Betta splendens (Siamese fighting fish): 114866631
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Entry
114866631 CDS
T08231
Symbol
exosc2
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114866631 (exosc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bspl03019
]
114866631 (exosc2)
Messenger RNA biogenesis [BR:
bspl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
114866631 (exosc2)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
114866631 (exosc2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
ECR1_N
KH_6
ECR1_N_2
EXOSC1
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
114866631
NCBI-ProteinID:
XP_029024454
UniProt:
A0A6P7P4B1
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Position
12:5173896..5176394
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AA seq
293 aa
AA seq
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MAVDMRLPTLRKTVALQDAAFDRKDLVVPGDVITSDTGFMRGHGTYVDDEKLTASVAGEV
QRVDKLICVRPLKTRFNGEVGDVVVGRITEVQQKRWKVETNSRLDSVLLLSSVNLPGGEL
RRRSAEDELTMREYLQEGDLISAEVQSVFSDGALSLHTRSLKYGKLGQGVLVQLSPSLIK
RQKTHFHNLPCGASIILGNNGFVWLYPTPGQQEEEAGGFYTSLEPVSLSDREVISRLRNC
LLALAAHKVHLYDTSVLYCYESSLQHQVKDILKPEVMEEIVMLTQQKILEQEG
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggctgttgacatgagattaccaactcttcgaaaaacagtggcgctgcaagatgctgct
tttgaccgaaaggatctggtcgtcccgggcgatgttatcacttcagacaccggcttcatg
aggggtcatggtacctatgttgatgacgaaaagctcactgcttcagtcgctggagaagtg
cagagagttgacaagctgatttgtgtcagaccacttaaaaccaggttcaatggagaagtt
ggagatgtggtggttggtagaataacagaggtccaacagaaacgatggaaggtggagact
aactcgagactggactctgtccttttgttgtcctctgtcaatctgcctggaggagagctg
agaagaagatcagcagaagatgagctcactatgcgggaataccttcaggaaggcgatctc
atcagtgcagaggtacagtccgtcttctcagatggagccctgtcacttcacacccgtagc
ttgaagtatggaaaattaggtcaaggagtgctggtacagctttctccttctctcatcaag
aggcaaaaaacacatttccacaatttgccctgtggtgcatccattattcttgggaataat
ggctttgtctggctgtatcccacaccaggacaacaagaggaggaggctgggggcttctac
accagtttggagcctgtcagcctgtctgatcgagaggtgatttcaaggctgagaaactgc
ctgctggctttggctgcacataaggtccatttatatgacaccagtgttctctattgctat
gaatcctcccttcagcaccaggtcaaggatattttgaaaccagaagtgatggaggagatt
gtaatgttgacgcaacagaagattttggagcaagaaggttaa
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