KEGG   Betta splendens (Siamese fighting fish): 114866631
Entry
114866631         CDS       T08231                                 
Symbol
exosc2
Name
(RefSeq) exosome complex component RRP4
  KO
K03679  exosome complex component RRP4
Organism
bspl  Betta splendens (Siamese fighting fish)
Pathway
bspl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bspl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    114866631 (exosc2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bspl03019]
    114866631 (exosc2)
Messenger RNA biogenesis [BR:bspl03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     114866631 (exosc2)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     114866631 (exosc2)
SSDB
Motif
Pfam: RRP4_S1 ECR1_N KH_6 ECR1_N_2 EXOSC1 RRP40_S1
Other DBs
NCBI-GeneID: 114866631
NCBI-ProteinID: XP_029024454
UniProt: A0A6P7P4B1
LinkDB
Position
12:5173896..5176394
AA seq 293 aa
MAVDMRLPTLRKTVALQDAAFDRKDLVVPGDVITSDTGFMRGHGTYVDDEKLTASVAGEV
QRVDKLICVRPLKTRFNGEVGDVVVGRITEVQQKRWKVETNSRLDSVLLLSSVNLPGGEL
RRRSAEDELTMREYLQEGDLISAEVQSVFSDGALSLHTRSLKYGKLGQGVLVQLSPSLIK
RQKTHFHNLPCGASIILGNNGFVWLYPTPGQQEEEAGGFYTSLEPVSLSDREVISRLRNC
LLALAAHKVHLYDTSVLYCYESSLQHQVKDILKPEVMEEIVMLTQQKILEQEG
NT seq 882 nt   +upstreamnt  +downstreamnt
atggctgttgacatgagattaccaactcttcgaaaaacagtggcgctgcaagatgctgct
tttgaccgaaaggatctggtcgtcccgggcgatgttatcacttcagacaccggcttcatg
aggggtcatggtacctatgttgatgacgaaaagctcactgcttcagtcgctggagaagtg
cagagagttgacaagctgatttgtgtcagaccacttaaaaccaggttcaatggagaagtt
ggagatgtggtggttggtagaataacagaggtccaacagaaacgatggaaggtggagact
aactcgagactggactctgtccttttgttgtcctctgtcaatctgcctggaggagagctg
agaagaagatcagcagaagatgagctcactatgcgggaataccttcaggaaggcgatctc
atcagtgcagaggtacagtccgtcttctcagatggagccctgtcacttcacacccgtagc
ttgaagtatggaaaattaggtcaaggagtgctggtacagctttctccttctctcatcaag
aggcaaaaaacacatttccacaatttgccctgtggtgcatccattattcttgggaataat
ggctttgtctggctgtatcccacaccaggacaacaagaggaggaggctgggggcttctac
accagtttggagcctgtcagcctgtctgatcgagaggtgatttcaaggctgagaaactgc
ctgctggctttggctgcacataaggtccatttatatgacaccagtgttctctattgctat
gaatcctcccttcagcaccaggtcaaggatattttgaaaccagaagtgatggaggagatt
gtaatgttgacgcaacagaagattttggagcaagaaggttaa

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