Betta splendens (Siamese fighting fish): 114866758
Help
Entry
114866758 CDS
T08231
Symbol
rxraa
Name
(RefSeq) retinoic acid receptor RXR-alpha-A isoform X1
KO
K08524
retinoid X receptor alpha
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl03320
PPAR signaling pathway
bspl04148
Efferocytosis
bspl04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
114866758 (rxraa)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
114866758 (rxraa)
03320 PPAR signaling pathway
114866758 (rxraa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bspl03000
]
114866758 (rxraa)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
bspl03310
]
114866758 (rxraa)
Transcription factors [BR:
bspl03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
114866758 (rxraa)
Nuclear receptors [BR:
bspl03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
114866758 (rxraa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
Nuc_recep-AF1
zf-C4
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
114866758
NCBI-ProteinID:
XP_029024725
UniProt:
A0A6P7P3U6
LinkDB
All DBs
Position
12:complement(1283973..1354633)
Genome browser
AA seq
501 aa
AA seq
DB search
METKPFLSLGFLKPQCSLAPPMQRGRSGEACSCFSGVCPLHQRRLSSDSSGQVTSSPLGS
PTSHRGMHPSLLSPTSMGPSGSLHSPISSLSSPMNGLASPFSVISSPMGPHSMNSPGMGY
GPSVSPQLNSPMNSVSSTEDIKPPLGLNGVKKFPAQPSGTALSLTKHICAICGDRSSGKH
YGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCVIDKRQRNRCQYCRYQKCLAMGMKREVLL
HAAVQEERQRAKDKNENEVESSSCANEDMPVEKILEAEQAVEPKTETYIESNLGAPSNSP
NDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVK
DGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSK
GLSNPGEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKL
IGDTPIDTFLMEMLEAPHQMT
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccaagccgttcctgtcgctggggttcctgaagccccagtgctcgttggcgccc
cccatgcagcgaggccgctccggcgaggcgtgttcctgtttcagtggcgtgtgccccctc
caccagcgccgtctgtcctcagactcctcaggccaggtgacgtcctcccccctgggctca
cccacgtctcaccgggggatgcacccgtccctgctcagccccacgtccatgggcccgtcc
ggctcgctccactcccccatcagcagcctcagttcccccatgaacggcctggcgtcgccc
ttctctgtgatcagctccccgatgggaccccactccatgaactcgcctgggatgggctac
gggcccagcgtcagcccccagctgaactctccaatgaactcggtcagcagcacggaggac
atcaagcccccgctgggcctcaacggcgtgaagaagttcccggcccagccctcaggcacg
gcgctgtcgctcaccaaacacatctgtgccatctgtggagaccgctcctcaggtaaacac
tatggggtctacagctgcgaaggctgcaaaggcttcttcaagaggacggtgcgcaaagac
ctgacgtacacctgccgcgacaacaaggactgcgtcatcgacaagcgccagcgcaaccgc
tgtcagtactgccgctatcagaagtgtttggccatgggcatgaagagagaagtgttgtta
catgcagccgttcaggaggagcgccagcgagccaaggacaagaacgagaacgaggtggag
tccagcagctgcgccaacgaggacatgccggtggagaagatcctggaggcggagcaggcg
gtggagcccaagacggagacctacatcgagagcaacctgggcgctccgtccaactcgccc
aacgacccggtgacaaacatctgccaggcggctgataaacagctgttcacgctggtggag
tgggccaagaggatcccccacttctctgagctgccgctggacgaccaggtcatcctccta
cgagcaggttggaacgagctgctcattgcgtccttttcgcaccgctccatagccgtgaag
gacgggatcctgttggcgacggggctccacgtgcaccgcaacagcgcccacagcgccgga
gtgggcgccatctttgacagggtgctcacagagctggtgtctaagatgagggacatgcag
atggataagacagaactgggctgcctccgagccatagttctgttcaacccagactccaag
ggcctctccaacccaggcgaggtggaggctctgagggagaaggtctacgcgtccctggag
gcctactgcaaacacaagtaccccgagcagccgggcagattcgccaagctgttgctgcgg
ttaccggcgctgcgctccatcggcctcaagtgtctggagcacctgttcttcttcaagctt
atcggcgacacgcccatcgacacctttctcatggagatgctggaagccccgcatcagatg
acatag
DBGET
integrated database retrieval system
