Betta splendens (Siamese fighting fish): 114866284
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Entry
114866284 CDS
T08231
Symbol
sfpq
Name
(RefSeq) splicing factor, proline- and glutamine-rich isoform X1
KO
K13219
splicing factor, proline- and glutamine-rich
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bspl01009
]
114866284 (sfpq)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bspl03021
]
114866284 (sfpq)
03041 Spliceosome [BR:
bspl03041
]
114866284 (sfpq)
Protein phosphatases and associated proteins [BR:
bspl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
114866284 (sfpq)
Transcription machinery [BR:
bspl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
114866284 (sfpq)
Spliceosome [BR:
bspl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
114866284 (sfpq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_7
Motif
Other DBs
NCBI-GeneID:
114866284
NCBI-ProteinID:
XP_029023890
UniProt:
A0A6P7P1B4
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All DBs
Position
11:13906440..13920203
Genome browser
AA seq
684 aa
AA seq
DB search
MSRFNNNRIGLGMNHFQPRRGGGPGGPMRGGLMGNPNFRNNPYQNHNQNRRGPDNFNRPL
NQGPHNPQKQQQNQMPIIPPPSPGPALTMKGPMQQQQKPAQQQQEQRKTDPPAAQQKIQS
PPPKPNVSSPQPNQANSSQSDSQLKSPVGNGQQQKQPPQANPKPGPQQGPKPGPQQGPKP
GPQQVPKPGPQQGPKPGPQQVPKPGPQQGPKPGPQQGPKPGPQQGQRTGPHQGQRAGPPN
RGGQMPPKQELEKKATGSDVAQAGGPSKQEFRATLSMLLKPGEKTYTQRCRLFIGNLPND
ITEEHFRKLFAKYGEPSEVFINKSKGFGFIRLESRALAEIAKAELDDTPMKNRPLRVRFA
THSAALAVKNLSPFVSNELLEEAFSQFGMVERAIVIVDDRGRSTGRGVVEFASKPAARKA
LDRCNEGVFLLTTSPRPVIVEPLEQFDDEDGLPEKLAQKNPRYQAEREEPPRFARPGTFE
YEYSKRWKSLDEMEKQQRQQVEKNMREAREKLESEMEDAFHEHQANLLRQDLLRRQEELR
RMEEMHSQEMQKRKEMQLRQEEERRRREEEMIRKREMEEQMRRQREENYRMGNFMDRDRE
MRMNAGGALGMGDMPFGAPNQKFPMGGMGFEGQQGMGPSAGGLMGNEMRNERFAQGGPRG
MGPGNPGYGRVREEFDGPAKKPRF
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgatttaacaataaccgcatcggacttgggatgaatcacttccagccacgtaga
ggcggcgggcctggtggcccgatgcgggggggcctgatgggaaacccaaattttaggaac
aatccctaccagaatcacaaccaaaaccggagaggaccagataactttaacagaccgctc
aaccagggcccacataacccccagaagcaacaacagaaccaaatgccgatcatccctccg
ccgagtcccggcccggctctcaccatgaaaggcccgatgcagcagcaacagaagccggca
cagcaacagcaggagcagcggaaaaccgacccgcccgcggcccagcagaagattcaatca
ccgccgccgaagcctaacgtgagctcccctcaaccgaaccaggccaacagcagtcagagc
gacagccagctgaagtcaccagtgggtaacggacagcagcaaaagcagccaccacaagcg
aacccaaagccgggaccccagcagggcccgaagcctggaccccagcagggcccgaagccg
ggaccccagcaggtcccaaaaccgggaccccagcagggcccgaagccgggaccccagcag
gtcccaaaacccggaccccagcaaggcccgaagcccggaccccagcaaggcccgaagccc
ggacctcaacaaggccaaaggacgggaccccaccagggacagagggcaggaccaccgaac
aggggcggccagatgcccccaaaacaagagctagagaagaaagccacaggcagcgatgtc
gcccaggcaggcggcccgtccaagcaggagttcagagctacactgtccatgctcctgaaa
cctggcgagaagacgtacacacagcggtgccgcctgtttattgggaatctgcccaacgac
atcacagaagaacacttcaggaagctctttgctaaatatggagagcccagcgaggtcttc
atcaacaagagcaaaggctttggcttcattcgattggagtctcgtgcccttgcagagatt
gcaaaagcagagctggatgacacacctatgaaaaaccgccctctgcgtgttcgctttgca
acacattctgcagccttggctgtgaagaatctgtcaccatttgtttccaacgagctcctg
gaagaggccttttcgcagtttgggatggttgagagggccattgtcattgttgacgatcgt
ggccgctccacgggcaggggggttgtggagtttgcttccaaacctgcagcaagaaaagcc
ctggaccggtgcaatgagggtgtcttccttcttaccacatcaccccggcctgtaattgtt
gagccacttgagcagtttgatgatgaagatggtcttccagagaaattagcacagaagaat
cccagatatcaagcagagcgtgaagagcctcctcgttttgctcgccctggcacctttgaa
tatgaatactcaaagcgctggaagtcgctcgatgaaatggaaaagcaacagaggcagcaa
gtggagaagaacatgcgtgaagcccgtgaaaaacttgagagcgaaatggaggatgctttt
cacgagcaccaggctaatctgctccgacaagatttgcttagacggcaggaggaactcagg
cgcatggaggagatgcacagccaggagatgcaaaagagaaaagaaatgcagctcagacaa
gaggaagaacgacgcaggcgtgaagaagagatgattcgcaagagagagatggaagaacag
atgcgtcgtcagcgtgaagaaaattacaggatgggcaacttcatggatagggacagagaa
atgagaatgaatgctggtggagctttaggcatgggtgatatgccctttggtgcccctaac
caaaagtttcccatgggtggaatgggctttgaaggtcaacagggaatgggaccatctgca
ggaggcttaatggggaacgaaatgcgtaatgagcgctttgctcagggcggtcctagggga
atgggtcctggtaaccccgggtacggcagggtccgcgaggagtttgatggtcctgctaag
aaaccccgtttttag
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integrated database retrieval system
