Betta splendens (Siamese fighting fish): 114865003
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Entry
114865003 CDS
T08231
Symbol
si:ch73-233f7.1
Name
(RefSeq) protocadherin-10 isoform X1
KO
K16499
protocadherin delta 2
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
bspl04515
]
114865003 (si:ch73-233f7.1)
Cell adhesion molecules [BR:
bspl04515
]
Cadherins
Protocadherins
114865003 (si:ch73-233f7.1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_tail
Bact_surface_Ig-like
Motif
Other DBs
NCBI-GeneID:
114865003
NCBI-ProteinID:
XP_029021845
UniProt:
A0A6P7NV01
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Position
10:11332803..11339408
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AA seq
1001 aa
AA seq
DB search
MDHRLSRGSWVPVTGLVISLLLCACVVDLVLAQIRYSIPEELEHGAFVGNIAEDLGLDVA
KLSARRFRIVSGAKKQYLEVNLENGILFVNEKIDREELCERSPGCFLHLQVVIENPLELY
RVEVEILDVNDNSPSFPWSEFNLDITESAAPGSRFPLESAQDQDVGTNSLRSYQLSANEH
FVLNIQTRNDGSKFAELVLDTPLDREQQKRHEMVLTAYDGGAPERSGTALITITVLDAND
NVPVFDRPVYRASLVENAPRGTLVLKLNATDLDEGSNGEVTYAFSGHAPLKVRELFSVDP
YTGEIRVKGTVDYEKAGVYELYVQAKDRGPSAVAVHGKVLVDILDVNDNAPEVILTSVST
PVQEDAPPGTVIAVISVMDRDSGENGNVDCQIPSNVPFQLHSSFKNYYTLVTSEFLDREA
VSEYNITLTARDLGSPALSTRKTILVQVSDINDNPPRFSQPSYTVYVTENNAPGASICSV
TAFDPDSNQNAYLSYSILEGQIQGMPVSTYVSINSDNGNIYALRSFDYEQLRNFQILVQA
QDAGFPPLASNVTVNVFVLDQNDNAPLVVSPLPKNGTVAAEVVPRSVDAGYLVTKITALD
ADAGQNSRLSYQVVQATDPGLFSVALYTGEIRTIRRLVEKDATRHRLVILVKDNGQPPLS
ATVSIVLTVVDSVPESLSDFGDLTLSPQPPSNLALYLIVSLSTISFIFLVAIIVLAAVKC
YKDRESLSGYNLPPLACCCCGGFQPEPPPEVFKKSNLNLQISSAAKVPTNCMEVNGNSSL
SQSYCYKVCLTPESAKSDFMFLKPCSPGSTPRNNEAKSADNAWNAQSRSASVNNGATTPN
ELKQPNTDWTLTKNQNSIKSYNSINMDGTLMRKAMHADPENYVTSMAPGQYWTWGTHMRG
VKEYKMSPSTSGVPSRPWTPRCTPPPQQQQPSIPPHPHPPPDYHHNVYIPGTPSGFCTLR
PTAQRSELDVHNSFSTFGKKRRLQMSPQGEAAIINNDLYND
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atggatcacagactctccagaggaagctgggttccagtaacgggactggttataagtctg
cttctgtgtgcgtgtgtagtggacctggttctagcgcaaattcgctactccatccccgag
gagctggagcacggagctttcgtgggaaacatcgccgaggatctgggcttggatgtggcc
aagttgtccgctcgtcgctttcgcatagtctccggtgcaaagaagcaatatttagaagtc
aacttggagaacggcattctcttcgtcaacgaaaagatagaccgagaggagctgtgtgaa
cgaagcccgggctgttttctacacttacaagtggttattgagaacccattagaactgtat
agagtggaagtggagattttagacgtgaatgacaactcccccagtttcccgtggagcgag
ttcaatctagacatcacggagtctgcggcgcccggctcccgcttcccgttggagagcgcg
caggaccaggacgtcggcaccaattccctgcgctcgtaccagctgagcgcgaacgagcac
ttcgtgctaaatattcagacgcgcaacgacgggagcaagttcgccgagctggtgctggac
accccactggaccgggagcagcagaaacggcacgaaatggtcctgacggcgtacgacggg
