Betta splendens (Siamese fighting fish): 114865795
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Entry
114865795 CDS
T08231
Symbol
frem1a
Name
(RefSeq) FRAS1-related extracellular matrix protein 1a isoform X1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114865795 (frem1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
bspl04091
]
114865795 (frem1a)
Lectins [BR:
bspl04091
]
C-Type lectins
Lecticans
114865795 (frem1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Lectin_C
Calx-beta
Motif
Other DBs
NCBI-GeneID:
114865795
NCBI-ProteinID:
XP_029023101
UniProt:
A0A6P7NT68
LinkDB
All DBs
Position
2:16773478..16787325
Genome browser
AA seq
2171 aa
AA seq
DB search
MGALVLTPAWALLPALLLAMTCSTHGTLVKVNKGLKVRRGQSVHLDQSHLLFHIPRQKDA
CKVEVVLNEPITQRVGKLVPQVFDCHFLAEEVKYVHNGCPLLKQDTVKLRLYRFTESETY
VEAFSLHVDIMEPECSIIKLGPKSLEVPEFYGLSDALDGNVVSFHYEKRSSLECSVHLSH
HDTHLPAHGQLVTGEPEKATKRGDEPESFIPIRQKLDNKERAMCKSEDCLKGLKLVKFTK
IRCDDFLVMGLKYQHIDPPSPDIDYIAIRLDLRDTRSGNTYKSEQAWIPVRIAGAIPNQP
PKPSFMSMFILEVDQFILTLLSTATLDAEDEETPKQRLVFNITKPPADGFITHLSDHTHP
VSSFTWLDLNDMLIGYQPPNSSHAQRRNYEVEFEVYDFFFEKSSAIIVHVSVRNADTNAP
RVSWNMGLSLLEGQSRPIKWEQLQIVDNDNLNAVRIITVDGLQHGQLTLRGGKSFMFTVD
DIKAGAVRYHHDDSDSTKDFIVFRITDGRHQTRHKFPIKILPKDDSPPFLITNVLLEVSE
GQTALLRGSTLQASDMDSSDDYILFNITRPPQAGEVMKIPGAGLTGYPVSHFLQRDLSQS
IVYYRHLGNEVFDDSFEVVLSDFHDPPNLSQPQVVVVHIEPVPDQPPKEAPGTSRCLVIK
ETDVVHITRQQLHFVDQESPDSELTYTVTTPPFYTGAHSSPDAGRLFLVDSVAKFAKDSD
APVLRLFTQHAVNFMKVAYMPPMVDVGPYPQFIQFVLSVTNRLGKTVTGICFNVTVTPVD
NQPPQVVTNPLIVEEGGECRLGPEHLLLLDTDSMEEALKVELERGPRHGALQLGGVPLEP
GQAFTVQDLKGLKVRYEHDGSETVEDSIELTATDGTNSAAFVLQVEVTPINDETPVLVAG
LKPVLLCAEGQEIVITVEHIRATDADSDDGGLAFLIARQPRHGAVLRRGRVVDRFVQADV
AAGIVSYRHTGPEIGLAPRHDTVTFVVSDGEMEDAALCCGGGNPQRHRSLPVYDLHITVF
PVDSQPPTLRTGDIFTVDEGGTAPITPSHVKASDADTAVDQLVVSLVSPPQYGYIENVLP
SPGFEKSNMGISIASFSYKDLIDGHVNYVQSRHQRMEPTADQLMLCVSDGKRTSANVAFH
VVIHPKNDEVPEFVVRNITVREGEMKQLDSSVLHAMDLDVPRNVLLFSVVEPPQHGSIVA
RGEQPASRRREAGAPTAVADFTMTDLADGMSLMYVHDDSENTEDSFTLQLTDGRHHVRRQ
VAVKVLPVNDEEPRIIRNGGLEVEPGDARLISSAVLFAQDADTPPAQLAYVFDSVPTQGL
LQLKEGRHWVSLAAGGSCSQDAVDMNLLRYKHTGAHGSRTQDAFAFRLLDGKNQSPPQHF
HISIKDLEKGHIAVFAKPANVSRGDRVVLTTDALLATDGTDRPEELLYVVTRPPAHGQLE
YVKHPGLGISTFSQMDVAANLVAYVHDNRASAPAESFQFVVSNGRTSRNGSFEIAVEMVD
RVLPTLSFNRGLSVPQGSSVILGPDCLGLSDPDTPPGALTFDLVQPPQYGRLLLAGAALS
AGSNFTQRDVQELEVSYKHDGGRSQIDRFAFTASDSSKRGFLLDGRLHTEPMSFTIQIRP
LDRSPPELVRKLPLWKAELLADGRYGIFLSSRELKAQDGDSRDEELRFRIARPPYFGYLE
