV
IRHRLQKDTKSGYQAGKKESKDLYAPKQGPKNGKGKKTKKGKAPKPAKPLEEDEEASLQK
GLKFNLINDNVNDSPRIHLPLNYPPGSPDLGRHYRSNSPLPSIQLQPQSPSASKKHQAVQ
DLPATNTFVGTGDNNSTGSDQYSDYSYKANPPKYSNKQVGEYANTPVYHRNIYWTNGVW
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccgagctgggaggtcgccctgttcctggcactcatcctgccgctctcctgc
acggctgcacccacagacatcctctaccgcgtctctgaggagcagccgcccaacaccatg
atcggcagcctggcagcggaccagggcctgccggacaccgggcacctctacaagctggag
gtgggctcgccgtacctgcgggtggacggcaagacgggcgacatctacaccacagagatc
cccatcgaccgcgagaagctcaaagactgccgcaacctgttcgagggcgacaagtgcttc
ctggagttcgaggtgtccatcactgacatggtgaagggcatcggctcagggccgcggctg
atcgaaggccgcatcgaggtgcaggacatcaacgacaacacgccgcagttctcctccccc
atcctcaccctctccattccagagaacacgcacatcggcgccctcttctccatccccatg
gccaccgacaaggactccggcagcaacggcgtggccgagtacgcgctgagcaccggcccg
gacgccgaacagctcttcacccttcaggtcgccgtggacacggacgagaagctgccgcag
ctggtcgtcatgggcaacctggaccgtgagaagaaggactcctacgacttgaccatccgg
gtggtggacggcgggaagccgcagagggcgagcaccgctctgctgcgggtcacggtcacc
gaccagaacgacaacgcgcccaagtttgagagaaatcactacgaggccgagctgccggaa
aacagtccgctgggacactctgtgctgcaggtcagagccaatgacgccgactcaggcacc
aatggggagattgactacagcctccatcaggcatcagagactgtccagaggcttctgcgc
attgaccgtaccactggcatcatctacgttaaaggcctggtggaccgcgaggaagagaac
ttcctcaagttttctgtggttgccaaagatcgtggacccaactccagaagctccaaagtc
atggtgactatcaacgtcaaagaccagaatgacaatgccccagctattgagattcgtggt
attggcttggtgacacactacaatggtgtggccaacatctctgaagacatgcctgttggt
acaccggtggccttggtccaagtctccgaccgtgatgagggggaaaatgcagtggtgacc
tgcgtggttgctggcgatgttccatttcagctcagacctgcaagtgaatcagccaatgat
cggaagaggaaatatttcctgcagacaaccaccctcctggattatgaacgcgttaaggat
tacagaattgaaattgtcgctgtagactctgggaacccagccctgtcgagcaccaactcc
ctcaaggttcaagtcacggacatgaatgataacactccttccttctccccttcactgctg
gaggtggactttgccgagggcaaccagccaggcgacagggtgctggatctcatagcaaca
gacgcagacagcggcagcaatgccgagctggcctatagcattgttgattcttctgccagc
gcgctctttgacatcgacaccaacactggggaggtgcgcgtgaagaatatgctggaccga
gagatcaaagatcgttatgagttctatgtagctgctgcagacaaaggtgttcccagtaaa
accggaactgcaactgtcattattaatgttctggatcgcaatgacaatgaccccaagttc
acgctcagcagctacagcttttctgtcattgagaacatgcctccactcaatcctgttggt
gttgtgactgtcaatgatgccgacatgggcgaaaattccagagtcagactttttgtggaa
ccagacaatggcaagtttctaatccagaacggcacagaaaccattttatccagcatctcc
tttgaccgagagaaggagagcacgtacactttccgcttgaaggcagtagattctggggac
ccacctcgttcctcctatgtgggcgtaaccatcaatgtcctagatgagaatgacaatgcc
ccttatgtcaccaaaccggccaactcctcctacacatacctgacacccgtcaccccgcca
gacacccgtgtagaggtggtggaggctgaggacattgactctgggcccaatgctgagctg
gtctacaccatcacaggcggcaacccgtacgatctgttccacatatcgccaactagtggg
gaaatcacactggcacaggaattcaccggtaagcacaatgggctgcatcgcctggtggtg
aaggtcactgacaaaggcaaacctcagcggcacaccaccgctctcgtccacgtctatgtg
aatgacaccaaatccaatgtctctcagattgaggcactggttggacacagcctctataca
cccttagacagagacatagctggagatccaaactattcccattctcagcgtagcaacatc
ttgtatggcagccttgcaggcattgctggtgtgattctggtcattgtagccgtggtggtc
atcaggcatcggctacaaaaggacaccaagagtggctaccaggctggcaagaaggagagt
aaggacctgtatgctccaaaacagggccccaaaaacggcaaagggaaaaagaccaagaag
ggaaaagctccaaaacctgccaaaccactcgaggaggatgaggaagcgagtctgcagaaa
ggcctcaagtttaaccttatcaacgacaacgtcaatgacagtcccagaatccatctgccc
ctcaactacccacccggaagcccagacctgggccgccactaccgctccaactcccctcta
ccctccatccagctccagccacagtcaccctctgcctccaagaagcaccaggctgttcag
gacctccctgccaccaacacctttgtgggaacaggcgacaacaactccacgggctccgac
caatattcggattacagctacaaggccaacccacccaaatacagcaacaaacaggtagga
gagtacgcaaacacgccagtgtaccacaggaacatctattggaccaacggggtgtggtag
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