ggcgcaccggaacgctccgggacggcgctgataaccatcacggtgttggacgcgaacgac
aacgtgcccgtgttcgaccgcccggtgtaccgggcgagcctggtggagaacgcgcccagg
gggacgctggtgctgaagctgaacgccacggacctcgacgagggctccaacggagaagtc
acctacgcgtttagcggacacgcgccgctcaaggtgcgcgagctgtttagcgttgacccg
tacacgggcgaaatccgagtgaagggcactgtggactatgagaaagccggagtatacgag
ctgtatgtgcaggcaaaagacaggggcccctcggctgtggcggtgcacggtaaagtgctg
gtggacatcctggacgtgaacgacaacgcgcccgaggtcatcctgacgtccgtgtccact
cctgtccaggaggatgcgccaccgggcacggtgatcgccgtgatcagcgtcatggatcgg
gactcgggagaaaacggcaacgtcgactgccaaatcccgagcaacgtgcccttccagctc
cattcatcctttaaaaactattacacgctggtgacaagcgagtttctggacagggaagcg
gtgtctgagtacaacatcactctgacagcgcgcgacctgggctcccctgcgctctccacc
aggaaaaccatcctcgtccaagtgtctgacattaacgacaaccccccgcgcttctcgcaa
ccttcctatacagtctatgtgaccgagaataacgccccgggcgcttccatttgctctgta
actgcattcgaccccgattctaaccagaacgcctatctgtcttactctattctcgagggt
cagattcagggcatgcccgtgtctacttatgtttccatcaactcagacaacggcaacatc
tacgcattgcgctcttttgattacgagcaacttcggaactttcagatcctggtgcaggcg
caggacgccggcttcccccctctcgccagcaacgtcaccgtgaacgtgttcgtcttggac
cagaacgacaacgcgcccctcgttgtgtcgcctctgcccaaaaacggcaccgtcgccgcg
gaggtggttccgcgctccgtggacgccgggtatctggtcaccaaaatcacagcgctggac
gcggacgcggggcagaactcgcggctgtcctatcaggtggtgcaggctacggacccgggg
ctgttcagcgtggccctgtacacgggcgaaatcagaactattcgccgactggtggaaaaa
gacgcaaccagacaccggctggtgattttagtcaaggacaacgggcagccgccgctctcc
gccaccgtctctatcgtcctcacagtggtggacagcgtgcccgagtcgctgtccgatttc
ggagacctcacactcagtccgcagcccccgtcgaacctcgctctctatctgatcgtgtca
ctgagcaccatatcgttcattttcctggtggcgatcatcgtgctggcggcggtgaagtgt
tataaggaccgggagagtctgagcggctacaacctgccgccgctcgcctgttgctgctgc
ggggggtttcagcccgagccgccgccggaggtcttcaaaaaatccaacctcaacttgcag
atttcgtcggcggccaaagtgcccacgaactgcatggaggtgaatggaaacagcagtctc
tctcagtcatattgttataaagtgtgcctgactccagaatccgccaaaagtgactttatg
tttctgaagccatgcagccccggcagcacaccgaggaacaacgaggcgaagagcgcggat
aacgcgtggaacgcgcaaagccggagcgcgtccgtgaacaacggagcaacgactcccaat
gagctgaagcagccaaacaccgactggactcttaccaagaaccagaactccatcaaaagc
tacaactctatcaacatggacggcacactcatgcgtaaagccatgcatgcagacccggaa
aactacgtcacctccatggcaccggggcagtactggacctggggaactcacatgaggggc
gtgaaagaatataaaatgtctccttcaaccagtggggtcccttctcgcccgtggactcct
cggtgcacacctcccccgcagcagcagcagccgtccatcccgccccacccccacccgcct
cctgactaccaccacaacgtgtacattcccggaacaccttcgggcttctgcaccctgagg
cccacagcacagcggagcgagctggacgtccacaactccttctccacctttggcaagaag
cggcgtcttcagatgtccccccagggagaggctgcgattataaataatgacttgtacaac
gactga
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