Betta splendens (Siamese fighting fish): 114864439
Help
Entry
114864439 CDS
T08231
Symbol
sh3tc2
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 2 isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bspl04131
]
114864439 (sh3tc2)
Membrane trafficking [BR:
bspl04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
114864439 (sh3tc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_8
TPR_2
TPR_1
SH3_2
SH3_1
SH3_9
TPR_10
TPR_MalT
TPR_7
TPR_5
Motif
Other DBs
NCBI-GeneID:
114864439
NCBI-ProteinID:
XP_029021128
UniProt:
A0A6P7NT24
LinkDB
All DBs
Position
10:8018550..8031386
Genome browser
AA seq
1542 aa
AA seq
DB search
MALISGSCRRLGQMASCCCRPLLNSSCCGPLIKVCLSSFTDISPAELDALWREPPYTLGG
ASQHFPGNDIMTQGVGEEEDGPAAESGDAGPEPDNYWKKKAAFLRGSTVSLGDKFSSEIA
LLFTGRRRSSQNPDRALQEALRTRLRVVESNSQDVIQLFKDLSARLVSVHAEKDSFVLTF
KTVEEIWKFSTYLALGYVARCLENFLCDQSFWLDPVLLSDLEINVSVDEEHLATLYLDLV
LQEGSFFAKALFTRRERDEDDEEQLPFKKNDLLMVKDTGQENMWEGTMLATGTHGLVPVN
AMQPLPYPFYQWFLRKYQGYAGCSPTEKEPHAHPVVTGSCVAVVDYSPVWPDELQLSQGD
TVEIQGLLVRGLGVFIGKNTSTGNTGFVHKAHVKPLDTVPLNGQLVFLTEEERSSLAHIN
LCDSESSDSSLLERLFPSDVSSVYRLDRLDETDFMFIRHQPKHVKFPTSTRQSVMSEKSD
GTSPHHSSPRLSSRHSHEPLPREGERLSFSLEETFRELDEFQVDLPLFLEENSWEGEESE
LSDPTLALLNHQHFQDDFLPLYDLHYSFLWLTFPGRTEDELSGHLESVRESAKRTGMHWA
HRRACFLLGRLCAKKLKFSQARVYYEEALSVSVDSFADAPLLVALLTNITAVYLKQRMTD
RLPRTLEKAGALLLCLPGHTFTSADELELLKLLLRRSLVAGDKHLEARVCYLVSRLFLLL
RKFDDALPFVERLQFLSITLSASEGRPIAPLDLNWLLSWLYHRKYMPHLALASLSLDSRQ
DHSLADAFQRVELFIRNSVRLNPHWKEGTSLLPAPIVIYLQQALALAEMGEDMKTQRDLC
LGLASVYQQHGALDKAVRCAQQAVETGGHINEEEGFEASVLLGWLLVLTGQAEKAQSVLQ
PLLTSLQGTDSPTQRGVIHNLLALCLRKQSRVREAGGHLYSALAISREDGNQRNQALALA
NLGCLALDVGAPWIGERFLVRSLHLFLELWETHIDEEHVQTYLWLGRSYKDQGRSQDSRA
SYEMGLLIALHAKNLHSQMVVAKVLSRLYADMMLYGQSIVYYEHCVSVSRELKDKRLEGE
YLEILSSLYLSLNTEKSSRKSLDYTKQSLRISIDLGKREEESETWLQVGRIYYLIQEDEL
ADMYLQAAVKTALRMNDSHFAMSIYEEAGDVYFKGHRKQFASLPFYRDGSLPFARSIRDL
QSEFRLLGKLSELLMNHGEQEEALQYATLAVEVAGETGVRVNQRAAFHRLASVYYNLQQY
EMAENYYLKSLSLSPAVLQHPSEARYYTKVYCRLGNLTLHKLKDAFDAVGYFHLALAAAL
EDQANPEAQYVVYMKLAEIHSNYMPDAHMCRVYRNRAHNLKRVLSGEESAVAGDGSAEDA
DAESDPNPEKDPGEDMGRAEKHEDSSAPQTIHEGSKCTKANAADNNVKDDQSLCDTEASE
RDTAASHSYSDSIYTESFDTAKEQISDSSSSTDTLQTYQKPTDEKDSDFHKDISTPSQIP
VNHPEDIAGQARNSASEAQDEQSAGSEKTSAKADPDVETFFI
NT seq
4629 nt
NT seq
+upstream
nt +downstream
nt
atggcattgatctctgggagctgccggcgtttgggccagatggcgtcttgttgctgcaga
