Betta splendens (Siamese fighting fish): 114866122
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Entry
114866122 CDS
T08231
Symbol
rxrba
Name
(RefSeq) retinoic acid receptor RXR-beta-A isoform X1
KO
K08525
retinoid X receptor beta
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl03320
PPAR signaling pathway
bspl04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
114866122 (rxrba)
03320 PPAR signaling pathway
114866122 (rxrba)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bspl03000
]
114866122 (rxrba)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
bspl03310
]
114866122 (rxrba)
Transcription factors [BR:
bspl03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
114866122 (rxrba)
Nuclear receptors [BR:
bspl03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
114866122 (rxrba)
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
114866122
NCBI-ProteinID:
XP_029023643
UniProt:
A0A6P7P1U5
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Position
11:complement(14811262..14826109)
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AA seq
470 aa
AA seq
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MGDSRDSRSPDSSSVSSPPSDQHSSPLVPSAAASMTSLPPITSTGVNSPISSIGSPFSVI
SSSLGSPCLPGTPSVGYGPISSPQINSTVSMSGLHAVSSSDDVKPPLGLKQLSSHSPGPM
LSQKRLCSICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCMVDKRQRNRCQ
YCRYQKCLAMGMKREVAKMNDRSVQEERQRNKEREGEVESTSAVNEEMPVEKILEAEMAV
EQKTELHADGSSGGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAG
WNELLIASFSHRSISVKDGILLATGLHVHRNSAHSAGVGAIFDRAHNAEVGAILDRVLTE
LVSKMRDMQMDKSELGCLRAIILFNPDAKGLSNPSEVELLRERVYASLEAYCKHKYPDQQ
GRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLT
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgggagacagtcgagactcccgcagcccagacagttcgtctgtgtcttcccctccatca
gaccagcactcgtccccgctggttccctccgccgccgcttccatgacctccctccctccc
atcacctccaccggggtcaacagccccatcagcagcatcggctcccccttttctgtcatc
agttcctcgctgggctcaccctgcctacctggaacaccgtctgtgggctacggccccatt
agcagcccgcagattaactcaacagtgtcgatgtcggggctccatgcagtgagcagttct
gatgatgtgaaacctccgttgggcttgaagcagctgtcgtcccacagcccagggccaatg
ctttcccagaaacgcctatgctccatctgtggagacagatcctctggtaaacactatggt
gtctacagctgtgagggctgtaaaggcttcttcaagcgaacagtacgcaaagacctgact
tacacctgtcgggacaataaagactgcatggtggataagagacagaggaaccgctgccag
tactgccgctaccagaagtgcctggcgatgggcatgaagagagaagtggccaagatgaac
gacagatctgtccaagaggagcgtcagaggaacaaggagcgagagggcgaggtggagtcc
actagtgcggtgaacgaggaaatgccagtggagaagatattggaggcagagatggccgta
gagcagaagactgagctccatgctgacggaagttcaggcggcagctcgcccaacgacccc
gtcaccaacatctgtcaggcagcagacaagcagctcttcactctggtggagtgggccaag
aggatccctcacttctctgagctgcccctggacgaccaggtcatcctgctccgtgcaggt
tggaacgagctcctgattgcatcattctctcatcgatccatctccgtgaaggatgggatc
ctgctggccaccggcctgcacgtccatcgcaacagtgctcacagtgcaggagttggagcc
atctttgacagggcacacaatgccgaggttggggccatattggacagggttttgacagaa
ctagtgagcaaaatgagagacatgcaaatggacaagtcagagctgggctgccttcgagcc
atcatccttttcaacccagatgccaagggtttgtccaaccccagtgaggtggagctcctg
agggagagggtgtacgcatctcttgaagcttactgcaaacataaataccccgatcagcag
ggcaggtttgccaaactcctcctccgtctcccggcgctgcgctccattggtctaaaatgc
ctggagcacctgttcttcttcaagctgatcggcgacacgcccatcgacaccttcctgatg
gagatgctggaggcgcctcaccagctcacctag
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