NITTGGFVSQHFSQMELNKRTIVYIINLDVESLSDSLELTVSDPLGNTAPPQTLEFSWSS
VELSQPRVSVCEGQGAVSLGIIRKGNLAESSYITVKVKELTAVPGKDFLKSPSSLIQFDP
GVSRRSWQAEIIQDDLEEAEEMFEVLLVSPEGTVIGNTHKADVTIRDNGERGPCRPNEAP
VLGGKEVVSDTYPQHGSIQLEKLPLGTESIVLTRGDGLSSEASPQKKTLRVVGSPKSISP
SSVYHNGTDVVYTYHGIMQMQVVDDSSPSTQGRKASVRVASRGAQQQAPTQPHRSKVNSQ
TKLQEPAEALVRADTFIPKPCVPELMGLLHLNQTTNQLFHCNGVSWKPWRPSSQMVSGQT
CPQGWTFHSGRCYILSTERKITWSAASRECKERYRGTLASVLSKGDQDWLWNFSGRRPFW
IGLNDREGRGRWEWAGGEPVVYTNWRKTPPRAGERRSKRCVVVWRRAKWQIRDCRTSKGH
GFVCSVKTRSG
NT seq
6516 nt
NT seq
+upstream
nt +downstream
nt
atgggtgccctggttctgacgccggcctgggccctgcttcccgcgctgctgctggcaatg
acctgctccacgcacgggacgctcgtgaaagtcaacaagggccttaaggtccgacggggc
cagtcggtccacctggaccagagccacctgctgttccatattccccgacagaaggacgcg
tgcaaggtggaggtggtgttgaacgagcccataactcagcgagtggggaaactcgtgcct
caggtatttgactgccacttcctggctgaggaggtgaagtacgtgcacaacggctgccca
ttgttaaagcaggacactgtcaagctgcgtctctacaggtttacggagtcggagacgtac
gtggaggcgttttctctccacgtggacattatggagcctgaatgcagcatcataaagctg
gggcccaaatccttggaggtccccgaattttacggcctctccgatgctctcgacggaaac
gtcgtgtccttccactatgagaagaggtccagtctggagtgtagcgtccacctgagtcac
cacgacacccacctaccggcccacggccaactggtcactggggagccggagaaagccacc
aagagaggggacgagccggagagcttcatcccaatacgccagaagctggacaataaagaa
agggcaatgtgtaaatccgaagactgcctgaaaggcctgaagttagtgaagttcactaaa
atccgctgtgacgacttcctggtgatgggattgaagtatcagcacatagaccctccatct
ccagatatcgactacatcgcaatccgcctggacctcagggacacaaggagcggcaacacc
tataagtctgaacaggcgtggatcccggtgcggatagccggtgccattccgaaccaacct
cccaaaccgtcgttcatgtccatgtttatcctggaagtggaccagttcatcctcacgctg
ctctccaccgcgacgctggacgccgaggacgaagaaacccccaaacagcgcctggtcttc
aacatcaccaaacctcccgccgacggcttcatcactcacctgtcagaccacactcacccg
gtctcctccttcacgtggctggacctcaacgacatgctcatcgggtaccagccgcccaac
tcctcacatgcccagcgcaggaactacgaggtggaattcgaggtttatgattttttcttt
gagaaaagctcagcaataattgtccacgtgtccgtgaggaatgcggacaccaacgccccc
agagtctcctggaacatgggtctcagcctattagaaggacagtctcgcccaataaaatgg
gagcagctgcagattgtggacaacgacaacctgaacgctgttcgcattatcactgtggac
ggcctgcagcatggtcagctcaccctcagaggtggcaagagcttcatgttcaccgtcgac
gacatcaaggccggcgccgttcgctatcaccacgacgacagcgactccaccaaagacttc
atcgtcttccgcatcacggacggccgccatcagacccggcacaagttccccatcaagatc
ctcccgaaggacgacagccccccgttcctcatcaccaacgtgctgctggaggtgtctgag
ggccagaccgccctgctgaggggctccaccctgcaggcctccgacatggactccagcgac
gactacatcctcttcaacatcacccggcccccgcaggctggagaggtcatgaagattcca
ggagccggactcacaggttatcccgtgagccacttcctgcagagggacctgtctcagtcc
atcgtttattaccggcacctcggcaacgaggtgttcgatgattcttttgaggtggtgctg
