Betta splendens (Siamese fighting fish): 114866074
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Entry
114866074 CDS
T08231
Name
(RefSeq) collagen alpha-1(XIV) chain-like isoform X1
KO
K08133
collagen type XIV alpha
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
bspl00535
]
114866074
Proteoglycans [BR:
bspl00535
]
Extracellular matrix (ECM) proteoglycans
Others
114866074
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Pur_ac_phosph_N
VWA_3
Motif
Other DBs
NCBI-GeneID:
114866074
NCBI-ProteinID:
XP_029023545
UniProt:
A0A6P7P068
LinkDB
All DBs
Position
11:complement(15591023..15618917)
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AA seq
1729 aa
AA seq
DB search
MSITCWVPSAAEDGFMCKTPAIADIVILVDGSWSIGRINFRLVRTFLENLVRAFSVEFDK
TRVGLAQYSGDPRIEWHLNAHTTKQAVIDAVKNLPYKGGNTLTGLALTFIMENSFKAESG
SRSGVPKIGILITDGKSQDDVIPPAQRLREAGIELFAIGVKNADENELKAIASAPAETHV
YNVADFSVMSEIVEGLTKTVCDRVEQLDKQIKGEPAPPPTSVAPPRDLVTSDITARSFRV
KWTHAPGQVEKYRVVYYPASGGQPDEKVVQGTENSVELNYLNSLTEYQVAVFAIYRSSAS
EALRGSATTLALPMVNDLELFDITHSTMRVRWKTAAGASGYMILYAPLTEGDPADEKEVK
VSDSVKEVELEGLTPATEYTVTVYAMYGEEASDPMTSQQTTLPLAPAQNLRFSDVSHSSA
RLAWDSASRKVLSYRVMYVKTNGVQTNEVDVGRVNTWFLKNLTSLTEYTVGVFAIYDEGQ
AEPTTDSFTTKMVPDPLDLKSSDVSPDSFRVSWEHPAPDVVLYRLTWTPTDGGDSEEALV
NGNVNTYLIKGLSPLSEYEVLLAAVYGNEVESDEVVLVETTVERTTSVATTTTTTAAPRF
GVRNMRIDEETTFSMRVSWQPVDSRNVRHYRLSYISARGDRAEETRTVPTGQSSLVLQPL
LSDTEYKVSLTPVYPEGSAPTATRMGRTLPLSAPKNLRVSEEWYNRFRISWDVPPSPTMG
YRVVYQPLSAPGPALETFVGEDVNTMLILNLLSGTEYSVKVIASYTTGSSEALSGKAKTL
HLGVTNLSTYQVRMNGLCSQWQPHRHASSYRAVIESLLNGQKQEATLGGGSSRHCFSGLK
PNTQYKVSVFAQLLDGTEGPAVTAHEKTQPVPTPAPTRPPSTTPLPTIPPAKEVCKAAKA
DLVFLVDGSWSIGDDNFLKIIGFLYSTTGALDRIGPDGTQVAIAQFSDDARTEFKLNSYS
DKEQLLDAINKISYKGGNTKTGRAIQHVKEKIFTVEGGVRRGVPKVLVVLTDGRSQDDVN
KVSKELQMEGHIVFAIGFADADYGELVSIASRPSDRHVFFVDDLDAFKKIEEKLVTFVCE
AATATCPSVPMSGSTTPGFRMMELFGLVEKRYSSISGVSMVPGTFNSFPCFQLHADASLA
QPTRFVHPEGLPSDYTITMLFRLLPNTPQEPFALWEVLNKDREPLVGLILDGGGKTLTFF
NNDYRGDFQTVMFDGPEIRKLFHGSFHKLHVAITKTSAKVMIDCKMVAEKAINAAGNITT
DGLEVLGRMVRSTGNKDNSAPFQLQIFDIVCSTSWANRDKCCELPGLRKEADCPAMPKAC
TCTQDSKGPAGPAGPPGNPGIRGARGDRGEPGPVGPSGPVGETGVPGPQGPPGPQGPSGR
SIIGPPGAPGERGQKGDAGQQGAQGIPGRPGGVGRDGPPGPRGLPGKDGPQGQQGPPGTI
GTPGAPGSPGSTGPPGKQGELGPPGPPGGKGEKGERGDLQSTASVQAIARQVCEQLIQSH
MSRYNSILTHVPSPPVSIRTVPGPPGEPGRQGAPGLQGEQGPPGRPGFPGQNGQNGQPGE
RGQPGEKGDKGASGVGVQGPRGPSGPPGAQGQGRPGTQGPTGRPGNPGSPGRPGVPGPVG
PAGPPGYCDQNSCVGYNVGEDVTDGGAVPPVQLPPSVFQNYGEVEEDDPYRYYQPNYPAP
QPVSPDDPTLALDDLELRSPGVHRRTRSLEEAQGGVGLKRRLKRGRGTN
NT seq
5190 nt
NT seq
+upstream
nt +downstream
nt
atgtccataacatgctgggttccctctgcagctgaagatgggttcatgtgtaagactcca
gccatcgcagacatcgtgatcctggtggatggctcctggagtatcggccgcatcaacttc
