Betta splendens (Siamese fighting fish): 114866764
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Entry
114866764 CDS
T08231
Symbol
rc3h2
Name
(RefSeq) roquin-2 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bspl03000
]
114866764 (rc3h2)
04121 Ubiquitin system [BR:
bspl04121
]
114866764 (rc3h2)
Transcription factors [BR:
bspl03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
114866764 (rc3h2)
Ubiquitin system [BR:
bspl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
114866764 (rc3h2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
zf_CCCH_4
zf-CCCH_UNK
Prok-RING_4
zf-C3HC4_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
114866764
NCBI-ProteinID:
XP_029024737
UniProt:
A0A6P7NXQ6
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All DBs
Position
12:complement(3861609..3879065)
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AA seq
1153 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDSSGHQPISLGCSHTVCKTCLHKLHRKACPFDQTPISTD
IDLLPVNCALLQLVGAQIPDLQPVSLSSAAEVEHYDVCRVCVEELALYLKPISGAKGVAT
LSPSVLSRPMQRKLVTLVNCQLVEEEGRVRAVRAGRSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEDALKLVLLALEDGSALSRKVLVLFVVQKLEARFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLVHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLTSLRQHLELLANI
DHNPDAPAPSWEELENVLLAVKLVVHGLVEFIQNFSKKSHDTPQPQANSKYKTSMCRDLR
QQGGCPRGTNCTFAHTQDELEKFRLRNKKSSSVTRAFPGVLGKSLTVDGSVHADVSTAAG
QGLKGMGENAAGLTEGVPSLTHPQLISRGPDAIEDLKRAVPNGSSGANGPNGLSSANRTM
LGSTEQKSISPPRTPVSHSSALSPLSAVVRGDGGTAIPKHGQFMLRAPHPPQASELYYQE
HRFAYDTAHYQATSGSYNPSTLHSSHKPCIAHFLRSSNVPESSLQPSIGPLPASYPSDPQ
TLHPPSSSASGYAPHPPRDRMGPPAFHPHPGQPQYGSLAPAHGVYAPLYDSRRVWRPQLY
HREDARSNSLPPEVLHSSVYQPPLRERFNSLDSNYCSGAEHRPGLHRDYGRVPLGYEDLF
RRKQEQWAHHHHHHNTSRPSQSSPIFTIDFGTEHVESGGQCMGCRFSGEESLAHYSPWSC
GTIGPCLSPFEPEALAHSSAHSCSEHSVRFLPQPKELDGNGGVSGAAVGKRWLHSLDHYR
RLKDEDPIIPFSEGPIISKWGAISRASRTGYHTTDPVQATACQSSASTTPINFKDYNPHS
DHSDYRWSSRGSDSSSHSSFLESEQLCAAELHGRRTSISSAEKIVSDRQSHQNAYSRDRA
ESEPDPDRDIELELRALDMEESEHQGIKTQEFLDLASPQSQDASQILPRPCCSPLLSSPV
EEHPQTERASSEKMDAHLLKKMAFRKSLSPGGLVSGSLGVGKLVLRTGPPRLGDTSTRAC
AEMPGTEMLLSGN
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgccagtgcaggcggcccagtggacagagttcctgtcctgccccatctgctacaatgag
tttgacagcagcggccaccagcccatcagcctgggctgctcccacacagtgtgtaagacc
tgcctacacaagctgcaccgcaaggcctgcccctttgaccagacgcccatcagcaccgac
attgacctgctgccggtcaactgtgccctgctgcagctggtcggagctcagatccctgac
ttgcagccagtgagtctcagcagcgccgcagaggtcgagcactatgacgtctgccgggtg
tgtgtagaagagctggctctctacttaaagcctatcagtggagcaaaaggcgtggccacc
ctgagtccgagcgtgctcagtcgacctatgcagaggaagctggtgacgctggtgaactgc
cagctggtggaggaggagggccgcgtgcgggccgtgcgggcgggacgctcgctgggggag
aggacggtcaccgagctcatcctgcagcaccagaacccccagcagctctccgccaacctc
tgggcagctgttagggcgcgtggttgccagttcctgggacccgctatgcaagaggacgcg
ctgaagctggtcctgctggctctggaagacggctcggcgctgtccaggaaggtcctggtt
ttgtttgtcgtgcagaaactggaggcccgcttcccacaggcctccaaaaccagcataggc