tcggatttccacgaccccccgaacctgtcgcagcctcaggtcgtagtggttcacatagaa
cctgtcccggaccaaccgcccaaagaggctcctggtaccagccggtgcctcgtgatcaaa
gaaacagatgtggtccacataacgcggcaacagctccacttcgtggaccaggagtctccc
gacagcgagctgacgtacaccgtcactactcctcctttctacaccggcgctcacagcagc
cctgatgcagggaggttgtttctggtggacagcgtcgccaaattcgccaaggactccgat
gctccggtgctaaggctcttcacacagcatgcggtgaacttcatgaaagtagcctacatg
cctcctatggtggacgttggcccgtacccccaattcatccagtttgtcctctctgtgacc
aaccgactgggcaaaacagtcaccggcatctgcttcaacgtcaccgtgacacctgtggac
aaccagcccccacaggtggtcaccaaccctctgattgtggaggaggggggggagtgtcgg
ctgggccccgagcacctactgctgctggacaccgactccatggaggaggctctgaaggtg
gagctggagcgggggccgcggcacggggccctgcagctgggcggcgtgcccctggagcca
ggacaggccttcactgtgcaggacctgaagggcctcaaagtcaggtacgagcacgacggc
tcagagacggtagaggacagcattgaactcactgcaacggatggaaccaattcagccgca
ttcgttctgcaggtggaggtgacgcccattaacgatgagacgccggtgctggttgctggt
ctgaaacccgttctgctctgcgccgaggggcaggagatcgtgatcaccgtggagcacatc
cgcgccaccgacgcggacagcgacgacggcggcctcgccttcctgatcgcgcggcagccg
cgccacggcgcggtgctccgccgcggccgcgtggtcgatcgcttcgtccaggcggacgtc
gccgcggggatcgtcagctaccgacacacagggccggagatcggactcgctccgcgccac
gacacagtcacgtttgtggtttctgacggcgagatggaggacgctgctctgtgctgcggt
ggaggaaacccccagcggcaccgcagcctgcctgtgtacgacctccacatcaccgtgttt
cctgtggacagccagccgccgaccctgagaacaggagacatcttcacagtggatgaagga
ggcaccgcccccataactccttcccacgtcaaggcctctgacgcggacaccgccgtggac
cagctggtggtcagtctggtttccccgccccagtatggctacattgaaaacgtgctgccc
agtcctggcttcgagaaaagcaacatgggcataagcatagcttcgttttcgtacaaagac
ctgatcgacggccatgtgaactacgtgcagtccagacaccagaggatggagcccaccgct
gaccagctcatgctctgcgtgtccgacggcaagcgcacctctgccaacgtcgccttccac
gtcgtgatccaccctaaaaatgacgaggtcccagagtttgtggtccggaacatcacggtg
cgagaaggagaaatgaagcagctggactcgtcggtgttgcacgcgatggacctggacgtc
cccaggaacgtgctgctgttcagcgtggttgaaccccctcagcacggcagcatcgtcgcc
cgcggcgagcagccggcgagccggagacgagaggccggtgccccgaccgccgtggctgac
ttcaccatgaccgacctcgctgacgggatgagcctgatgtacgtgcacgatgactccgag
aacacggaggacagcttcacgctgcagctaacggacggcaggcaccacgtgcgcagacag
gtggcggttaaggtgctgccggtcaatgacgaggagcctcggatcataagaaacggagga
ctggaggtggagccaggagacgcgaggctcatatccagcgcggtcctgttcgctcaggac
gccgacacgccgcctgcacagctcgcgtatgtgtttgacagtgttcccacccaaggactg
ctccagcttaaggaaggtcggcactgggtctcgctggccgccggaggcagctgctcccag
gacgcggtggacatgaacctcctgcgctacaagcacacgggtgcgcacgggtccagaacg
caggacgccttcgcgttccgcctgctggacggaaagaaccagtcgccaccacagcacttc
cacatctccatcaaagacctcgagaaagggcacatcgccgtcttcgcgaagccggcgaac
