Betta splendens (Siamese fighting fish): 114866088
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Entry
114866088 CDS
T08231
Name
(RefSeq) CCR4-NOT transcription complex subunit 3-like isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114866088
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bspl03019
]
114866088
Messenger RNA biogenesis [BR:
bspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114866088
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
114866088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF4407
Motif
Other DBs
NCBI-GeneID:
114866088
NCBI-ProteinID:
XP_029023573
UniProt:
A0A6P7NZZ9
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Position
11:complement(15082700..15101757)
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AA seq
929 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVAEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLVENRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQKE
KDEVGAWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKEKQDRIEELKKFIEKHRYHI
RMLETILRMLDNDSVQVEAIRKIKDDVEYYIDSSQDPDFEENEFLYDDLDLEEIPVSLVA
TSPPGPLHMEDEIFQHSSSTPTSTTSSSPIPPSPATCTTENSEDDKKRGRSTDSEVSQSP
VKNGNPCSLLSSSSSSSSSSVSGLTSSSLVSMATITGGGSSGSGGNSHHGSSGGHLSNTS
AGSYSNATQQQPHASAQQQQAKNSFGSSPSVPIINPSTSTNSHPASSASSPPSASTQGFF
TSNSQPQTPSGSTPTSNSLGLSLGLTLGKGGLTSSISTSPMSGGLGLSGMPASLSTMASL
LSSATPAPYAQAAASGAVGSGLPGSLGGVSTTTTNSTVGSIGSGSIAVGGPTSSTGGLLG
AAPCVGSGILGLGSGQSGVQSSLMSPGPIGGLAPGSGVGVIGSNGGSSGSAGSSVGGGSS
SLSVRPPSQQKQNGSTSYSAVVADSTADSALISASQSQSSQPSPLTSAANQPPVFVSVSL
LSKDTGPSLLSSMSLSSSSPSAASFSEAKAAGGAGSLLNGPMSFSHSPDIKPQEPLSTLK
SMAERAALSSGMEGDVPSLHLTPDIFPSSTTAPSGPPPAPQPSLSEVSIPPSLGVCPLGP
VPLSKDQGYQQAMEEAAWTHMPHPSDSERIRQYLMRNPCPTLPFHHQVPPPHSDTVEFYQ
RLSTETLFFIFYYLEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDEYEQGTY
IYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggccgataaaaggaaacttcaaggtgaaatagatcgatgtctgaaaaaagtagcggag
ggagtggagcagtttgaagacatctggcaaaagcttcataatgcagccaatgcaaaccag
aaggagaaatatgaagcagacctcaagaaagagattaagaagcttcagcgtcttcgagac
cagatcaagacgtgggtggcatccaacgagatcaaagacaaaaggcagctagtagaaaac
cgaaaactcatagaaacgcaaatggagcggttcaaggtagtggaaagagaaaccaagacg
aaagcgtactccaaggagggtctgggcctggcccagaaggtggacccggcccagaaggag
aaggatgaggttggagcgtggctaacgaacacgatagacacgctgaacatgcaggtggac
cagtttgaaagcgaagtggagtctctgtctgtccagacgaggaagaagaaaggagacaag
gagaagcaggaccggatcgaggagctgaagaagttcatcgagaagcatcggtaccacatc
cggatgctggagacgatactgaggatgctggacaatgactccgtgcaagtggaagccatc
aggaagatcaaggatgatgtggagtattatatcgactcgtcacaagacccagactttgaa
gaaaatgagtttctttatgatgacctggatctggaggaaattccggtgtcgctggtcgct
acctctccaccgggacccttgcacatggaggatgagatcttccagcactccagcagcacg
cccacctccaccacctcgtcttcacccatccccccctcgcctgcaacttgcactacggag
aactctgaggatgacaagaagagaggacgttccacagacagtgaagtcagtcagtcacct
gtgaagaatggaaacccatgctccttgttatcctcttcctcatcttcttcatcttcctcc
gtctcgggactgacctcatcctcactggtctccatggcgaccatcactgggggaggaagc
agcggctctgggggcaacagtcaccacggctcctcggggggtcacctctccaacacttcc
gctggcagctacagcaacgccacccagcagcagccgcacgcgtcagcacagcagcaacag
gccaaaaactcctttggctcctcgccctcggttcccatcatcaaccctagcacctccacc
aacagccaccccgcctcctcggcctcctctccccccagtgccagcacacagggcttcttc
acgtcgaactcacagccccagactccgtcagggtccacgcccacctccaacagcctgggc
ctcagtctgggcctcactctggggaaagggggcctgaccagctccatcagcaccagcccc
atgtcggggggtctgggcctgtcagggatgccggcatccctgagcaccatggccagcctt
ctgtccagtgccaccccagcaccatacgctcaggcagctgcttcgggcgcggtgggttct
ggcctgccgggctctctgggcggcgtcagcaccaccacaaccaacagcaccgtgggctcc
atcggcagcgggagcatagcagtcggtgggccgacgtcatcgacggggggcctgctggga
gcggcgccgtgtgtgggctcggggattctgggtttgggttctggtcagtcaggggtgcag
tcttccctcatgtcaccgggcccaataggaggtttagctccgggtagcggagtgggagtc
atcggaagcaacggaggcagctcaggatcagcaggaagctcggtgggaggaggaagctcg
tcgctctctgtccgaccaccgagccaacagaagcagaacggtagcaccagttacagtgct
gtggtagcagacagcacggcagactccgccctcattagtgccagccaatcacaaagcagc
caaccctcacctttgacctctgcagccaatcagccaccggtgtttgtttccgtctccctc
ctcagtaaggacacgggccccagtttactgagctctatgagtttgtcgtccagctctccc
tctgctgcctccttcagcgaggccaaagcggccggcggcgccggcagcctgctgaacggg
cccatgtccttctcccactcccccgacatcaagccccaggagcctctgagcaccctgaag
tccatggccgagcgagcagcactcagctcagggatggagggagacgtgccctcgctgcac
ctcaccccagacatcttccccagcagcactacagccccctcgggtccgccgccagcacct
cagccctcgctgtcagaggtcagcatcccgccatcgctgggggtctgcccgctggggccg
gttcccctctccaaagaccaggggtaccagcaggccatggaggaggcggcgtggacgcac
atgccccacccgtccgactccgagaggatcaggcagtacctgatgaggaacccctgcccc
acgctgcctttccaccaccaggtgccacccccccactctgacactgtagagttttaccag
agactttccaccgaaaccctcttcttcatcttttattacctggagggcaccaaggcccag
tatctggcagccaaagccctgaagaagcagtcgtggcgtttccacaccaagtacatgatg
tggtttcagaggcacgaagaacccaagaccattactgatgagtatgagcagggaacatac
atttactttgactatgagaaatggggccagcggaagaaggaaggtttcactttcgagtac
cgatacctcgaggaccgagaccttcaatga
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