cctctgctcaactcctcgtgttgtggaccgctcatcaaagtgtgcctctcctccttcaca
gacatctcccccgctgagctggacgctctctggagggaaccaccctacacccttggggga
gcaagccaacacttcccaggaaatgacatcatgactcaaggtgttggtgaggaggaggac
ggtcccgctgcggagtcaggcgatgccgggccggagccggacaactactggaagaaaaaa
gcagcttttctcagaggaagcactgtatcgctaggagacaaattctcctcagaaatcgct
ctcctgttcacggggaggagacgctccagccagaatcccgaccgcgcgctgcaggaagcg
ctgcgcacgcgactgcgggtggtggagagcaacagccaggatgtcatccagctctttaag
gacttgtctgcgcgtctggtgtctgtccacgctgagaaagacagctttgtcctcacattc
aagactgtggaggaaatctggaagttttcaacctacctggcgctgggatacgtggctcgc
tgcttggagaacttcctgtgcgatcagtccttctggctggacccagttctgctcagcgac
ttggagatcaacgtaagtgtggatgaggagcatctggccacactctacctggacctcgtg
ctgcaagaaggatccttctttgcaaaggctctgttcacgagaagggagcgggacgaggac
gacgaggagcagctgccgttcaaaaagaacgacctgctgatggtgaaagacacggggcag
gagaacatgtgggagggcaccatgctggccacgggaacccacggcctggtgccggtcaat
gccatgcagccacttccctatcctttctatcagtggttcctgaggaagtaccagggctac
gctgggtgctcgccaacagagaaggaaccacatgcacatccagttgtgacaggttcctgc
gtggcagtcgtcgactacagtccggtttggccggacgagctccagctgagccaaggtgac
actgtggagattcaggggctgctggtccgaggcctgggcgtgttcataggaaaaaacacc
tccacaggaaacaccggattcgtacacaaggcccacgtcaaacctctggacaccgtgccc
ttaaatggacagttggtcttcctgacggaggaggagagatcgagcctggctcacatcaac
ctatgtgactcggagtcaagcgacagcagcctgctggaaagactcttcccgtccgatgtc
agctctgtgtacaggctagatagactggatgagaccgacttcatgtttatcagacaccag
cctaaacatgtaaagtttcccacaagcacccgtcagagtgtgatgtcggagaagagcgac
gggacgtccccccaccactcctcccctcgtctgtccagtcgccactcccacgaacctctg
ccgcgcgagggggagcgcctgtccttcagtctggaggaaaccttcagagagctggacgag
ttccaggtggacctgcctcttttcctggaggagaacagctgggagggggaggagtcggag
ctcagcgaccccacgctggcgctgctcaaccaccagcacttccaggacgacttcctgccc
ctgtatgacctgcactattccttcctgtggctcacctttcccggtaggactgaggacgag
ctgtcaggacatttggagagcgtgagggagagcgccaagcggacgggcatgcactgggcg
catcgacgggcctgtttcctcctggggcgactgtgtgcgaaaaagctgaagttctcccag
gcccgcgtgtactacgaggaggccctgagcgttagcgtggacagtttcgccgacgcgccg
ctcctcgtcgcgctcctcaccaacatcaccgccgtctacctgaagcagcgcatgacggac
aggctgccccggaccctggagaaggccggcgcgctgctcctctgcctccccggtcacacc
ttcacctctgccgacgagctcgagctgctgaagctcctcttgaggaggtcgctggtggcc
ggtgacaagcacctggaggctcgcgtctgctacctcgtctcccgcctcttccttctcctc
aggaagtttgacgacgcgctccccttcgtcgagcgcctccagtttctctcaatcaccctc
tccgcgagcgagggccggcccatagctcctctggacctgaactggctgctgagctggctc
taccaccgtaaatacatgcctcatttggcgctagcctctctgagtctagactccaggcag
gaccactcccttgcggacgctttccagagggttgagttgtttatcagaaactctgtgcgc