gtcagcaggggcgaccgcgtggtcctcaccacggacgcgctgctggccacggacggcacg
gacaggcccgaggagctgctgtacgtggtcacccgccccccggctcacggacagctggag
tacgtgaagcaccctgggctgggcatctccaccttcagccagatggacgtggcagcgaac
ctggtggcctatgtccacgacaacagagccagcgcccccgcagagagctttcagttcgtt
gtgagtaacggacggaccagtcgaaacggaagcttcgagatcgcggtggagatggtggat
cgcgtccttccgaccctctccttcaacagaggcctctcggtgcctcagggctcctctgtg
atcctgggtcccgactgcctgggcctctccgatccggacaccccgcccggcgccctgacc
ttcgacctggtgcagccgccgcagtacggccgcctgctcctagcgggcgccgctctgagc
gccggctcgaacttcacacagcgcgacgtgcaggagttggaggtgtcgtacaaacacgac
gggggccgatcgcagatcgatcgatttgccttcaccgcctccgacagcagcaagcgaggt
tttctgctggacggacggctgcacacagaacccatgtccttcactattcagatcaggccg
ctggatcggtcgcctcctgagcttgtgaggaagcttcctctttggaaagctgagctttta
gcggacggacgctacgggatctttctgtcgtctcgggagctgaaggcccaagacggcgac
agcagagacgaggagctgagattccgcatcgctcgtcccccctacttcggctacctcgaa
aacattactacaggtggcttcgtgtcgcagcacttctctcagatggagctgaacaagagg
actatcgtctacatcatcaatctggacgtggagtctctgtccgacagtttggagctcacg
gtgtctgatcctttaggaaacaccgccccccctcaaacactggagttcagctggtctagt
gtggaactgtcccagcctcgggtctctgtgtgtgaggggcagggagctgtttcactgggt
atcattcgaaaaggaaacctggcggagtcctcgtacatcactgtcaaggtcaaggaactg
actgcagtacctggaaaggatttcctcaaaagcccgtcttctctcattcagtttgatcca
ggagtgtcacggaggagctggcaggcagaaatcattcaagatgaccttgaggaggccgag
gagatgtttgaggtgcttctagtctcacctgaaggcacggtgatcggcaacacgcacaag
gctgacgtcactatcagggacaacggggagcgaggaccgtgcagaccgaatgaggctcct
gttcttggagggaaggaagttgtgtcagacacatacccccagcatggatccatccagctg
gagaaactccctctgggcacagaatccatcgtcctgacccgaggagacggcctctcctct
gaagccagcccccagaaaaagacactcagagtcgttggcagcccaaagtctatctctcct
tcttcggtttatcacaatggaacagacgtagtttacacgtatcatggcatcatgcaaatg
caggtagtagacgactcctccccatccacgcagggcaggaaggcaagcgtccgcgtggct
agcaggggggcgcagcagcaggcacccactcagcctcataggtcaaaggtcaattctcag
acaaagctccaggaaccggctgaggcgcttgtgagagctgacaccttcatccctaaacct
tgtgtgcctgagttaatgggacttctccacttaaaccaaaccaccaatcagctcttccac
tgcaacggcgtctcctggaaaccgtggaggccgagtagccagatggtgagtggtcagacg
tgtcctcagggctggaccttccacagtggtcggtgttacatcctcagcactgagcgcaaa
ataacctggagcgcagccagcagagagtgcaaagagaggtacagaggaactttagcaagt
gttctctctaaaggtgaccaggactggctgtggaacttcagtgggaggagaccgttctgg
ataggcctgaatgacagggagggcagggggcgctgggagtgggccgggggcgagccggtg
gtctacaccaactggaggaagacgccaccgcgggcgggagagaggagaagcaaaaggtgc
gtggtggtgtggagaagggcaaagtggcagatcagggactgcaggacgagcaaaggccat
ggcttcgtgtgctcggtcaagactcgatcgggttaa
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integrated database retrieval system