cacgtggtgcagctgctctaccgagcgtcctgctttaaggtgaccaaacgtgacgaggac
tcctctctgatgcagctgaaggaggagttccgcacgtacgaggccctcaggagagagcac
gatgctcagattgtccacatcgccatggaggcgggcctgcgcatctcccccgagcagtgg
tcctctctgctgtacggagacctggtccacaagtcacacatgcagtcaatcatcgacaag
ctgcagtctccggagtcgtttgcaaagagcgttcaggagctgacgattgttctgcagagg
accggagaccccgccaacctcacgagtctcagacagcacctggagctactagccaacata
gatcacaacccagacgccccagcaccgtcatgggaggagttggagaatgtgctgctggct
gtgaagctggtcgttcacggactggtggagtttatacagaacttcagcaagaagagccac
gacactccacagccacaggccaacagcaagtataagacgagcatgtgccgagacctccgt
cagcagggcggatgccccagaggaaccaactgtacgttcgcacacacgcaggacgagctg
gagaaatttaggctgaggaacaagaagagcagcagtgtgacgcgtgcgttcccaggggtt
ctgggtaaatccctcaccgtggacggcagcgtccatgcagatgtgtccacggcagcgggg
caggggctcaaagggatgggggagaacgcagccggcctcacagagggagtccccagcctg
actcacccacagcttatctcacgagggcctgacgccatcgaggacttgaagagagcggtg
ccgaatggatccagtggggctaacgggcctaatggactgtctagcgccaacagaaccatg
ctggggtcaacagaacaaaagtccatctcccctcccaggactccagtgagccattcgtca
gcattgtctcctttgagcgccgttgtccggggcgatggcggcaccgccatacccaaacac
ggccagttcatgctccgcgcaccgcatccgcctcaggcgtcggagctgtactatcaggag
caccgcttcgcttacgacacggcccattatcaggcaacatcaggttcctacaacccatct
acacttcactcttcccacaaaccctgcattgctcacttcctccgatcatcaaacgtccca
gaatcctctctgcagccgtccatcggccctttgccagcttcctaccccagtgaccctcaa
acgctgcacccaccctcctcctctgcctcggggtacgctccacacccacctagggatcgc
atgggtcctcctgctttccatccacacccagggcagcctcagtatgggtccctggcccct
gcacatggggtttatgctcccctctatgacagcaggagagtatggaggcctcagctgtac
cacagagaggatgccaggagtaactcgctgcctccagaggtgctacattcctctgtttac
cagcctccactcagggagagattcaactctttagacagcaactactgctctggagccgaa
caccgtccagggctacacagggattatggccgcgttcctctgggctatgaggatctattc
agaaggaagcaggaacagtgggctcatcatcatcaccatcacaacaccagcaggccctcc
cagtcctctcccatcttcactattgattttggaacagagcatgtggagagcggcggtcag
tgcatggggtgcaggttcagcggcgaggaaagtctggctcactactcgccgtggtcctgc
ggcaccatcggcccctgcctcagtccctttgagccagaagcgctcgcacactcctcagcg
cactcctgctccgagcactcggtgagattcctcccgcaaccaaaggagctggacggcaac
ggcggagtgagcggcgccgccgtcgggaagcggtggctgcactcgttggatcactaccgg
cgcttgaaggatgaggatccaatcattccctttagcgaggggcccattatctctaagtgg
ggggccatatccagggcatcacgcacaggctaccacaccacagaccctgtccaagccact
gcctgccagagcagcgccagcaccacacccatcaactttaaagattacaacccccactca
gaccacagtgactacaggtggagctctagagggtccgactcttccagccactccagtttc
ttagagagtgaacagctttgtgctgcagagcttcatggccgtcgaacttcaattagcagc
gccgagaaaatcgtttctgatcgccaaagccatcagaatgcctacagcagggacagggca
gagagcgagccggatccggaccgagacattgagctcgaactgcgtgctctggacatggag
gagtcggagcaccaggggatcaagactcaggagtttttagacttggcctccccacagtct
caggatgcttctcaaatcctcccccgaccctgctgctctcccctcctctcatcccctgta
gaggaacacccccaaaccgagagagcttcgtcagaaaagatggatgctcacctgctgaaa
aagatggccttcaggaagtcactgtctcctggagggttggtttcaggaagtctgggtgtt
ggaaagctggtgctgcgtactggacctccacgactgggggacacttccaccagagcctgt
gctgaaatgcccggtacagagatgctgctcagtgggaactaa
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