ctcaacccccactggaaggaagggacctccctgctccccgctcctattgtcatctacctg
cagcaggctctggctttagctgagatgggtgaggacatgaagactcagagggacctctgt
ttgggcttggcctcagtctaccagcagcacggagctttggataaggcagtgcgctgtgct
caacaagctgtggagacggggggccacatcaacgaggaggagggatttgaggcctctgtg
ctgctcgggtggctactggtgttaacaggacaggctgaaaaggcccaaagtgtcctacag
ccgctactcacgtcgctccagggaacagacagcccgacacagagaggagtcatccacaac
ctcctggctctgtgtctaaggaagcagagtcgggtccgggaggctggcggccatctttac
tcggctttggcgatctccagggaggacggtaaccagaggaaccaggccctggcgctagca
aacctgggctgcttggcactggatgtgggggcgccttggataggagaacgcttcttagtc
aggtcgttgcatctgtttttggagctctgggagacccacattgacgaagagcacgtgcag
acctacctgtggctggggaggagctacaaagaccagggcaggagtcaggacagcagggca
tcgtacgaaatggggctacttattgctctacatgccaaaaacctgcacagtcagatggtg
gtggctaaggtgctgagtcggctgtatgctgacatgatgctctatggtcagagtatcgtg
tactatgaacactgcgtgtcagtatccagagaactgaaggacaagaggctggagggagag
tacctggaaatcctcagcagcctgtacctctcgctcaacactgagaaatcatcccgtaag
tctctggactacactaagcagagcctgaggatctccattgatctgggcaagagggaggag
gagtccgagacctggcttcaggtgggacgcatctattacctgatccaggaggacgaactg
gctgacatgtacctgcaggccgcagtgaagacagccctgagaatgaatgactcacacttc
gccatgagcatttacgaggaggctggcgacgtttactttaaaggccacaggaagcagttc
gcctcgctgcctttctacagggatggcagcctgccgttcgcgcggagcatcagggacctg
cagtcggagttccgcctgttgggtaaactgagcgagctgctgatgaaccacggagagcag
gaggaggcgctgcagtacgcaacgctggcggtggaggtcgccggcgaaacaggtgtgcgt
gtgaaccagagggcggccttccaccgcctggcttccgtctactacaacctgcagcagtac
gagatggcagaaaactactacctcaaatccctctccctgagtcctgctgtcctgcaacac
ccatcggaggctcgctactacaccaaggtctactgcagactggggaacctcaccctccac
aaactcaaggatgcttttgatgcggtcggctacttccacttggctctggcggcggcctta
gaggaccaagctaaccccgaggcccagtacgtggtgtacatgaagctggcggagatccac
agcaactacatgcccgacgctcacatgtgccgagtttacaggaaccgggcccacaatctg
aagagggttctgtctggagaggaaagcgctgtcgctggagatggaagcgcggaggatgca
gacgcggagtctgatccgaacccggaaaaggacccgggtgaggatatgggacgcgcagaa
aagcacgaggacagttcggctccacaaaccattcatgaaggctcaaaatgcaccaaagct
aacgctgcagataataatgtgaaagacgatcagagcctgtgtgatacggaggcatcggag
agagacacggcggccagtcactcgtacagtgacagcatttacacggagtccttcgacacg
gcgaaggagcagatctcagactccagcagctccactgacactttacagacctaccagaag
cccaccgacgagaaagactccgacttccacaaggatatcagcacgcctagtcaaatacct
gtcaatcacccagaggacatcgcaggacaggccagaaactctgcttctgaagctcaggac
gaacagagcgccggctctgaaaaaactagcgccaaagcagatcctgatgtagaaacattc
tttatttag
DBGET
integrated database retrieval system
