Betta splendens (Siamese fighting fish): 114865431
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Entry
114865431 CDS
T08231
Symbol
arhgef1a
Name
(RefSeq) rho guanine nucleotide exchange factor 1a isoform X1
KO
K12791
Rho guanine nucleotide exchange factor 2
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
114865431 (arhgef1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bspl04131
]
114865431 (arhgef1a)
Membrane trafficking [BR:
bspl04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
114865431 (arhgef1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
C1_1
PH
SOS1_NGEF_PH
C1_2
Prok-RING_1
PHDvar_NSD
PHD
Motif
Other DBs
NCBI-GeneID:
114865431
NCBI-ProteinID:
XP_029022390
UniProt:
A0A6P7NWM3
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All DBs
Position
11:231812..306795
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AA seq
879 aa
AA seq
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MSRVTNLSKLRQERMKEISLRNKERERMREREKAAREREERYSNGHLFTSLTVSGTTLCT
ACNRSITAKEALSCPTCSVTIHNRCRDTLPHCAKMKQRQQKTVLMRNNSALHNVTLRSKN
PGMPERPTSAIYPSDSFRQTLLGSRRGRSSLSLSKSVSTNNIVGNLNDDSPLGLRRILSQ
STDSLSFRARALSVESLNDDGDLYYTSIMEALDLQGQDFKADSWSMAVDSSYLHTHRKND
IKRQDVIYELIQTELHHMRTLYIMERVFRQGMLDELQVDPSTVHAMFPCLNHLIRIHSHF
LAQLLRRHKSSLQPGSSHNYYIHHLGDILLEQFSGQCADDLQKSYAEFCSRHLKALKLYK
ELLARDKRFQCFIRRVSRGPLLRCHGVQECILLVTQRISKYPVLIQRILENTTEDEEEAS
SLAQSLTMVRELLSSIDQQMEDLEKMQRLQEIQCKLDPRAEARVRDGGLFKPIELLRRRL
VHEGTLLWKTPGSRLKDIQVLLMTDILVFLQEKDQKYIFPSMEKPPVVSLQNLIIRDIAN
QERGMFLISDSSPPEMYEFHAASKEDKNIWIRHIQFTVSKLLFRCPSREEFPLIETEYKA
HLRRLKADLKQKDREILELLQERVSLFCELAEATSGQESLQPPVTRYLFRADTPQAPRAE
KLLLDATAEVDRLSELLLGSSVDIPLQCHHKNTDMLETSSKDMFINGARDLCTAKDIYQR
LVNLNVYLHALQGAVIKQDTILELLLQETMMPATSGAWRRLWCDGGNREAIVGSTIGELA
LLQRQHSLLQEELLRLRDAESRFKDSEKARAKLEKQVRHMKIASVEPGRGILTGDDGSEK
PFHLSHGFQGGSDVEVDTSDDDGSISESSKDVQDIPGEI
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgtccagagttactaatctgtcaaaactgcggcaagagaggatgaaggagatcagtcta
cggaataaagaacgagagcgcatgagggagcgagagaaagcagcaagggagagggaagaa
cgttacagcaatggtcacctgtttacttcactgacagtgtcaggaaccacactttgcaca
gcatgtaacaggagtataactgccaaggaggcactcagctgccctacatgcagtgtcact
atccataaccgctgtcgggatactctaccacactgtgccaaaatgaaacaacggcagcag
aagacagtcctgatgcggaataactcagctttgcacaatgtcacactgcgctcaaagaat
ccaggaatgcctgaacgtccaacttcagctatttacccttcggacagctttcgacaaacc
ctgctgggatctcgacgtggtcgctccagtctatcactgtccaaaagtgtctccaccaac
aacattgtaggcaatctgaatgatgactctccgctggggctgcgcaggatcctctcccag
tcaacagactctctaagcttcagggccagagctttgtcagtggagtctctcaatgatgac
ggggacctgtactacacttcaataatggaggcgctagaccttcagggccaggactttaag
gctgactcatggagtatggcagtggacagcagttatttacacacacatcgcaaaaatgac
atcaagcgacaggatgtcatttatgagttgattcaaacagagttgcaccacatgcgaaca
ctgtatatcatggaaagggtgtttcgccagggaatgctggatgagcttcaggtggatccc
agcactgtgcatgccatgttcccttgcttgaatcatctgattaggatacattctcatttt
cttgcacaacttctccgacgccacaaaagcagcctgcagcctgggtcgtcccataactac
tacattcaccacctgggggacatactactagagcagttctcaggccaatgtgcagatgac
ctgcaaaaatcctatgctgagttttgcagccgccacctgaaggctctcaaattgtacaag
gaactgctggccagagacaagaggttccagtgctttatacggcgggtaagccgaggaccc
ttactgcgatgccacggtgtgcaggagtgcatcttgttggtgactcaacgcatctccaag
tatcctgtcctaatccagcgaattctggaaaacaccactgaggatgaggaagaagcctct
tctcttgcccagtccctcacaatggtcagggaacttctaagttcaatagaccagcagatg
gaggatttggagaaaatgcagcggctacaagaaatccagtgcaagttggaccctcgggca
gaggctagagtaagagatggtggactttttaaacccatagaattactccgccggagactt
gtgcatgaaggaacccttctatggaaaaccccaggatcccgactcaaagatatacaggtc
ttattgatgacagacatcctggtgtttctacaggagaaagaccagaagtatatctttcca
agtatggaaaaacccccagtagtgtcccttcagaacctcataataagggacatagcaaat
caggaacgaggtatgttcctcatcagtgactcctctcctcctgagatgtatgagtttcat
gctgcctccaaagaagataagaatatttggatacgtcacatccagttcaccgtcagcaag
ttactatttaggtgtccttcaagagaggagttccccctcatagagactgaatacaaggcc
cacctgagaagacttaaagctgacctaaagcagaaggaccgggagatcttggagcttctg
caggaaagggtctctcttttttgtgagctggcagaggcgacaagtggccaagagagccta
cagccccccgtcactcgatacctgttcagggcagatacaccccaagcccctcgtgcagag
aaactcctactggatgccacagcagaggtggataggttgagtgagctccttctgggttca
agtgtggacatcccgcttcagtgtcatcataaaaacacagacatgttggaaaccagtagt
aaggatatgttcataaatggagcccgtgatttgtgcaccgcaaaggacatctatcagagg
ctggtaaatctcaatgtttaccttcacgcactccagggtgctgtcatcaaacaagacacc
atcctagagttgctgctacaggaaacaatgatgccagctacaagtggagcatggcgtcgt
ctctggtgtgatggtggaaatcgggaggctattgtgggctcaaccataggtgagctggct
cttttgcagagacaacacagcctgctgcaggaggaactgctaaggctgcgggatgccgag
agccggttcaaggacagtgagaaggcccgggccaagctggagaagcaagtccgacacatg
aagattgcatctgtggaaccaggaagggggatcttaacaggagatgacgggagcgagaag
ccattccacttatcacatggctttcagggtggcagtgatgttgaggtggacacgtcagat
gacgatggttcaatatcagaaagctccaaagatgttcaagatattccaggggagatttga
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