cggctggtcaggacgtttctggagaacctggtccgggccttcagcgtggagtttgataag
accagagtcggcttggctcaatacagcggagaccccagaatcgagtggcacctcaacgct
cacaccacgaaacaggctgtgatcgatgctgtgaagaacctgccttataaaggaggcaac
acgctgacaggtctggctctgaccttcatcatggagaacagctttaaggcagagtctgga
tccagatcaggcgttcccaagattggaatcctcatcactgatgggaagtcccaggatgac
gtgattcccccggctcagaggctgagggaagctgggatagagctgtttgccatcggcgta
aaaaacgctgacgagaacgagctgaaggccatcgcctccgcgcccgctgagacacacgtc
tacaacgtggccgacttcagtgtgatgagcgagatcgtggagggtctcaccaagaccgtg
tgcgaccgtgtggagcagctcgacaagcagatcaaaggagaaccggcccccccgcccact
tcggtggctcctcctcgtgatctggtgacctccgacatcacggcgcgcagcttccgggtc
aagtggacccacgcgccgggtcaggtggagaagtaccgcgtggtctactaccctgccagc
ggagggcagccggatgagaaggtggtccaggggacggagaacagtgtggagctcaactac
ctcaactctctgactgagtatcaagtggctgttttcgccatctaccgcagctcagccagt
gaagccctgagaggaagcgccacgacactggctctgcccatggtcaacgacctggagctg
ttcgatatcactcacagcaccatgagggtccgctggaagacggccgccggggcttctggg
tacatgatcctttacgcgcccctgacggagggagaccccgcagatgagaaggaggtgaag
gtctctgactcggtgaaggaggtggagctggagggactgaccccggccaccgagtacacg
gtgaccgtttacgccatgtatggggaggaggccagcgaccccatgaccagccagcagacc
acactgcctctggctccggcccagaacctgcggttctcagacgtcagtcacagctccgcc
cgcctcgcttgggactccgcctccagaaaggtcctcagctaccgcgtcatgtacgtgaag
accaacggcgtccagaccaacgaggtggacgtcggccgcgtgaacacctggttcctgaag
aacctgacctcgctgaccgagtacacggtcggggtgttcgccatctacgacgagggacaa
gctgagcccacgacggacagcttcaccaccaagatggtgcccgacccgctggacctgaag
agcagcgacgtgtccccggacagcttcagggtgtcgtgggagcacccggcgcctgacgtg
gtgctgtaccgactcacctggacgcccaccgacggaggcgacagcgaggaggcgctggtg
aatggaaacgttaacacctacctgataaaaggcctcagcccgctctcggagtacgaagtc
ctgctggccgccgtttatgggaacgaggtggagagcgacgaggtggtgctggtagagacc
acagtggagagaacaacctcggttgcgaccacaaccaccaccacagcagctcctcgcttt
ggtgtgaggaacatgaggatcgatgaggaaaccaccttcagtatgcgcgtgtcctggcag
ccggtggactccaggaacgtccggcactaccggctgagctacatcagtgccaggggcgac
agggcggaggagacgaggacggtgccgaccggtcagagcagcctggttctgcagccgctg
ctgtcggacacggagtacaaggtgtccctcactcccgtttaccccgaggggtcggcgccg
acggccacgcggatgggccgaacacttcctctttcggcgcctaagaacctgcgggtgtct
gaggagtggtacaaccgcttcaggatcagctgggacgttccgccgtcgcccaccatgggc
tacagggtggtgtaccagcctctgtccgctcctggaccagctctggagaccttcgtgggg
gaagacgtgaatacgatgctgattctgaacctgctgagtgggacggagtacagcgtgaag
gtcatcgcctcctacaccaccggctccagtgaagcgctttctgggaaggccaagacgctt
cacctgggcgtcaccaacctgagcacgtaccaggtgaggatgaacggcctgtgcagccag
tggcagccgcaccgacacgccagcagctacagggccgtcatcgagtcgctgctcaacggg
cagaagcaggaggcgactctgggaggaggatccagcagacactgcttcagcggcctgaag
cccaacacgcagtacaaggtcagcgtgttcgctcagctgctggacggaaccgaaggcccg
gcggtgacggcccacgagaagacgcaacccgtccccacgccggcgccgaccaggccgccc
tccaccacgccgctacccacaatcccccctgccaaggaagtctgtaaagcggccaaagca
