Betta splendens (Siamese fighting fish): 114866554
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Entry
114866554 CDS
T08231
Symbol
vldlr
Name
(RefSeq) very low-density lipoprotein receptor
KO
K20053
very low-density lipoprotein receptor
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bspl04131
]
114866554 (vldlr)
Membrane trafficking [BR:
bspl04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
114866554 (vldlr)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
EGF
Motif
Other DBs
NCBI-GeneID:
114866554
NCBI-ProteinID:
XP_055369512
UniProt:
A0A9W2Y6A9
LinkDB
All DBs
Position
12:complement(13191930..13214579)
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AA seq
844 aa
AA seq
DB search
MVTSAPGIILLPLLICLQHSVNVRGTKTECEANQFQCGNGRCIPTVWQCDGDRDCTDGSD
ENACVKKTCAELDFVCHNGQCVPKRWHCDGEPDCEDGSDENVTICHMRTCHVNEFSCGAG
STQCIPIFWKCDGEKDCDNGEDEVNCGNITCAPNEFTCASGRCISRNFVCNAEDDCGDGS
DELDCSMSSCGPSEFQCGNSSCIPASWVCDDDVDLQDQSDESPSHCGRHPTPPAKCSSSE
MQCQSGECIHKKWRCDGDPDCKDGSDEANCPVQTCGPDQFKCDDGKCILGSRQCNGLREC
ADGSDEINCKNMTQCNGPEKFKCRSGECIEMSKVCNKARDCPDWSDEPIKECNLNECLLN
NGGCSHICKDMVIGFECDCTPGLQLIDHKTCGDINECLNPGICSQICINLKGGYKCECHN
GYQMDPTTGVCKAVGKEPCLIFTNRRDIRRLGLERKEYTQIVEQQRNTVALDADFDQQMI
FWADLGQKAIYSTKLDKRQDTGTHKRVIDNVQTPVGIAVDWIYKHLYWSDLSTKTISVSI
FNGTKQKVLFNRGLKEPASIAVDPLSGFLYWSDWGEPAKIEKSGMNGVDRQVLVATDIQW
PNGITLDLIKGRLYWVDSKLHMLCSVDLNGDNRKKVLQSSDYLAHPFALTVFEDRVFWTD
GENEAIYGANKFTGSDVVTLASNLNDPQDIIVYHELIQLSGTNWCTERGENGGCSYMCLP
APQINKHSPKYTCVCPEGQELAADGLRCRPEANVSTSIQVNSPPRGSAAAWAVLPVLLLA
MAAVGGYLMWRNWQLKNQKSMNFDNPVYLKTTEEDLNIDITRHGANVGHTYPAISIVSTD
DDLS
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atggtcacgtccgcaccgggaatcatcctgctgccgttgctaatatgtctccagcactcc
gtcaacgtccgcggtaccaagacagaatgtgaggccaaccagttccagtgtggaaacggt
cgctgcatcccaaccgtctggcagtgtgacggagacagggactgcactgatggcagtgat
gaaaacgcctgtgttaaaaagacttgtgcagagttggactttgtatgtcacaatggccag
tgtgtcccaaagcggtggcactgtgatggggagccagactgtgaggatgggtctgatgag
aatgtgacaatttgtcatatgaggacgtgtcatgtgaacgaatttagctgcggtgcaggt
tccacccagtgtatccccatcttctggaaatgtgacggagagaaggactgtgataatggc
gaggatgaggtcaactgtggtaacatcacctgtgctccaaatgagttcacgtgtgccagt
gggcgttgcatctcacgaaactttgtgtgcaatgccgaggacgactgtggtgacggttcg
gacgagttggactgttcgatgtcctcctgcggccccagtgaattccagtgtggaaattcg
tcctgtattccagccagctgggtgtgcgacgatgatgttgatttgcaggaccagtctgac
gaatctccctctcattgtggacgtcacccgacgccaccagccaagtgttcttccagcgag
atgcagtgccagtcaggggagtgcattcataagaagtggaggtgtgatggagaccctgat
tgcaaggacggcagtgacgaagcaaactgtcctgtacaaacctgcggaccagatcagttc
aagtgtgatgatggaaaatgtatcctaggcagcagacagtgtaatggcctcagagagtgc
gccgatggatcagacgaaattaactgcaaaaacatgactcagtgtaatgggccagaaaag
ttcaaatgtcgcagcggggagtgtatcgagatgagcaaagtgtgcaacaaggctcgagac
tgtcctgactggagcgacgaacccatcaaagagtgcaatttaaatgaatgtctcctgaac
aatggaggatgctctcacatatgcaaagacatggtgattggctttgagtgtgactgcaca
cctggactgcagctcattgaccacaagacctgtggagatatcaatgagtgtctgaaccct
ggcatctgcagccagatctgcatcaacctgaagggaggatacaaatgtgaatgtcacaat
ggctaccagatggatccaaccactggagtctgcaaggctgttggtaaggagccatgcctg
atctttactaaccgtcgggatattcgtcgtctgggtctggagagaaaggagtatactcag
atagtagagcagcagagaaacacagtggcactggatgcagactttgaccagcagatgatc
ttctgggctgacttgggccagaaggccatatacagcactaagctggacaaaagacaagac
actggcacccataaacgagtaatcgacaatgtccagactcctgtgggtattgctgtggac
tggatctacaaacacctgtattggtctgacctcagcaccaaaaccatttctgtgtccatc
ttcaatgggaccaagcagaaagttctgttcaacaggggcctcaaagaaccagcatccatt
gctgtggatccgttgtctggattcctgtactggtctgactggggtgaacctgcaaagatt
gagaaatctggtatgaacggagtggacagacaggttctggtggcgacagatattcagtgg
cctaatggaatcactcttgacctgatcaaaggcagattatactgggttgactctaagcta
cacatgctctgtagtgtggacttgaatggtgacaacaggaagaaagtcctgcagtcctct
gattacctggctcacccctttgcgctcacagtttttgaggatcgagtcttctggacagac
ggtgaaaatgaagctatttatggtgccaacaagttcacaggctctgatgtagtgacacta
gccagcaacctgaatgacccccaggacatcatagtgtaccatgaacttattcaattgtct
ggaactaactggtgcacagagagaggtgaaaatgggggctgtagctacatgtgtctgcct
gcgccgcaaatcaacaaacactctcctaagtacacctgcgtatgtccagaggggcaggag
ctggctgctgatggcttacgctgcagacctgaagccaatgtaagcacatctattcaagtg
aattccccacctagagggtctgcagctgcctgggctgtgctgcctgtcctgctcctggcg
atggcggcagtaggcggttacttaatgtggcgaaactggcagctgaagaaccagaagagc
atgaactttgacaaccctgtttacctgaagaccacagaagaagacctcaacattgacatc
acccggcacggcgccaatgtgggacatacctatcctgcaatctctatagtgagcacagat
gacgatttatcctga
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