gacctggtttttctggtcgacggctcctggagcatcggcgatgacaacttcctgaagatc
attggtttcctgtacagcaccaccggcgctctggaccggatcgggccggacggcacccag
gtggccatcgcccagttcagcgacgacgcccgcaccgagttcaagctcaactcctacagc
gacaaggagcagctgctggacgccatcaacaagatcagctacaagggaggaaacaccaag
acaggtcgagccatccagcacgtgaaagagaagatcttcacggtggagggaggggtccgg
aggggggtccccaaagtcctggtggttctgacagacggccggtcccaggacgacgtcaac
aaggtctccaaggagctccagatggaaggccacatcgtgttcgccattggcttcgctgac
gccgactacggggagctggtgagcatcgccagcaggcccagcgacagacacgtcttcttt
gtcgacgacctggacgccttcaagaagatcgaggagaagctggtgacgttcgtgtgcgag
gctgcgacggccacctgtccgtccgtacccatgagcggcagcacgactccagggttccgg
atgatggagctcttcgggctggtggagaagcgctacagcagcatctcgggcgtttccatg
gtaccgggcaccttcaacagcttcccctgcttccagctgcacgccgacgcgtcgctggct
cagccgacgaggttcgtgcatcctgaggggctgccgtcggactacaccatcaccatgctg
ttccggctgctgcccaacactccacaggagcccttcgccctctgggaggtcctcaacaag
gaccgcgagccgctggtgggcctcatcctggacggcggagggaagacgctgacgttcttc
aacaacgactacagaggagacttccagaccgtcatgttcgacggacccgagatcaggaag
cttttccacggcagcttccacaagcttcacgtcgccatcaccaaaaccagcgccaaggtg
atgatcgactgcaagatggtggcagagaaggccatcaacgccgcagggaacatcaccacg
gacgggctggaggttctgggcaggatggtccggtccacagggaacaaagacaactctgcc
ccgttccagctgcagatcttcgacatcgtctgcagcacgtcctgggccaacagggacaaa
tgctgtgaacttcctggtctgaggaaggaggccgactgtccggccatgcccaaagcctgc
acctgcacccaggacagcaaaggccccgctggccccgctggacccccaggaaacccagga
atcagaggagccaggggcgaccgcggagagccgggtccggtgggtccgagtggtccggtg
ggtgaaacgggcgtaccgggaccccaggggcccccaggaccgcagggacccagcgggcgt
tccataataggacccccaggagctccaggagagagaggacagaaaggcgacgccggacaa
caaggagcgcaggggattcctgggcggcccggcggcgtgggcagagacggaccccccgga
cccagaggcctgccaggcaaagacgggccccagggccagcaggggccccccggaaccatc
gggactccaggagctccagggtccccaggaagtacaggccccccaggaaaacaaggagag
ctggggcctccggggcctcctggaggcaaaggcgagaaaggtgaacggggagacctccag
tccactgcgtccgttcaggccatcgccaggcaggtctgcgagcagctgatccagagccac
atgtcgcgttacaactccatcctgacccatgttcccagtccgcccgtgtccatccgcacc
gtgccgggtccccccggagagcccggtcgacagggtgctccagggctgcagggtgaacag
ggacccccaggaagacccggcttcccggggcagaatgggcagaacggccaaccaggagaa
agaggtcagccaggagagaagggcgacaagggagcatcgggggttggagtccaaggcccc
agaggaccttcaggacctcctggtgcacaaggacagggcagacccggcacccagggtcca
acgggtcggcctggaaatcccggatctccgggtcggcctggggtgccaggacctgtgggc
cctgctgggcctccaggctactgtgaccagaactcctgcgtgggctacaacgtgggagag
gatgtcactgatggaggcgctgttcccccagtccaactgccacccagtgtcttccagaac
tacggtgaggtagaggaggacgacccgtaccgctactaccagcccaactacccggccccg
cagccggtgtcacccgacgaccccacgctcgcgctggacgacctcgagctcaggtccccc
ggcgtccaccgtcgaacaaggagcctggaggaggcacaggggggagtcgggttgaagagg
aggctaaagagaggaagagggactaactaa
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integrated database retrieval system
